RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 EIF3EP60228 445 aaKnown RBP11.2□□□□□ -0.62
NEK1-206ENST00000510533 FMR1Q06787 632 aaKnown RBP eCLIP11.2□□□□□ -0.62
NEK1-206ENST00000510533 CCNI2Q6ZMN8 369 aaPredicted RBP11.2□□□□□ -0.62
NEK1-206ENST00000510533 ANKMY2Q8IV38 441 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 ADSSL1Q8N142 457 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 SYNE4Q8N205 404 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 SH2D3CQ8N5H7 860 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 NEDD1Q8NHV4 660 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 COG4Q9H9E3 785 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 ALG13Q9NP73 1137 aaKnown RBP11.2□□□□□ -0.62
NEK1-206ENST00000510533 PITPNM2Q9BZ72 1349 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 ADORA2BP29275 332 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 NME3Q13232 169 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 RNF219Q5W0B1 726 aaPredicted RBP11.2□□□□□ -0.62
NEK1-206ENST00000510533 MMTAG2Q9BU76 263 aaKnown RBP11.2□□□□□ -0.62
NEK1-206ENST00000510533 SUFUQ9UMX1 484 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 KIF1BO60333 1816 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 MYO3BQ8WXR4 1341 aa11.2□□□□□ -0.62
NEK1-206ENST00000510533 UNC13AQ9UPW8 1703 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 ZNF189O75820 626 aaPredicted RBP11.19□□□□□ -0.62
NEK1-206ENST00000510533 KRT4P19013 534 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 DPYDQ12882 1025 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 RNF135Q8IUD6 432 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 DDIASQ8IXT1 998 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 CELF1Q92879 486 aaKnown RBP11.19□□□□□ -0.62
NEK1-206ENST00000510533 EGFL8Q99944 293 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 EML4Q9HC35 981 aaKnown RBP11.19□□□□□ -0.62
NEK1-206ENST00000510533 TUFT1Q9NNX1 390 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 ZFATQ9P243 1243 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 ARHGAP26Q9UNA1 814 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 CSPG5O95196 566 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 DUOXA2Q1HG44 320 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 RCOR2Q8IZ40 523 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 SRBD1Q8N5C6 995 aaKnown RBP11.19□□□□□ -0.62
NEK1-206ENST00000510533 OR6P1Q8NGX9 317 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 SLC35G2Q8TBE7 412 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 TRIM51Q9BSJ1 452 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 STK33Q9BYT3 514 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 SP110Q9HB58 689 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 GGT7Q9UJ14 662 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 ALDH18A1P54886 795 aaKnown RBP11.19□□□□□ -0.62
NEK1-206ENST00000510533 ACTR2P61160 394 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 DAB2P98082 770 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 SMAD1Q15797 465 aaKnown RBP11.19□□□□□ -0.62
NEK1-206ENST00000510533 PID1Q7Z2X4 250 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 TTLL6Q8N841 843 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 SLC10A4Q96EP9 437 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 UVRAGQ9P2Y5 699 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 SUGT1Q9Y2Z0 365 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 GTPBP10A4D1E9 387 aaKnown RBP11.19□□□□□ -0.62
NEK1-206ENST00000510533 A8MXQ7 604 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 CDH16O75309 829 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 ITIH2P19823 946 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 NMT1P30419 496 aaKnown RBP11.19□□□□□ -0.62
NEK1-206ENST00000510533 PCYT1AP49585 367 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 KDSRQ06136 332 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 NR1I3Q14994 352 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 DALRD3Q5D0E6 543 aaKnown RBP11.19□□□□□ -0.62
NEK1-206ENST00000510533 PODNQ7Z5L7 613 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 ARMC2Q8NEN0 867 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 AGR3Q8TD06 166 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 KIF2CQ99661 725 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 NARFQ9UHQ1 456 aa11.19□□□□□ -0.62
NEK1-206ENST00000510533 USP15Q9Y4E8 981 aaPredicted RBP11.19□□□□□ -0.62
NEK1-206ENST00000510533 PLEKHG2Q9H7P9 1386 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 ENO1P06733 434 aaKnown RBP11.18□□□□□ -0.62
NEK1-206ENST00000510533 MTHFD1LQ6UB35 978 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 EHD2Q9NZN4 543 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 ZHX2Q9Y6X8 837 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 GOLGA8RI6L899 631 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 GALCP54803 685 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 ZC3H12BQ5HYM0 836 aaKnown RBP11.18□□□□□ -0.62
NEK1-206ENST00000510533 AGBL2Q5U5Z8 902 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 TEX2Q8IWB9 1127 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 AGGF1Q8N302 714 aaeCLIP11.18□□□□□ -0.62
NEK1-206ENST00000510533 LZICQ8WZA0 190 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 C7orf25Q9BPX7 421 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 ISCA1Q9BUE6 129 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 RANBP17Q9H2T7 1088 aaKnown RBP11.18□□□□□ -0.62
NEK1-206ENST00000510533 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.18□□□□□ -0.62
NEK1-206ENST00000510533 APEX2Q9UBZ4 518 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 MMP10P09238 476 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 KCNA2P16389 499 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 KCNA4P22459 653 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 SSTR3P32745 418 aaPredicted RBP11.18□□□□□ -0.62
NEK1-206ENST00000510533 P3H1Q32P28 736 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 GANCQ8TET4 914 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 HPS3Q969F9 1004 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 PHF20Q9BVI0 1012 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 TSSK1BQ9BXA7 367 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 ZC4H2Q9NQZ6 224 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 NPHP3-ACAD11A0A0J9YXS1 232 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 UBA6A0AVT1 1052 aaPredicted RBP11.18□□□□□ -0.62
NEK1-206ENST00000510533 RHOBTB3O94955 611 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 PYGLP06737 847 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 FXR1P51114 621 aaKnown RBP eCLIP11.18□□□□□ -0.62
NEK1-206ENST00000510533 TBCCQ15814 346 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 RBBP7Q16576 425 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 LONRF1Q17RB8 773 aa11.18□□□□□ -0.62
NEK1-206ENST00000510533 DNAL1Q4LDG9 190 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms