RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 NT5C3AQ9H0P0 336 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 FOXP1Q9H334 677 aaPredicted RBP7.79□□□□□ -1.16
CPNE4-208ENST00000511604 SLITRK6Q9H5Y7 841 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 KANSL2Q9H9L4 492 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 PLGRKTQ9HBL7 147 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 CNOT7Q9UIV1 285 aaKnown RBP7.79□□□□□ -1.16
CPNE4-208ENST00000511604 DBR1Q9UK59 544 aaKnown RBP7.79□□□□□ -1.16
CPNE4-208ENST00000511604 DMTF1Q9Y222 760 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 RTCBQ9Y3I0 505 aaKnown RBP7.79□□□□□ -1.16
CPNE4-208ENST00000511604 KAT6BQ8WYB5 2073 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 A0A088AWK7 358 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 TBKBP1A7MCY6 615 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 RASGRF2O14827 1237 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 KLRC4O43908 158 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 TLR2O60603 784 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 GH1P01241 217 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 TFAP2AP05549 437 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 HOXB7P09629 217 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 UBL4AP11441 157 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 IFNAR1P17181 557 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 MZF1P28698 734 aaPredicted RBP7.78□□□□□ -1.16
CPNE4-208ENST00000511604 FOXO4P98177 505 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 RABL6Q3YEC7 729 aaPredicted RBP7.78□□□□□ -1.16
CPNE4-208ENST00000511604 NAALADL2Q58DX5 795 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 IL23RQ5VWK5 629 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 HGSNATQ68CP4 663 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 MFSD5Q6N075 450 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 ZNF530Q6P9A1 599 aaPredicted RBP7.78□□□□□ -1.16
CPNE4-208ENST00000511604 VPS36Q86VN1 386 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 GRAMD2AQ8IUY3 354 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 CRACR2BQ8N4Y2 399 aaPredicted RBP7.78□□□□□ -1.16
CPNE4-208ENST00000511604 ZNF280CQ8ND82 737 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 TTLL11Q8NHH1 800 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 ZFP28Q8NHY6 868 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 PYROXD1Q8WU10 500 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 PRPF18Q99633 342 aaKnown RBP7.78□□□□□ -1.16
CPNE4-208ENST00000511604 NOC4LQ9BVI4 516 aaKnown RBP7.78□□□□□ -1.16
CPNE4-208ENST00000511604 CRNKL1Q9BZJ0 848 aaKnown RBP7.78□□□□□ -1.16
CPNE4-208ENST00000511604 MMRN2Q9H8L6 949 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 AASDHPPTQ9NRN7 309 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 USP40Q9NVE5 1235 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 HOXC10Q9NYD6 342 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 UVRAGQ9P2Y5 699 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 MAGEC2Q9UBF1 373 aaPredicted RBP7.78□□□□□ -1.16
CPNE4-208ENST00000511604 SNX9Q9Y5X1 595 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 SLC12A7Q9Y666 1083 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 IVNS1ABPQ9Y6Y0 642 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 ARHGAP10A1A4S6 786 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 PGRMC1O00264 195 aaKnown RBP7.78□□□□□ -1.16
CPNE4-208ENST00000511604 KRIT1O00522 736 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 RNMTO43148 476 aaKnown RBP7.78□□□□□ -1.16
CPNE4-208ENST00000511604 XPOTO43592 962 aaKnown RBP7.78□□□□□ -1.16
CPNE4-208ENST00000511604 GTPBP6O43824 516 aaPredicted RBP7.78□□□□□ -1.16
CPNE4-208ENST00000511604 SMIM18P0DKX4 95 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 PABPC1P11940 636 aaKnown RBP7.78□□□□□ -1.16
CPNE4-208ENST00000511604 STX2P32856 288 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 HOXD13P35453 343 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 CASP7P55210 303 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 PLCB3Q01970 1234 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 NADK2Q4G0N4 442 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 WDR45BQ5MNZ6 344 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 ADAT2Q7Z6V5 191 aaKnown RBP7.78□□□□□ -1.16
CPNE4-208ENST00000511604 CSGALNACT2Q8N6G5 542 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 SPERTQ8NA61 448 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 MAGEB18Q96M61 343 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 METTL22Q9BUU2 404 aaPredicted RBP7.78□□□□□ -1.16
CPNE4-208ENST00000511604 VTA1Q9NP79 307 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 ZDHHC18Q9NUE0 388 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 RGS17Q9UGC6 210 aaPredicted RBP7.78□□□□□ -1.16
CPNE4-208ENST00000511604 ECM29Q5VYK3 1845 aa7.78□□□□□ -1.16
CPNE4-208ENST00000511604 SOS2Q07890 1332 aaPredicted RBP7.77□□□□□ -1.16
CPNE4-208ENST00000511604 MYH4Q9Y623 1939 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 ANKRD34BA5PLL1 514 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 NOTOA8MTQ0 251 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 GSC2O15499 205 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 AP1G1O43747 822 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 EXOC3O60645 756 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 CCDC22O60826 627 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 TBCAO75347 108 aaKnown RBP7.77□□□□□ -1.17
CPNE4-208ENST00000511604 CLPTM1O96005 669 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 MSL3P1P0C860 447 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 ANPEPP15144 967 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 PTPN2P17706 415 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 POLR2EP19388 210 aaKnown RBP7.77□□□□□ -1.17
CPNE4-208ENST00000511604 GNA11P29992 359 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 MCM7P33993 719 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 MXI1P50539 228 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 ARID5AQ03989 594 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 STK4Q13043 487 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 THOC5Q13769 683 aaKnown RBP7.77□□□□□ -1.17
CPNE4-208ENST00000511604 SEPT6Q14141 434 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 C16orf72Q14CZ0 275 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 RPS6KA1Q15418 735 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 NAB2Q15742 525 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 NPY5RQ15761 445 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 NDUFA5Q16718 116 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 TAF1BQ53T94 588 aaPredicted RBP7.77□□□□□ -1.17
CPNE4-208ENST00000511604 MCF2L2Q86YR7 1114 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 FAM20CQ8IXL6 584 aa7.77□□□□□ -1.17
CPNE4-208ENST00000511604 METTL25Q8N6Q8 603 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms