RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 TGM3Q08188 693 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 CWF19L2Q2TBE0 894 aaKnown RBP5.24□□□□□ -1.57
PTPN13-209ENST00000511467 PPP6R3Q5H9R7 873 aaPredicted RBP5.24□□□□□ -1.57
PTPN13-209ENST00000511467 ITIH5Q86UX2 942 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 WDR75Q8IWA0 830 aaKnown RBP5.24□□□□□ -1.57
PTPN13-209ENST00000511467 TPH2Q8IWU9 490 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 TTLL11Q8NHH1 800 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 THUMPD2Q9BTF0 503 aaKnown RBP5.24□□□□□ -1.57
PTPN13-209ENST00000511467 TRAIPQ9BWF2 469 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 ZFYVE28Q9HCC9 887 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 BCCIPQ9P287 314 aaKnown RBP eCLIP5.24□□□□□ -1.57
PTPN13-209ENST00000511467 DBR1Q9UK59 544 aaKnown RBP5.24□□□□□ -1.57
PTPN13-209ENST00000511467 FBXL5Q9UKA1 691 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 TDRD6O60522 2096 aaKnown RBP5.24□□□□□ -1.57
PTPN13-209ENST00000511467 GLP2RO95838 553 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 INPP5BP32019 993 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 RPL3P39023 403 aaKnown RBP5.24□□□□□ -1.57
PTPN13-209ENST00000511467 PIK3CGP48736 1102 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 SPARCL1Q14515 664 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 KNOP1Q1ED39 458 aaKnown RBP5.24□□□□□ -1.57
PTPN13-209ENST00000511467 SGSM1Q2NKQ1 1148 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 RNF180Q86T96 592 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 ZNF280CQ8ND82 737 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 CNOT6LQ96LI5 555 aaKnown RBP5.24□□□□□ -1.57
PTPN13-209ENST00000511467 ROBO3Q96MS0 1386 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 KIF26BQ2KJY2 2108 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 H3BRJ5 948 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 RRM1P23921 792 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 GPC5P78333 572 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 GTF2IP78347 998 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 PPIL2Q13356 520 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 TMED2Q15363 201 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 INSCQ1MX18 579 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 COBLL1Q53SF7 1204 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 RCOR2Q8IZ40 523 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 ATP11CQ8NB49 1132 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 LINC00301Q8NCQ3 95 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 TTC8Q8TAM2 541 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 JARID2Q92833 1246 aaPredicted RBP5.24□□□□□ -1.57
PTPN13-209ENST00000511467 CEP295NLQ96MC4 621 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 OSBPL1AQ9BXW6 950 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 MTFR1LQ9H019 292 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 KCNQ5Q9NR82 932 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 UXTQ9UBK9 157 aaPredicted RBP5.24□□□□□ -1.57
PTPN13-209ENST00000511467 DDX41Q9UJV9 622 aaKnown RBP5.24□□□□□ -1.57
PTPN13-209ENST00000511467 PCDHGC5Q9Y5F6 944 aa5.24□□□□□ -1.57
PTPN13-209ENST00000511467 NBPF26B4DH59 902 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 CAND2O75155 1236 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 IGHDP01880 384 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 CYBBP04839 570 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 RGS4P49798 205 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 RENBPP51606 427 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 RBP5P82980 135 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 GABPAQ06546 454 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 STAT4Q14765 748 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 ADRM1Q16186 407 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 RHOT1Q8IXI2 618 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 CHCHD4Q8N4Q1 142 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 LZTR1Q8N653 840 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 CCT7Q99832 543 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 STN1Q9H668 368 aaKnown RBP5.23□□□□□ -1.57
PTPN13-209ENST00000511467 XAB2Q9HCS7 855 aaKnown RBP5.23□□□□□ -1.57
PTPN13-209ENST00000511467 GPCPD1Q9NPB8 672 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 BTBD7Q9P203 1132 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 HDAC6Q9UBN7 1215 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 SUN2Q9UH99 717 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 IPPQ9Y573 584 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 ZSCAN5CA6NGD5 496 aaPredicted RBP5.23□□□□□ -1.57
PTPN13-209ENST00000511467 E7ENQ6 273 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 PLSCR1O15162 318 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 PFKFB1P16118 471 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 FDFT1P37268 417 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 HSPA9P38646 679 aaKnown RBP5.23□□□□□ -1.57
PTPN13-209ENST00000511467 CDK8P49336 464 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 CENPCQ03188 943 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 DGKDQ16760 1214 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 RNF187Q5TA31 235 aaPredicted RBP5.23□□□□□ -1.57
PTPN13-209ENST00000511467 CAPRIN2Q6IMN6 1127 aaKnown RBP5.23□□□□□ -1.57
PTPN13-209ENST00000511467 CRLF3Q8IUI8 442 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 ZNF34Q8IZ26 560 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 STX19Q8N4C7 294 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 ATRIPQ8WXE1 791 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 DNAJC25Q9H1X3 360 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 FBXO44Q9H4M3 255 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 ZWILCHQ9H900 591 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 ARMT1Q9H993 441 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 NDUFA13Q9P0J0 144 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 PACSIN2Q9UNF0 486 aaPredicted RBP5.23□□□□□ -1.57
PTPN13-209ENST00000511467 MTMR6Q9Y217 621 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 SLC45A1Q9Y2W3 748 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 KPNA5O15131 536 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 RASA4O43374 803 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 ZRANB2O95218 330 aaKnown RBP eCLIP5.23□□□□□ -1.57
PTPN13-209ENST00000511467 PMLP29590 882 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 PSMC4P43686 418 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.23□□□□□ -1.57
PTPN13-209ENST00000511467 GNA13Q14344 377 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 PDK2Q15119 407 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 TTLL9Q3SXZ7 439 aa5.23□□□□□ -1.57
PTPN13-209ENST00000511467 PRR16Q569H4 304 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms