RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 C2orf16Q68DN1 1984 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 POTEMA6NI47 508 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 LAD1O00515 517 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 C2CD2LO14523 706 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 B4GALT5O43286 388 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 EFEMP2O95967 443 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 ASGR2P07307 311 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 XRCC6P12956 609 aaKnown RBP eCLIP16.13■□□□□ 0.17
HMGCL-208ENST00000509389 LIG1P18858 919 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 CMA1P23946 247 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 AVPR2P30518 371 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 PRPHP41219 470 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 ME1P48163 572 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 SCNN1GP51170 649 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 DSC1Q08554 894 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 TCF15Q12870 199 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 GPR149Q86SP6 731 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 UBALD2Q8IYN6 164 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 KRI1Q8N9T8 703 aaKnown RBP16.13■□□□□ 0.17
HMGCL-208ENST00000509389 ZFP42Q96MM3 310 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 PHOX2BQ99453 314 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 APOL6Q9BWW8 343 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 NFKBIZQ9BYH8 718 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 POLR3FQ9H1D9 316 aaPredicted RBP16.13■□□□□ 0.17
HMGCL-208ENST00000509389 SMOC2Q9H3U7 446 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 LIMD1Q9UGP4 676 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 USTQ9Y2C2 406 aa16.13■□□□□ 0.17
HMGCL-208ENST00000509389 PLXNA3P51805 1871 aa16.12■□□□□ 0.17
HMGCL-208ENST00000509389 CACNA1HO95180 2353 aa16.12■□□□□ 0.17
HMGCL-208ENST00000509389 SPDYE4A6NLX3 237 aa16.12■□□□□ 0.17
HMGCL-208ENST00000509389 USO1O60763 962 aaKnown RBP16.12■□□□□ 0.17
HMGCL-208ENST00000509389 URODP06132 367 aa16.12■□□□□ 0.17
HMGCL-208ENST00000509389 SPATA31C1P0DKV0 1188 aa16.12■□□□□ 0.17
HMGCL-208ENST00000509389 ATP2B1P20020 1258 aa16.12■□□□□ 0.17
HMGCL-208ENST00000509389 RESP18Q5W5W9 173 aa16.12■□□□□ 0.17
HMGCL-208ENST00000509389 SHC4Q6S5L8 630 aa16.12■□□□□ 0.17
HMGCL-208ENST00000509389 CDR2LQ86X02 465 aaPredicted RBP16.12■□□□□ 0.17
HMGCL-208ENST00000509389 RNF168Q8IYW5 571 aaPredicted RBP16.12■□□□□ 0.17
HMGCL-208ENST00000509389 PLCD3Q8N3E9 789 aa16.12■□□□□ 0.17
HMGCL-208ENST00000509389 RPS6KC1Q96S38 1066 aa16.12■□□□□ 0.17
HMGCL-208ENST00000509389 TRIM6Q9C030 488 aaPredicted RBP16.12■□□□□ 0.17
HMGCL-208ENST00000509389 GOLPH3LQ9H4A5 285 aa16.12■□□□□ 0.17
HMGCL-208ENST00000509389 NXF3Q9H4D5 531 aaKnown RBP16.12■□□□□ 0.17
HMGCL-208ENST00000509389 SSX2IPQ9Y2D8 614 aa16.12■□□□□ 0.17
HMGCL-208ENST00000509389 GIT1Q9Y2X7 761 aa16.12■□□□□ 0.17
HMGCL-208ENST00000509389 F8W810 466 aa16.11■□□□□ 0.17
HMGCL-208ENST00000509389 NPTXRO95502 500 aa16.11■□□□□ 0.17
HMGCL-208ENST00000509389 AKAP5P24588 427 aa16.11■□□□□ 0.17
HMGCL-208ENST00000509389 MCM7P33993 719 aa16.11■□□□□ 0.17
HMGCL-208ENST00000509389 FAM160A1Q05DH4 1040 aa16.11■□□□□ 0.17
HMGCL-208ENST00000509389 PTGDRQ13258 359 aa16.11■□□□□ 0.17
HMGCL-208ENST00000509389 SNW1Q13573 536 aaKnown RBP16.11■□□□□ 0.17
HMGCL-208ENST00000509389 KIAA0319Q5VV43 1072 aa16.11■□□□□ 0.17
HMGCL-208ENST00000509389 RBM43Q6ZSC3 357 aaKnown RBP16.11■□□□□ 0.17
HMGCL-208ENST00000509389 MAEAQ7L5Y9 396 aa16.11■□□□□ 0.17
HMGCL-208ENST00000509389 CATSPER3Q86XQ3 398 aa16.11■□□□□ 0.17
HMGCL-208ENST00000509389 HACE1Q8IYU2 909 aa16.11■□□□□ 0.17
HMGCL-208ENST00000509389 FMR1NBQ8N0W7 255 aaPredicted RBP16.11■□□□□ 0.17
HMGCL-208ENST00000509389 GSTCDQ8NEC7 633 aa16.11■□□□□ 0.17
HMGCL-208ENST00000509389 GPRC5CQ9NQ84 441 aa16.11■□□□□ 0.17
HMGCL-208ENST00000509389 DDX19AQ9NUU7 478 aaKnown RBP16.11■□□□□ 0.17
HMGCL-208ENST00000509389 A0A1B0GUA9 196 aa16.1■□□□□ 0.17
HMGCL-208ENST00000509389 TEX28O15482 410 aa16.1■□□□□ 0.17
HMGCL-208ENST00000509389 MED24O75448 989 aa16.1■□□□□ 0.17
HMGCL-208ENST00000509389 MARCKSP29966 332 aaPredicted RBP16.1■□□□□ 0.17
HMGCL-208ENST00000509389 GLUD2P49448 558 aa16.1■□□□□ 0.17
HMGCL-208ENST00000509389 GRIN1Q05586 938 aa16.1■□□□□ 0.17
HMGCL-208ENST00000509389 CAVIN1Q6NZI2 390 aaKnown RBP16.1■□□□□ 0.17
HMGCL-208ENST00000509389 SLC27A1Q6PCB7 646 aa16.1■□□□□ 0.17
HMGCL-208ENST00000509389 CCDC149Q6ZUS6 474 aa16.1■□□□□ 0.17
HMGCL-208ENST00000509389 COLEC11Q9BWP8 271 aa16.1■□□□□ 0.17
HMGCL-208ENST00000509389 RXFP1Q9HBX9 757 aa16.1■□□□□ 0.17
HMGCL-208ENST00000509389 TUFT1Q9NNX1 390 aa16.1■□□□□ 0.17
HMGCL-208ENST00000509389 MAN1C1Q9NR34 630 aa16.1■□□□□ 0.17
HMGCL-208ENST00000509389 MTCL1Q9Y4B5 1905 aaKnown RBP16.09■□□□□ 0.17
HMGCL-208ENST00000509389 GOLGA6L4A6NEF3 574 aa16.09■□□□□ 0.17
HMGCL-208ENST00000509389 LRRIQ4A6NIV6 560 aa16.09■□□□□ 0.17
HMGCL-208ENST00000509389 NR1I2O75469 434 aa16.09■□□□□ 0.17
HMGCL-208ENST00000509389 ADH1AP07327 375 aa16.09■□□□□ 0.17
HMGCL-208ENST00000509389 DSG1Q02413 1049 aa16.09■□□□□ 0.17
HMGCL-208ENST00000509389 ZNF174Q15697 407 aa16.09■□□□□ 0.17
HMGCL-208ENST00000509389 PPP4R3CPQ6ZMV5 832 aa16.09■□□□□ 0.17
HMGCL-208ENST00000509389 C15orf39Q6ZRI6 1047 aa16.09■□□□□ 0.17
HMGCL-208ENST00000509389 OTOP3Q7RTS5 596 aa16.09■□□□□ 0.17
HMGCL-208ENST00000509389 FSIP1Q8NA03 581 aa16.09■□□□□ 0.17
HMGCL-208ENST00000509389 MCPH1Q8NEM0 835 aa16.09■□□□□ 0.17
HMGCL-208ENST00000509389 CMASQ8NFW8 434 aaPredicted RBP16.09■□□□□ 0.17
HMGCL-208ENST00000509389 ACSF2Q96CM8 615 aaPredicted RBP16.09■□□□□ 0.17
HMGCL-208ENST00000509389 NACC1Q96RE7 527 aa16.09■□□□□ 0.17
HMGCL-208ENST00000509389 POLR3CQ9BUI4 534 aaPredicted RBP16.09■□□□□ 0.17
HMGCL-208ENST00000509389 CHST7Q9NS84 486 aa16.09■□□□□ 0.17
HMGCL-208ENST00000509389 KLK14Q9P0G3 267 aa16.09■□□□□ 0.17
HMGCL-208ENST00000509389 PARP2Q9UGN5 583 aa16.09■□□□□ 0.17
HMGCL-208ENST00000509389 GLUD1P00367 558 aa16.08■□□□□ 0.16
HMGCL-208ENST00000509389 ZNF445P59923 1031 aa16.08■□□□□ 0.16
HMGCL-208ENST00000509389 IL17AQ16552 155 aa16.08■□□□□ 0.16
HMGCL-208ENST00000509389 CCDC183Q5T5S1 534 aa16.08■□□□□ 0.16
HMGCL-208ENST00000509389 CDCA2Q69YH5 1023 aaPredicted RBP16.08■□□□□ 0.16
HMGCL-208ENST00000509389 SYAP1Q96A49 352 aaPredicted RBP16.08■□□□□ 0.16
HMGCL-208ENST00000509389 B3GALT6Q96L58 329 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms