RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 SMRP1Q8NCR6 262 aa12.76□□□□□ -0.37
SH3RF1-205ENST00000511421 FOXD4L4Q8WXT5 416 aaPredicted RBP12.76□□□□□ -0.37
SH3RF1-205ENST00000511421 RPS6KC1Q96S38 1066 aa12.76□□□□□ -0.37
SH3RF1-205ENST00000511421 CDT1Q9H211 546 aa12.76□□□□□ -0.37
SH3RF1-205ENST00000511421 CD320Q9NPF0 282 aa12.76□□□□□ -0.37
SH3RF1-205ENST00000511421 LARSQ9P2J5 1176 aaKnown RBP12.76□□□□□ -0.37
SH3RF1-205ENST00000511421 TFIP11Q9UBB9 837 aaKnown RBP12.76□□□□□ -0.37
SH3RF1-205ENST00000511421 GDAQ9Y2T3 454 aa12.76□□□□□ -0.37
SH3RF1-205ENST00000511421 BDP1A6H8Y1 2624 aa12.76□□□□□ -0.37
SH3RF1-205ENST00000511421 LILRB3O75022 631 aa12.75□□□□□ -0.37
SH3RF1-205ENST00000511421 BRD1O95696 1058 aa12.75□□□□□ -0.37
SH3RF1-205ENST00000511421 BMS1Q14692 1282 aaKnown RBP12.75□□□□□ -0.37
SH3RF1-205ENST00000511421 PTPN14Q15678 1187 aa12.75□□□□□ -0.37
SH3RF1-205ENST00000511421 SMAD2Q15796 467 aaKnown RBP12.75□□□□□ -0.37
SH3RF1-205ENST00000511421 TAS1R1Q7RTX1 841 aa12.75□□□□□ -0.37
SH3RF1-205ENST00000511421 CEP120Q8N960 986 aa12.75□□□□□ -0.37
SH3RF1-205ENST00000511421 ZBTB45Q96K62 511 aaPredicted RBP12.75□□□□□ -0.37
SH3RF1-205ENST00000511421 ZNF396Q96N95 335 aaPredicted RBP12.75□□□□□ -0.37
SH3RF1-205ENST00000511421 FIZ1Q96SL8 496 aa12.75□□□□□ -0.37
SH3RF1-205ENST00000511421 STK17AQ9UEE5 414 aa12.75□□□□□ -0.37
SH3RF1-205ENST00000511421 STK39Q9UEW8 545 aa12.75□□□□□ -0.37
SH3RF1-205ENST00000511421 CCDC39Q9UFE4 941 aa12.75□□□□□ -0.37
SH3RF1-205ENST00000511421 A0A087X0B3 334 aa12.74□□□□□ -0.37
SH3RF1-205ENST00000511421 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.74□□□□□ -0.37
SH3RF1-205ENST00000511421 SPTLC2O15270 562 aa12.74□□□□□ -0.37
SH3RF1-205ENST00000511421 FAM13AO94988 1023 aa12.74□□□□□ -0.37
SH3RF1-205ENST00000511421 F13A1P00488 732 aa12.74□□□□□ -0.37
SH3RF1-205ENST00000511421 SOD2P04179 222 aa12.74□□□□□ -0.37
SH3RF1-205ENST00000511421 GRM5P41594 1212 aa12.74□□□□□ -0.37
SH3RF1-205ENST00000511421 STRN3Q13033 797 aa12.74□□□□□ -0.37
SH3RF1-205ENST00000511421 STK38Q15208 465 aa12.74□□□□□ -0.37
SH3RF1-205ENST00000511421 ZNF568Q3ZCX4 644 aa12.74□□□□□ -0.37
SH3RF1-205ENST00000511421 MPZL3Q6UWV2 235 aa12.74□□□□□ -0.37
SH3RF1-205ENST00000511421 HAUS6Q7Z4H7 955 aa12.74□□□□□ -0.37
SH3RF1-205ENST00000511421 APBB1IPQ7Z5R6 666 aaPredicted RBP12.74□□□□□ -0.37
SH3RF1-205ENST00000511421 RABGGTAQ92696 567 aa12.74□□□□□ -0.37
SH3RF1-205ENST00000511421 PAAF1Q9BRP4 392 aa12.74□□□□□ -0.37
SH3RF1-205ENST00000511421 HERC2P3Q9BVR0 1158 aa12.74□□□□□ -0.37
SH3RF1-205ENST00000511421 COLEC11Q9BWP8 271 aa12.74□□□□□ -0.37
SH3RF1-205ENST00000511421 PARVGQ9HBI0 331 aa12.74□□□□□ -0.37
SH3RF1-205ENST00000511421 CACNG4Q9UBN1 327 aa12.74□□□□□ -0.37
SH3RF1-205ENST00000511421 FAM50BQ9Y247 325 aa12.74□□□□□ -0.37
SH3RF1-205ENST00000511421 HCFC2Q9Y5Z7 792 aa12.74□□□□□ -0.37
SH3RF1-205ENST00000511421 PPP6R2O75170 966 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 NR1I2O75469 434 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 TOM1L1O75674 476 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 YEATS4O95619 227 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 THP07101 528 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 MCF2P10911 925 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 TUSC3Q13454 348 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 XKR4Q5GH76 650 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 RRAGBQ5VZM2 374 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 ANKRD54Q6NXT1 300 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 LLGL2Q6P1M3 1020 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 SYCE2Q6PIF2 218 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 ALKAL1Q6UXT8 129 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 ZPBP2Q6X784 338 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 ZBTB33Q86T24 672 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 MYCT1Q8N699 235 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 GPR62Q9BZJ7 368 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 S1PR5Q9H228 398 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 PRKAG3Q9UGI9 489 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 TDRD15B5MCY1 1934 aaKnown RBP12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 MYH11P35749 1972 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 CASTOR2A6NHX0 329 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 H0YCG3 227 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 MEFVO15553 781 aaPredicted RBP12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 TRAK2O60296 914 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 KRT18P05783 430 aaKnown RBP12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 CA8P35219 290 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 TXLNAP40222 546 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 ZP2Q05996 745 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 HSP90AA2PQ14568 343 aaPredicted RBP12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 KIAA0319Q5VV43 1072 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 FUT10Q6P4F1 479 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 GJD3Q8N144 294 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 SLC22A17Q8WUG5 538 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 SUSD6Q92537 303 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 CASP10Q92851 521 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 KLHL5Q96PQ7 755 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 PPP1R10Q96QC0 940 aaKnown RBP12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 TCHPQ9BT92 498 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 CCDC94Q9BW85 323 aaPredicted RBP12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 PANK2Q9BZ23 570 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 HAPLN2Q9GZV7 340 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 CHST7Q9NS84 486 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 ADAM28Q9UKQ2 775 aa12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 USP15Q9Y4E8 981 aaPredicted RBP12.73□□□□□ -0.37
SH3RF1-205ENST00000511421 MYMKA6NI61 221 aa12.72□□□□□ -0.37
SH3RF1-205ENST00000511421 C19orf67A6NJJ6 358 aa12.72□□□□□ -0.37
SH3RF1-205ENST00000511421 TBCAO75347 108 aaKnown RBP12.72□□□□□ -0.37
SH3RF1-205ENST00000511421 CNPP09543 421 aaKnown RBP12.72□□□□□ -0.37
SH3RF1-205ENST00000511421 SRGAP2BP0DMP2 458 aa12.72□□□□□ -0.37
SH3RF1-205ENST00000511421 SCP2P22307 547 aa12.72□□□□□ -0.37
SH3RF1-205ENST00000511421 OSTNP61366 133 aa12.72□□□□□ -0.37
SH3RF1-205ENST00000511421 DSG1Q02413 1049 aa12.72□□□□□ -0.37
SH3RF1-205ENST00000511421 MCL1Q07820 350 aa12.72□□□□□ -0.37
SH3RF1-205ENST00000511421 FOXD4L6Q3SYB3 417 aaPredicted RBP12.72□□□□□ -0.37
SH3RF1-205ENST00000511421 GLRA4Q5JXX5 417 aa12.72□□□□□ -0.37
SH3RF1-205ENST00000511421 FOXD4L3Q6VB84 417 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms