RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 ABCG1P45844 678 aa3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 GUCY1B3Q02153 619 aa3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 APBA1Q02410 837 aa3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 TRIM25Q14258 630 aaKnown RBP3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 PCBP1Q15365 356 aaKnown RBP eCLIP3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 TERF2Q15554 542 aa3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 SEPT7Q16181 437 aaKnown RBP3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 PDCD4Q53EL6 469 aaKnown RBP3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 C19orf54Q5BKX5 351 aa3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 ANKS6Q68DC2 871 aa3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 PASD1Q8IV76 773 aa3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 GLB1L2Q8IW92 636 aa3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 SLC44A3Q8N4M1 653 aa3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 ZNF366Q8N895 744 aa3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 OR10H5Q8NGA6 315 aa3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 RSAD2Q8WXG1 361 aa3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 NEU1Q99519 415 aa3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 KRTAP1-5Q9BYS1 174 aa3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 SLC29A3Q9BZD2 475 aa3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 SPTLC3Q9NUV7 552 aa3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 HDAC5Q9UQL6 1122 aa3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 CD2APQ9Y5K6 639 aa3.3□□□□□ -1.88
DEPDC1B-204ENST00000509006 SALL3Q9BXA9 1300 aa3.29□□□□□ -1.88
DEPDC1B-204ENST00000509006 TBKBP1A7MCY6 615 aa3.29□□□□□ -1.88
DEPDC1B-204ENST00000509006 B5MCH6 92 aa3.29□□□□□ -1.88
DEPDC1B-204ENST00000509006 ONECUT2O95948 504 aa3.29□□□□□ -1.88
DEPDC1B-204ENST00000509006 EGR2P11161 476 aaPredicted RBP3.29□□□□□ -1.88
DEPDC1B-204ENST00000509006 IBSPP21815 317 aaPredicted RBP3.29□□□□□ -1.88
DEPDC1B-204ENST00000509006 XPAP23025 273 aaPredicted RBP3.29□□□□□ -1.88
DEPDC1B-204ENST00000509006 KPNA1P52294 538 aaPredicted RBP3.29□□□□□ -1.88
DEPDC1B-204ENST00000509006 NRG3P56975 720 aa3.29□□□□□ -1.88
DEPDC1B-204ENST00000509006 MEF2AQ02078 507 aaPredicted RBP3.29□□□□□ -1.88
DEPDC1B-204ENST00000509006 PPARAQ07869 468 aa3.29□□□□□ -1.88
DEPDC1B-204ENST00000509006 SCAPQ12770 1279 aa3.29□□□□□ -1.88
DEPDC1B-204ENST00000509006 BMT2Q1RMZ1 405 aa3.29□□□□□ -1.88
DEPDC1B-204ENST00000509006 TKFCQ3LXA3 575 aa3.29□□□□□ -1.88
DEPDC1B-204ENST00000509006 LMBR1LQ6UX01 489 aa3.29□□□□□ -1.88
DEPDC1B-204ENST00000509006 ABHD15Q6UXT9 468 aa3.29□□□□□ -1.88
DEPDC1B-204ENST00000509006 ZNF384Q8TF68 577 aa3.29□□□□□ -1.88
DEPDC1B-204ENST00000509006 SNX33Q8WV41 574 aa3.29□□□□□ -1.88
DEPDC1B-204ENST00000509006 ANKS1AQ92625 1134 aa3.29□□□□□ -1.88
DEPDC1B-204ENST00000509006 MRFAP1L1Q96HT8 127 aa3.29□□□□□ -1.88
DEPDC1B-204ENST00000509006 PCGF6Q9BYE7 350 aa3.29□□□□□ -1.88
DEPDC1B-204ENST00000509006 WNT8AQ9H1J5 351 aa3.29□□□□□ -1.88
DEPDC1B-204ENST00000509006 MGST3O14880 152 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 ITGA10O75578 1167 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 SPDEFO95238 335 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 ESRRBO95718 433 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 CLEC2LP0C7M8 214 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 DDX6P26196 483 aaKnown RBP eCLIP3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 LSP1P33241 339 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 MPLP40238 635 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 ADCYAP1R1P41586 468 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 LSSP48449 732 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 NEK4P51957 841 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 MAPK7Q13164 816 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 MPP3Q13368 585 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 TCEA2Q15560 299 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 MFSD14BQ5SR56 506 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 ABHD17BQ5VST6 288 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 C1QL2Q7Z5L3 287 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 ARHGEF25Q86VW2 580 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 OR14C36Q8NHC7 312 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 CAGE1Q8TC20 777 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 NINJ1Q92982 152 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 CEP95Q96GE4 821 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 RNPC3Q96LT9 517 aaKnown RBP3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 ZNF778Q96MU6 729 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 GPR101Q96P66 508 aaPredicted RBP3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 CDC5LQ99459 802 aaKnown RBP3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 SPON1Q9HCB6 807 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 KIAA1586Q9HCI6 787 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 GPRC5DQ9NZD1 345 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 MAP3K2Q9Y2U5 619 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 CDY2AQ9Y6F7 541 aa3.28□□□□□ -1.88
DEPDC1B-204ENST00000509006 LRRC3CA6NJW4 275 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 WNT10BO00744 389 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 IKBKBO14920 756 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 PRAMEF4O60810 478 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 C1QL1O75973 258 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 GASTP01350 101 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 CFIP05156 583 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 RBP3P10745 1247 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 ITGAMP11215 1152 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 CTSSP25774 331 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 MGAT1P26572 445 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 ZNF81P51508 661 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 BLOC1S1P78537 153 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 NHLH1Q02575 133 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 C21orf62-AS1Q17RA5 79 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 PITRM1Q5JRX3 1037 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 AGAP9Q5VTM2 703 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 EFCAB12Q6NXP0 572 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 FRMD7Q6ZUT3 714 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 NOL8Q76FK4 1167 aaKnown RBP3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 Q8N9P0 234 aaPredicted RBP3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 RNF169Q8NCN4 708 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 ZCRB1Q8TBF4 217 aaKnown RBP3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 MDM1Q8TC05 714 aa3.27□□□□□ -1.89
DEPDC1B-204ENST00000509006 FUBP1Q96AE4 644 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms