RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 TRIM6Q9C030 488 aaPredicted RBP11.3□□□□□ -0.6
RFC1-211ENST00000509084 CDT1Q9H211 546 aa11.3□□□□□ -0.6
RFC1-211ENST00000509084 PIN4Q9Y237 131 aaKnown RBP11.3□□□□□ -0.6
RFC1-211ENST00000509084 NOC2LQ9Y3T9 749 aaKnown RBP11.3□□□□□ -0.6
RFC1-211ENST00000509084 TANC1Q9C0D5 1861 aa11.29□□□□□ -0.6
RFC1-211ENST00000509084 GOLGA6L6A8MZA4 724 aa11.29□□□□□ -0.6
RFC1-211ENST00000509084 PES1O00541 588 aaKnown RBP11.29□□□□□ -0.6
RFC1-211ENST00000509084 ADCY5O95622 1261 aa11.29□□□□□ -0.6
RFC1-211ENST00000509084 AFPP02771 609 aaKnown RBP11.29□□□□□ -0.6
RFC1-211ENST00000509084 CLTAP09496 248 aa11.29□□□□□ -0.6
RFC1-211ENST00000509084 HARSP12081 509 aaKnown RBP11.29□□□□□ -0.6
RFC1-211ENST00000509084 SKIP12755 728 aa11.29□□□□□ -0.6
RFC1-211ENST00000509084 ZSCAN20P17040 1043 aaPredicted RBP11.29□□□□□ -0.6
RFC1-211ENST00000509084 FGFR4P22455 802 aa11.29□□□□□ -0.6
RFC1-211ENST00000509084 GRM5P41594 1212 aa11.29□□□□□ -0.6
RFC1-211ENST00000509084 RAB27AP51159 221 aa11.29□□□□□ -0.6
RFC1-211ENST00000509084 VAMP7P51809 220 aa11.29□□□□□ -0.6
RFC1-211ENST00000509084 MCCD1P59942 119 aaPredicted RBP11.29□□□□□ -0.6
RFC1-211ENST00000509084 TLE2Q04725 743 aa11.29□□□□□ -0.6
RFC1-211ENST00000509084 CYP24A1Q07973 514 aa11.29□□□□□ -0.6
RFC1-211ENST00000509084 TRIM60Q495X7 471 aa11.29□□□□□ -0.6
RFC1-211ENST00000509084 DCAF17Q5H9S7 520 aaPredicted RBP11.29□□□□□ -0.6
RFC1-211ENST00000509084 TCERG1LQ5VWI1 586 aa11.29□□□□□ -0.6
RFC1-211ENST00000509084 EEF1DP3Q658K8 133 aa11.29□□□□□ -0.6
RFC1-211ENST00000509084 ZBTB33Q86T24 672 aa11.29□□□□□ -0.6
RFC1-211ENST00000509084 CBWD2Q8IUF1 395 aa11.29□□□□□ -0.6
RFC1-211ENST00000509084 BORCS6Q96GS4 357 aa11.29□□□□□ -0.6
RFC1-211ENST00000509084 CPB2Q96IY4 423 aa11.29□□□□□ -0.6
RFC1-211ENST00000509084 ZBTB45Q96K62 511 aaPredicted RBP11.29□□□□□ -0.6
RFC1-211ENST00000509084 FNBP1Q96RU3 617 aa11.29□□□□□ -0.6
RFC1-211ENST00000509084 CCDC94Q9BW85 323 aaPredicted RBP11.29□□□□□ -0.6
RFC1-211ENST00000509084 XPO4Q9C0E2 1151 aaKnown RBP11.29□□□□□ -0.6
RFC1-211ENST00000509084 VPS16Q9H269 839 aa11.29□□□□□ -0.6
RFC1-211ENST00000509084 NDST4Q9H3R1 872 aa11.29□□□□□ -0.6
RFC1-211ENST00000509084 ERVK-5Q9HDB9 667 aa11.29□□□□□ -0.6
RFC1-211ENST00000509084 RBAKQ9NYW8 714 aaPredicted RBP11.29□□□□□ -0.6
RFC1-211ENST00000509084 ST3GAL5Q9UNP4 418 aa11.29□□□□□ -0.6
RFC1-211ENST00000509084 GOLGA8IPA6NC78 632 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 GOLGA8JA6NMD2 632 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 FAM189A1O60320 539 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 IL18RAPO95256 599 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 ADRB2P07550 413 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 CLTBP09497 229 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 GHRP10912 638 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 HOXA11P31270 313 aaPredicted RBP11.28□□□□□ -0.6
RFC1-211ENST00000509084 GTF2H1P32780 548 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 AP3M2P53677 418 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 CCDC173Q0VFZ6 552 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 CETN1Q12798 172 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 NFX1Q12986 1120 aaKnown RBP11.28□□□□□ -0.6
RFC1-211ENST00000509084 LPIN1Q14693 890 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 NR1I3Q14994 352 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 PSMD6Q15008 389 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 TWF2Q6IBS0 349 aaKnown RBP11.28□□□□□ -0.6
RFC1-211ENST00000509084 TRAF7Q6Q0C0 670 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 CD302Q8IX05 232 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 THNSL1Q8IYQ7 743 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 RDH13Q8NBN7 331 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 APBB2Q92870 758 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 SLC35C1Q96A29 364 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 IQCDQ96DY2 449 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 MFSD14AQ96MC6 490 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 TRAIPQ9BWF2 469 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 FTHL17Q9BXU8 183 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 HAPLN2Q9GZV7 340 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 HIPK3Q9H422 1215 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 RPF1Q9H9Y2 349 aaKnown RBP11.28□□□□□ -0.6
RFC1-211ENST00000509084 TOPORSQ9NS56 1045 aaPredicted RBP11.28□□□□□ -0.6
RFC1-211ENST00000509084 CPSF3Q9UKF6 684 aaKnown RBP11.28□□□□□ -0.6
RFC1-211ENST00000509084 ATP11BQ9Y2G3 1177 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 USP20Q9Y2K6 914 aa11.28□□□□□ -0.6
RFC1-211ENST00000509084 A0A1W2PQC6 194 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 GTPBP10A4D1E9 387 aaKnown RBP11.27□□□□□ -0.61
RFC1-211ENST00000509084 PMM2O15305 246 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 P4HA2O15460 535 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 AP5Z1O43299 807 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 NPTXRO95502 500 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 CD52P31358 61 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 RFC2P35250 354 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 ACOT2P49753 483 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 YARSP54577 528 aaKnown RBP11.27□□□□□ -0.61
RFC1-211ENST00000509084 UBXN1Q04323 297 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 FAAP100Q0VG06 881 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 KCNH2Q12809 1159 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 TRIM14Q14142 442 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 MIIPQ5JXC2 388 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 CRELD2Q6UXH1 353 aaPredicted RBP11.27□□□□□ -0.61
RFC1-211ENST00000509084 NT5DC4Q86YG4 428 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 WDR49Q8IV35 697 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 PDCD7Q8N8D1 485 aaKnown RBP11.27□□□□□ -0.61
RFC1-211ENST00000509084 PARD3BQ8TEW8 1205 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 NAP1L5Q96NT1 182 aaPredicted RBP11.27□□□□□ -0.61
RFC1-211ENST00000509084 ERGIC2Q96RQ1 377 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 TSPAN18Q96SJ8 248 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 CGRRF1Q99675 332 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 IFIH1Q9BYX4 1025 aaKnown RBP11.27□□□□□ -0.61
RFC1-211ENST00000509084 ASB7Q9H672 318 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 TMEM39AQ9NV64 488 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 TBX21Q9UL17 535 aa11.27□□□□□ -0.61
RFC1-211ENST00000509084 PADI3Q9ULW8 664 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms