RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 EP400NLQ6ZTU2 488 aa14.89□□□□□ -0.03
SNF8-206ENST00000509989 SV2BQ7L1I2 683 aa14.89□□□□□ -0.03
SNF8-206ENST00000509989 ZSWIM2Q8NEG5 633 aa14.89□□□□□ -0.03
SNF8-206ENST00000509989 URGCPQ8TCY9 931 aa14.89□□□□□ -0.03
SNF8-206ENST00000509989 MICAL1Q8TDZ2 1067 aa14.89□□□□□ -0.03
SNF8-206ENST00000509989 ZMAT2Q96NC0 199 aaKnown RBP14.89□□□□□ -0.03
SNF8-206ENST00000509989 TCF25Q9BQ70 676 aa14.89□□□□□ -0.03
SNF8-206ENST00000509989 MRPL4Q9BYD3 311 aaKnown RBP14.89□□□□□ -0.03
SNF8-206ENST00000509989 UBE2ZQ9H832 354 aaPredicted RBP14.89□□□□□ -0.03
SNF8-206ENST00000509989 C17orf75Q9HAS0 396 aa14.89□□□□□ -0.03
SNF8-206ENST00000509989 PARVGQ9HBI0 331 aa14.89□□□□□ -0.03
SNF8-206ENST00000509989 GOLGA2P5Q9HBQ8 144 aa14.89□□□□□ -0.03
SNF8-206ENST00000509989 ANKFY1Q9P2R3 1169 aa14.89□□□□□ -0.03
SNF8-206ENST00000509989 RBM19Q9Y4C8 960 aaKnown RBP14.89□□□□□ -0.03
SNF8-206ENST00000509989 A0A1B0GVL5 298 aa14.88□□□□□ -0.03
SNF8-206ENST00000509989 CASTOR2A6NHX0 329 aa14.88□□□□□ -0.03
SNF8-206ENST00000509989 POLR2DO15514 142 aaKnown RBP14.88□□□□□ -0.03
SNF8-206ENST00000509989 EFEMP2O95967 443 aa14.88□□□□□ -0.03
SNF8-206ENST00000509989 MYBP10242 640 aa14.88□□□□□ -0.03
SNF8-206ENST00000509989 KCNA5P22460 613 aa14.88□□□□□ -0.03
SNF8-206ENST00000509989 TXLNAP40222 546 aa14.88□□□□□ -0.03
SNF8-206ENST00000509989 OR1G1P47890 313 aa14.88□□□□□ -0.03
SNF8-206ENST00000509989 ALDH7A1P49419 539 aaKnown RBP14.88□□□□□ -0.03
SNF8-206ENST00000509989 BECN1Q14457 450 aa14.88□□□□□ -0.03
SNF8-206ENST00000509989 COL19A1Q14993 1142 aa14.88□□□□□ -0.03
SNF8-206ENST00000509989 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.88□□□□□ -0.03
SNF8-206ENST00000509989 HLA-CQ95604 372 aa14.88□□□□□ -0.03
SNF8-206ENST00000509989 STRA6Q9BX79 667 aa14.88□□□□□ -0.03
SNF8-206ENST00000509989 COL25A1Q9BXS0 654 aaPredicted RBP14.88□□□□□ -0.03
SNF8-206ENST00000509989 BLZF1Q9H2G9 400 aa14.88□□□□□ -0.03
SNF8-206ENST00000509989 CLDND1Q9NY35 253 aa14.88□□□□□ -0.03
SNF8-206ENST00000509989 LARSQ9P2J5 1176 aaKnown RBP14.88□□□□□ -0.03
SNF8-206ENST00000509989 SERTAD1Q9UHV2 236 aa14.88□□□□□ -0.03
SNF8-206ENST00000509989 TBX20Q9UMR3 447 aa14.88□□□□□ -0.03
SNF8-206ENST00000509989 TBCAO75347 108 aaKnown RBP14.87□□□□□ -0.03
SNF8-206ENST00000509989 PPP1R37O75864 691 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 BMP1P13497 986 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 IDEP14735 1019 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 GRM5P41594 1212 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 SMTNP53814 917 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 GTF2BQ00403 316 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 SPAG1Q07617 926 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 ADAM15Q13444 863 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 CTC1Q2NKJ3 1217 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 DCAF4L1Q3SXM0 396 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 MPZL3Q6UWV2 235 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 CD300LGQ6UXG3 332 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 FAM178BQ8IXR5 827 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 VPS52Q8N1B4 723 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 KCNG4Q8TDN1 519 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 HASPINQ8TF76 798 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 FAM193BQ96PV7 902 aaPredicted RBP14.87□□□□□ -0.03
SNF8-206ENST00000509989 ASB2Q96Q27 587 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 ADPGKQ9BRR6 497 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 GPR62Q9BZJ7 368 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 ZBP1Q9H171 429 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 GOLPH3LQ9H4A5 285 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 KBTBD4Q9NVX7 518 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 CLEC1BQ9P126 229 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 CDH22Q9UJ99 828 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 FAN1Q9Y2M0 1017 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 DOCK6Q96HP0 2047 aa14.87□□□□□ -0.03
SNF8-206ENST00000509989 FRMD3A2A2Y4 597 aa14.86□□□□□ -0.03
SNF8-206ENST00000509989 C2orf71A6NGG8 1288 aa14.86□□□□□ -0.03
SNF8-206ENST00000509989 FAM189A1O60320 539 aa14.86□□□□□ -0.03
SNF8-206ENST00000509989 ALDH2P05091 517 aa14.86□□□□□ -0.03
SNF8-206ENST00000509989 MCF2P10911 925 aa14.86□□□□□ -0.03
SNF8-206ENST00000509989 PDIA4P13667 645 aaKnown RBP14.86□□□□□ -0.03
SNF8-206ENST00000509989 UBE3AQ05086 875 aa14.86□□□□□ -0.03
SNF8-206ENST00000509989 STRN3Q13033 797 aa14.86□□□□□ -0.03
SNF8-206ENST00000509989 SLC10A6Q3KNW5 377 aa14.86□□□□□ -0.03
SNF8-206ENST00000509989 ATL3Q6DD88 541 aa14.86□□□□□ -0.03
SNF8-206ENST00000509989 KANK3Q6NY19 840 aa14.86□□□□□ -0.03
SNF8-206ENST00000509989 ALKAL1Q6UXT8 129 aa14.86□□□□□ -0.03
SNF8-206ENST00000509989 ZNF720Q7Z2F6 126 aa14.86□□□□□ -0.03
SNF8-206ENST00000509989 TMC7Q7Z402 723 aa14.86□□□□□ -0.03
SNF8-206ENST00000509989 DDX53Q86TM3 631 aaKnown RBP14.86□□□□□ -0.03
SNF8-206ENST00000509989 C3orf58Q8NDZ4 430 aa14.86□□□□□ -0.03
SNF8-206ENST00000509989 C18orf25Q96B23 403 aaPredicted RBP14.86□□□□□ -0.03
SNF8-206ENST00000509989 PABPC5Q96DU9 382 aaKnown RBP14.86□□□□□ -0.03
SNF8-206ENST00000509989 TMEM169Q96HH4 297 aa14.86□□□□□ -0.03
SNF8-206ENST00000509989 SPATA32Q96LK8 384 aa14.86□□□□□ -0.03
SNF8-206ENST00000509989 PPP1R10Q96QC0 940 aaKnown RBP14.86□□□□□ -0.03
SNF8-206ENST00000509989 TMEM175Q9BSA9 504 aa14.86□□□□□ -0.03
SNF8-206ENST00000509989 TCHPQ9BT92 498 aa14.86□□□□□ -0.03
SNF8-206ENST00000509989 UBN1Q9NPG3 1134 aa14.86□□□□□ -0.03
SNF8-206ENST00000509989 ENTPD7Q9NQZ7 604 aa14.86□□□□□ -0.03
SNF8-206ENST00000509989 KANSL3Q9P2N6 904 aa14.86□□□□□ -0.03
SNF8-206ENST00000509989 CFAP45Q9UL16 551 aa14.86□□□□□ -0.03
SNF8-206ENST00000509989 BARX2Q9UMQ3 279 aaPredicted RBP14.86□□□□□ -0.03
SNF8-206ENST00000509989 LZTS1Q9Y250 596 aa14.86□□□□□ -0.03
SNF8-206ENST00000509989 C2orf16Q68DN1 1984 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 SMIM28A0A1B0GU29 152 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 ACTN4O43707 911 aaKnown RBP14.85□□□□□ -0.03
SNF8-206ENST00000509989 TOM1L1O75674 476 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 KIF4AO95239 1232 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 CXCL14O95715 111 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 IL9P15248 144 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 PFKFB1P16118 471 aa14.85□□□□□ -0.03
SNF8-206ENST00000509989 HOXD13P35453 343 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms