RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 LRRC15Q8TF66 581 aa19.74■□□□□ 0.75
TPM3-220ENST00000509601 EDAQ92838 391 aa19.74■□□□□ 0.75
TPM3-220ENST00000509601 FBXL18Q96ME1 805 aa19.74■□□□□ 0.75
TPM3-220ENST00000509601 ACO2Q99798 780 aaKnown RBP19.74■□□□□ 0.75
TPM3-220ENST00000509601 ADPGKQ9BRR6 497 aa19.74■□□□□ 0.75
TPM3-220ENST00000509601 POMKQ9H5K3 350 aa19.74■□□□□ 0.75
TPM3-220ENST00000509601 SSX2IPQ9Y2D8 614 aa19.74■□□□□ 0.75
TPM3-220ENST00000509601 MYO10Q9HD67 2058 aa19.73■□□□□ 0.75
TPM3-220ENST00000509601 URODP06132 367 aa19.73■□□□□ 0.75
TPM3-220ENST00000509601 THP07101 528 aa19.73■□□□□ 0.75
TPM3-220ENST00000509601 PLA2G4BP0C869 781 aa19.73■□□□□ 0.75
TPM3-220ENST00000509601 GLUD2P49448 558 aa19.73■□□□□ 0.75
TPM3-220ENST00000509601 GRIN1Q05586 938 aa19.73■□□□□ 0.75
TPM3-220ENST00000509601 DCAF4L1Q3SXM0 396 aa19.73■□□□□ 0.75
TPM3-220ENST00000509601 ARSHQ5FYA8 562 aa19.73■□□□□ 0.75
TPM3-220ENST00000509601 BRAPQ7Z569 592 aa19.73■□□□□ 0.75
TPM3-220ENST00000509601 CABP7Q86V35 215 aa19.73■□□□□ 0.75
TPM3-220ENST00000509601 B3GALT6Q96L58 329 aa19.73■□□□□ 0.75
TPM3-220ENST00000509601 DRC1Q96MC2 740 aa19.73■□□□□ 0.75
TPM3-220ENST00000509601 NECTIN4Q96NY8 510 aa19.73■□□□□ 0.75
TPM3-220ENST00000509601 NT5C3AQ9H0P0 336 aa19.73■□□□□ 0.75
TPM3-220ENST00000509601 C17orf75Q9HAS0 396 aa19.73■□□□□ 0.75
TPM3-220ENST00000509601 KMT5AQ9NQR1 393 aa19.73■□□□□ 0.75
TPM3-220ENST00000509601 DAXXQ9UER7 740 aaPredicted RBP19.73■□□□□ 0.75
TPM3-220ENST00000509601 ADAM28Q9UKQ2 775 aa19.73■□□□□ 0.75
TPM3-220ENST00000509601 GDAQ9Y2T3 454 aa19.73■□□□□ 0.75
TPM3-220ENST00000509601 RBM19Q9Y4C8 960 aaKnown RBP19.73■□□□□ 0.75
TPM3-220ENST00000509601 ABLIM1O14639 778 aa19.72■□□□□ 0.75
TPM3-220ENST00000509601 SLC16A4O15374 487 aa19.72■□□□□ 0.75
TPM3-220ENST00000509601 TADA2AO75478 443 aa19.72■□□□□ 0.75
TPM3-220ENST00000509601 MTHFRP42898 656 aa19.72■□□□□ 0.75
TPM3-220ENST00000509601 RAD51AP2Q09MP3 1159 aa19.72■□□□□ 0.75
TPM3-220ENST00000509601 DMP1Q13316 513 aaPredicted RBP19.72■□□□□ 0.75
TPM3-220ENST00000509601 HSP90AA2PQ14568 343 aaPredicted RBP19.72■□□□□ 0.75
TPM3-220ENST00000509601 SF3A1Q15459 793 aaKnown RBP19.72■□□□□ 0.75
TPM3-220ENST00000509601 ATAT1Q5SQI0 421 aa19.72■□□□□ 0.75
TPM3-220ENST00000509601 TMC5Q6UXY8 1006 aa19.72■□□□□ 0.75
TPM3-220ENST00000509601 GPR65Q8IYL9 337 aa19.72■□□□□ 0.75
TPM3-220ENST00000509601 SPIRE2Q8WWL2 714 aa19.72■□□□□ 0.75
TPM3-220ENST00000509601 AK8Q96MA6 479 aa19.72■□□□□ 0.75
TPM3-220ENST00000509601 TIPINQ9BVW5 301 aa19.72■□□□□ 0.75
TPM3-220ENST00000509601 TARS2Q9BW92 718 aaKnown RBP19.72■□□□□ 0.75
TPM3-220ENST00000509601 NPHP3-ACAD11A0A0J9YXS1 232 aa19.71■□□□□ 0.75
TPM3-220ENST00000509601 CASTOR2A6NHX0 329 aa19.71■□□□□ 0.75
TPM3-220ENST00000509601 PROZP22891 400 aa19.71■□□□□ 0.75
TPM3-220ENST00000509601 IGFBP6P24592 240 aaPredicted RBP19.71■□□□□ 0.75
TPM3-220ENST00000509601 ZXDAP98168 799 aa19.71■□□□□ 0.75
TPM3-220ENST00000509601 USP41Q3LFD5 358 aa19.71■□□□□ 0.75
TPM3-220ENST00000509601 KIAA1841Q6NSI8 718 aa19.71■□□□□ 0.75
TPM3-220ENST00000509601 ALKAL1Q6UXT8 129 aa19.71■□□□□ 0.75
TPM3-220ENST00000509601 GPR149Q86SP6 731 aa19.71■□□□□ 0.75
TPM3-220ENST00000509601 CEP120Q8N960 986 aa19.71■□□□□ 0.75
TPM3-220ENST00000509601 RIPOR3Q96MK2 946 aa19.71■□□□□ 0.75
TPM3-220ENST00000509601 CDT1Q9H211 546 aa19.71■□□□□ 0.75
TPM3-220ENST00000509601 TRIP11Q15643 1979 aa19.7■□□□□ 0.74
TPM3-220ENST00000509601 C2CD4DB7Z1M9 353 aa19.7■□□□□ 0.74
TPM3-220ENST00000509601 SLC26A4O43511 780 aa19.7■□□□□ 0.74
TPM3-220ENST00000509601 PLS3P13797 630 aa19.7■□□□□ 0.74
TPM3-220ENST00000509601 SYT1P21579 422 aa19.7■□□□□ 0.74
TPM3-220ENST00000509601 SP100P23497 879 aaPredicted RBP19.7■□□□□ 0.74
TPM3-220ENST00000509601 XKR4Q5GH76 650 aa19.7■□□□□ 0.74
TPM3-220ENST00000509601 CD300LGQ6UXG3 332 aa19.7■□□□□ 0.74
TPM3-220ENST00000509601 TMEM161BQ8NDZ6 487 aa19.7■□□□□ 0.74
TPM3-220ENST00000509601 CDK5RAP3Q96JB5 506 aa19.7■□□□□ 0.74
TPM3-220ENST00000509601 ZBTB45Q96K62 511 aaPredicted RBP19.7■□□□□ 0.74
TPM3-220ENST00000509601 PPP1R10Q96QC0 940 aaKnown RBP19.7■□□□□ 0.74
TPM3-220ENST00000509601 MRPL4Q9BYD3 311 aaKnown RBP19.7■□□□□ 0.74
TPM3-220ENST00000509601 BLOC1S4Q9NUP1 217 aa19.7■□□□□ 0.74
TPM3-220ENST00000509601 FNIP2Q9P278 1114 aa19.7■□□□□ 0.74
TPM3-220ENST00000509601 PHLPP2Q6ZVD8 1323 aa19.7■□□□□ 0.74
TPM3-220ENST00000509601 VPS37CA5D8V6 355 aaPredicted RBP19.69■□□□□ 0.74
TPM3-220ENST00000509601 KIF4AO95239 1232 aa19.69■□□□□ 0.74
TPM3-220ENST00000509601 BMP15O95972 392 aa19.69■□□□□ 0.74
TPM3-220ENST00000509601 ADH1AP07327 375 aa19.69■□□□□ 0.74
TPM3-220ENST00000509601 UBA7P41226 1012 aa19.69■□□□□ 0.74
TPM3-220ENST00000509601 GRM5P41594 1212 aa19.69■□□□□ 0.74
TPM3-220ENST00000509601 CACNB1Q02641 598 aaPredicted RBP19.69■□□□□ 0.74
TPM3-220ENST00000509601 PTPAQ15257 358 aa19.69■□□□□ 0.74
TPM3-220ENST00000509601 RTP2Q5QGT7 225 aa19.69■□□□□ 0.74
TPM3-220ENST00000509601 LILRA6Q6PI73 481 aa19.69■□□□□ 0.74
TPM3-220ENST00000509601 TRIM67Q6ZTA4 783 aa19.69■□□□□ 0.74
TPM3-220ENST00000509601 RIN2Q8WYP3 895 aaPredicted RBP19.69■□□□□ 0.74
TPM3-220ENST00000509601 SFXN1Q9H9B4 322 aa19.69■□□□□ 0.74
TPM3-220ENST00000509601 KCND2Q9NZV8 630 aa19.69■□□□□ 0.74
TPM3-220ENST00000509601 KCNG1Q9UIX4 513 aa19.69■□□□□ 0.74
TPM3-220ENST00000509601 NR2E1Q9Y466 385 aa19.69■□□□□ 0.74
TPM3-220ENST00000509601 CLIC4Q9Y696 253 aa19.69■□□□□ 0.74
TPM3-220ENST00000509601 SMIM28A0A1B0GU29 152 aa19.68■□□□□ 0.74
TPM3-220ENST00000509601 MEFVO15553 781 aaPredicted RBP19.68■□□□□ 0.74
TPM3-220ENST00000509601 BRD1O95696 1058 aa19.68■□□□□ 0.74
TPM3-220ENST00000509601 C1RP00736 705 aa19.68■□□□□ 0.74
TPM3-220ENST00000509601 SPATA31D3P0C874 917 aa19.68■□□□□ 0.74
TPM3-220ENST00000509601 MYBP10242 640 aa19.68■□□□□ 0.74
TPM3-220ENST00000509601 MAPTP10636 758 aaKnown RBP19.68■□□□□ 0.74
TPM3-220ENST00000509601 RPL17P18621 184 aaKnown RBP19.68■□□□□ 0.74
TPM3-220ENST00000509601 PDCP20941 246 aa19.68■□□□□ 0.74
TPM3-220ENST00000509601 LONP1P36776 959 aaKnown RBP19.68■□□□□ 0.74
TPM3-220ENST00000509601 GLRA4Q5JXX5 417 aa19.68■□□□□ 0.74
TPM3-220ENST00000509601 FAM173BQ6P4H8 233 aa19.68■□□□□ 0.74
TPM3-220ENST00000509601 SPATA31D4Q6ZUB0 917 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms