RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 DHX15O43143 795 aaKnown RBP12.15□□□□□ -0.46
SNF8-207ENST00000509995 NR1I2O75469 434 aa12.15□□□□□ -0.46
SNF8-207ENST00000509995 RHOP08100 348 aa12.15□□□□□ -0.46
SNF8-207ENST00000509995 PSMC3P17980 439 aa12.15□□□□□ -0.46
SNF8-207ENST00000509995 MLLT6P55198 1093 aaPredicted RBP12.15□□□□□ -0.46
SNF8-207ENST00000509995 CDC42EP1Q00587 391 aa12.15□□□□□ -0.46
SNF8-207ENST00000509995 DGKKQ5KSL6 1271 aa12.15□□□□□ -0.46
SNF8-207ENST00000509995 RTP2Q5QGT7 225 aa12.15□□□□□ -0.46
SNF8-207ENST00000509995 VITQ6UXI7 678 aa12.15□□□□□ -0.46
SNF8-207ENST00000509995 CATSPER4Q7RTX7 472 aa12.15□□□□□ -0.46
SNF8-207ENST00000509995 TICAM2Q86XR7 235 aa12.15□□□□□ -0.46
SNF8-207ENST00000509995 CLSTN3Q9BQT9 956 aa12.15□□□□□ -0.46
SNF8-207ENST00000509995 FDXACB1Q9BRP7 624 aaPredicted RBP12.15□□□□□ -0.46
SNF8-207ENST00000509995 COLEC11Q9BWP8 271 aa12.15□□□□□ -0.46
SNF8-207ENST00000509995 INO80BQ9C086 356 aaPredicted RBP12.15□□□□□ -0.46
SNF8-207ENST00000509995 SENP2Q9HC62 589 aa12.15□□□□□ -0.46
SNF8-207ENST00000509995 SCUBE2Q9NQ36 999 aa12.15□□□□□ -0.46
SNF8-207ENST00000509995 AVENQ9NQS1 362 aaPredicted RBP12.15□□□□□ -0.46
SNF8-207ENST00000509995 AGPAT5Q9NUQ2 364 aa12.15□□□□□ -0.46
SNF8-207ENST00000509995 ADAM28Q9UKQ2 775 aa12.15□□□□□ -0.46
SNF8-207ENST00000509995 PCDHB15Q9Y5E8 787 aa12.15□□□□□ -0.46
SNF8-207ENST00000509995 BCLAF3A2AJT9 711 aaKnown RBP12.14□□□□□ -0.47
SNF8-207ENST00000509995 H0Y626 953 aa12.14□□□□□ -0.47
SNF8-207ENST00000509995 ARNTLO00327 626 aa12.14□□□□□ -0.47
SNF8-207ENST00000509995 EXTL3O43909 919 aa12.14□□□□□ -0.47
SNF8-207ENST00000509995 ZNF862O60290 1169 aa12.14□□□□□ -0.47
SNF8-207ENST00000509995 TRIM16O95361 564 aa12.14□□□□□ -0.47
SNF8-207ENST00000509995 SIM1P81133 766 aaPredicted RBP12.14□□□□□ -0.47
SNF8-207ENST00000509995 ELF2Q15723 593 aa12.14□□□□□ -0.47
SNF8-207ENST00000509995 IMMTQ16891 758 aaKnown RBP12.14□□□□□ -0.47
SNF8-207ENST00000509995 UVSSAQ2YD98 709 aa12.14□□□□□ -0.47
SNF8-207ENST00000509995 FAM78AQ5JUQ0 283 aa12.14□□□□□ -0.47
SNF8-207ENST00000509995 AXDND1Q5T1B0 1012 aaPredicted RBP12.14□□□□□ -0.47
SNF8-207ENST00000509995 ZNF410Q86VK4 478 aa12.14□□□□□ -0.47
SNF8-207ENST00000509995 ASB16Q96NS5 453 aa12.14□□□□□ -0.47
SNF8-207ENST00000509995 DUSP15Q9H1R2 295 aaPredicted RBP12.14□□□□□ -0.47
SNF8-207ENST00000509995 SLC32A1Q9H598 525 aa12.14□□□□□ -0.47
SNF8-207ENST00000509995 GABBR1Q9UBS5 961 aa12.14□□□□□ -0.47
SNF8-207ENST00000509995 ABCA7Q8IZY2 2146 aa12.14□□□□□ -0.47
SNF8-207ENST00000509995 USP9XQ93008 2570 aaPredicted RBP12.14□□□□□ -0.47
SNF8-207ENST00000509995 SPAARA0A1B0GVQ0 90 aa12.13□□□□□ -0.47
SNF8-207ENST00000509995 ARL5CA6NH57 179 aa12.13□□□□□ -0.47
SNF8-207ENST00000509995 OATP04181 439 aa12.13□□□□□ -0.47
SNF8-207ENST00000509995 PSAPP07602 524 aa12.13□□□□□ -0.47
SNF8-207ENST00000509995 MLH1P40692 756 aa12.13□□□□□ -0.47
SNF8-207ENST00000509995 CCINQ13939 588 aa12.13□□□□□ -0.47
SNF8-207ENST00000509995 UAP1L1Q3KQV9 507 aa12.13□□□□□ -0.47
SNF8-207ENST00000509995 ZNF746Q6NUN9 644 aaPredicted RBP12.13□□□□□ -0.47
SNF8-207ENST00000509995 SMAP1Q8IYB5 467 aaPredicted RBP12.13□□□□□ -0.47
SNF8-207ENST00000509995 CHCHD4Q8N4Q1 142 aa12.13□□□□□ -0.47
SNF8-207ENST00000509995 DEPDC1BQ8WUY9 529 aa12.13□□□□□ -0.47
SNF8-207ENST00000509995 PIK3R5Q8WYR1 880 aa12.13□□□□□ -0.47
SNF8-207ENST00000509995 UBL7Q96S82 380 aaPredicted RBP12.13□□□□□ -0.47
SNF8-207ENST00000509995 GAD1Q99259 594 aa12.13□□□□□ -0.47
SNF8-207ENST00000509995 CCDC86Q9H6F5 360 aaKnown RBP12.13□□□□□ -0.47
SNF8-207ENST00000509995 UBN1Q9NPG3 1134 aa12.13□□□□□ -0.47
SNF8-207ENST00000509995 PCDHA10Q9Y5I2 948 aa12.13□□□□□ -0.47
SNF8-207ENST00000509995 RAI2Q9Y5P3 530 aa12.13□□□□□ -0.47
SNF8-207ENST00000509995 ATG2BQ96BY7 2078 aa12.13□□□□□ -0.47
SNF8-207ENST00000509995 PLXNB3Q9ULL4 1909 aa12.13□□□□□ -0.47
SNF8-207ENST00000509995 SF3B1O75533 1304 aaKnown RBP eCLIP12.12□□□□□ -0.47
SNF8-207ENST00000509995 THADAQ6YHU6 1953 aa12.12□□□□□ -0.47
SNF8-207ENST00000509995 SLC38A8A6NNN8 435 aa12.12□□□□□ -0.47
SNF8-207ENST00000509995 IPO5O00410 1097 aaKnown RBP12.12□□□□□ -0.47
SNF8-207ENST00000509995 ZNF263O14978 683 aa12.12□□□□□ -0.47
SNF8-207ENST00000509995 KHNYNO15037 678 aaKnown RBP12.12□□□□□ -0.47
SNF8-207ENST00000509995 ADAM12O43184 909 aa12.12□□□□□ -0.47
SNF8-207ENST00000509995 RHOBTB1O94844 696 aa12.12□□□□□ -0.47
SNF8-207ENST00000509995 SOX9P48436 509 aa12.12□□□□□ -0.47
SNF8-207ENST00000509995 SCNN1GP51170 649 aa12.12□□□□□ -0.47
SNF8-207ENST00000509995 PRKCEQ02156 737 aa12.12□□□□□ -0.47
SNF8-207ENST00000509995 PSMD5Q16401 504 aa12.12□□□□□ -0.47
SNF8-207ENST00000509995 UBXN11Q5T124 520 aa12.12□□□□□ -0.47
SNF8-207ENST00000509995 TXNDC11Q6PKC3 985 aa12.12□□□□□ -0.47
SNF8-207ENST00000509995 NIPA1Q7RTP0 329 aa12.12□□□□□ -0.47
SNF8-207ENST00000509995 SYNPOQ8N3V7 929 aa12.12□□□□□ -0.47
SNF8-207ENST00000509995 PGBD1Q96JS3 809 aa12.12□□□□□ -0.47
SNF8-207ENST00000509995 HNRNPABQ99729 332 aaKnown RBP12.12□□□□□ -0.47
SNF8-207ENST00000509995 APOL6Q9BWW8 343 aa12.12□□□□□ -0.47
SNF8-207ENST00000509995 C8orf33Q9H7E9 229 aaPredicted RBP12.12□□□□□ -0.47
SNF8-207ENST00000509995 TCEAL9Q9UHQ7 104 aa12.12□□□□□ -0.47
SNF8-207ENST00000509995 RAXQ9Y2V3 346 aa12.12□□□□□ -0.47
SNF8-207ENST00000509995 KIF26AQ9ULI4 1882 aaPredicted RBP12.12□□□□□ -0.47
SNF8-207ENST00000509995 NCANO14594 1321 aa12.11□□□□□ -0.47
SNF8-207ENST00000509995 PI4KAP42356 2102 aa12.11□□□□□ -0.47
SNF8-207ENST00000509995 WDR27A2RRH5 827 aa12.11□□□□□ -0.47
SNF8-207ENST00000509995 TK2O00142 265 aa12.11□□□□□ -0.47
SNF8-207ENST00000509995 IFIT3O14879 490 aaKnown RBP12.11□□□□□ -0.47
SNF8-207ENST00000509995 ITGA4P13612 1032 aa12.11□□□□□ -0.47
SNF8-207ENST00000509995 SMARCA1P28370 1054 aa12.11□□□□□ -0.47
SNF8-207ENST00000509995 CTHP32929 405 aa12.11□□□□□ -0.47
SNF8-207ENST00000509995 RDXP35241 583 aaKnown RBP12.11□□□□□ -0.47
SNF8-207ENST00000509995 PRSS36Q5K4E3 855 aa12.11□□□□□ -0.47
SNF8-207ENST00000509995 RTL10Q7L3V2 364 aa12.11□□□□□ -0.47
SNF8-207ENST00000509995 RAB44Q7Z6P3 723 aaPredicted RBP12.11□□□□□ -0.47
SNF8-207ENST00000509995 CATIPQ7Z7H3 387 aa12.11□□□□□ -0.47
SNF8-207ENST00000509995 ZNF605Q86T29 641 aa12.11□□□□□ -0.47
SNF8-207ENST00000509995 RHPN2Q8IUC4 686 aa12.11□□□□□ -0.47
SNF8-207ENST00000509995 SMG8Q8ND04 991 aaKnown RBP12.11□□□□□ -0.47
SNF8-207ENST00000509995 LNX1Q8TBB1 728 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms