RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 ASIC4Q96FT7 647 aa15□□□□□ -0.01
CCHCR1-227ENST00000508852 GPRC5CQ9NQ84 441 aa15□□□□□ -0.01
CCHCR1-227ENST00000508852 MAN1C1Q9NR34 630 aa15□□□□□ -0.01
CCHCR1-227ENST00000508852 MIOSQ9NXC5 875 aa15□□□□□ -0.01
CCHCR1-227ENST00000508852 K7ERI5 159 aa14.99□□□□□ -0.01
CCHCR1-227ENST00000508852 C2CD2LO14523 706 aa14.99□□□□□ -0.01
CCHCR1-227ENST00000508852 TEX28O15482 410 aa14.99□□□□□ -0.01
CCHCR1-227ENST00000508852 PAPLNO95428 1278 aa14.99□□□□□ -0.01
CCHCR1-227ENST00000508852 PTGDRQ13258 359 aa14.99□□□□□ -0.01
CCHCR1-227ENST00000508852 C4orf32Q8N8J7 132 aa14.99□□□□□ -0.01
CCHCR1-227ENST00000508852 GSTCDQ8NEC7 633 aa14.99□□□□□ -0.01
CCHCR1-227ENST00000508852 SNX29Q8TEQ0 813 aa14.99□□□□□ -0.01
CCHCR1-227ENST00000508852 DRC1Q96MC2 740 aa14.99□□□□□ -0.01
CCHCR1-227ENST00000508852 BHMT2Q9H2M3 363 aa14.99□□□□□ -0.01
CCHCR1-227ENST00000508852 PDZD7Q9H5P4 517 aa14.99□□□□□ -0.01
CCHCR1-227ENST00000508852 ZDHHC7Q9NXF8 308 aa14.99□□□□□ -0.01
CCHCR1-227ENST00000508852 IGSF9Q9P2J2 1179 aa14.99□□□□□ -0.01
CCHCR1-227ENST00000508852 KIAA1024Q9UPX6 916 aa14.99□□□□□ -0.01
CCHCR1-227ENST00000508852 RBM19Q9Y4C8 960 aaKnown RBP14.99□□□□□ -0.01
CCHCR1-227ENST00000508852 CCDC195A0A1B0GUA6 201 aa14.98□□□□□ -0.01
CCHCR1-227ENST00000508852 SP100P23497 879 aaPredicted RBP14.98□□□□□ -0.01
CCHCR1-227ENST00000508852 RTL10Q7L3V2 364 aa14.98□□□□□ -0.01
CCHCR1-227ENST00000508852 UROC1Q96N76 676 aa14.98□□□□□ -0.01
CCHCR1-227ENST00000508852 CCDC113Q9H0I3 377 aa14.98□□□□□ -0.01
CCHCR1-227ENST00000508852 NT5C3AQ9H0P0 336 aa14.98□□□□□ -0.01
CCHCR1-227ENST00000508852 TMEM134Q9H6X4 195 aa14.98□□□□□ -0.01
CCHCR1-227ENST00000508852 TOPORSQ9NS56 1045 aaPredicted RBP14.98□□□□□ -0.01
CCHCR1-227ENST00000508852 KMT2EQ8IZD2 1858 aa14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 C2orf16Q68DN1 1984 aa14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 A0A087WWV3 80 aa14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 SLC26A4O43511 780 aa14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 TRAPPC3O43617 180 aa14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 AVPR2P30518 371 aa14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 YARSP54577 528 aaKnown RBP14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 DMP1Q13316 513 aaPredicted RBP14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 TDGQ13569 410 aa14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 C8orf34Q49A92 452 aa14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 ATF7IP2Q5U623 682 aa14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 TAS1R1Q7RTX1 841 aa14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 RIN2Q8WYP3 895 aaPredicted RBP14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 KIF2CQ99661 725 aa14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 TTPALQ9BTX7 342 aa14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 PIDD1Q9HB75 910 aa14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 WDR6Q9NNW5 1121 aaKnown RBP14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 DDX19AQ9NUU7 478 aaKnown RBP14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 SNTG2Q9NY99 539 aa14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.97□□□□□ -0.015e-30■■■■■ 28.6
CCHCR1-227ENST00000508852 KCND2Q9NZV8 630 aa14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 KLK14Q9P0G3 267 aa14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 LIMD1Q9UGP4 676 aa14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 ZFP37Q9Y6Q3 630 aaPredicted RBP14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 PLXNA3P51805 1871 aa14.97□□□□□ -0.01
CCHCR1-227ENST00000508852 ZDBF2Q9HCK1 2354 aa14.96□□□□□ -0.01
CCHCR1-227ENST00000508852 H3BQV1 296 aa14.96□□□□□ -0.01
CCHCR1-227ENST00000508852 TMEM189-UBE2V1I3L0A0 370 aa14.96□□□□□ -0.01
CCHCR1-227ENST00000508852 RECQL4O94761 1208 aa14.96□□□□□ -0.01
CCHCR1-227ENST00000508852 WEE2P0C1S8 567 aa14.96□□□□□ -0.01
CCHCR1-227ENST00000508852 SCP2P22307 547 aa14.96□□□□□ -0.01
CCHCR1-227ENST00000508852 CDR2LQ86X02 465 aaPredicted RBP14.96□□□□□ -0.01
CCHCR1-227ENST00000508852 PIK3R5Q8WYR1 880 aa14.96□□□□□ -0.01
CCHCR1-227ENST00000508852 BSNDQ8WZ55 320 aa14.96□□□□□ -0.01
CCHCR1-227ENST00000508852 CCDC94Q9BW85 323 aaPredicted RBP14.96□□□□□ -0.01
CCHCR1-227ENST00000508852 MRPL4Q9BYD3 311 aaKnown RBP14.96□□□□□ -0.01
CCHCR1-227ENST00000508852 GPR62Q9BZJ7 368 aa14.96□□□□□ -0.01
CCHCR1-227ENST00000508852 SLC38A7Q9NVC3 462 aa14.96□□□□□ -0.01
CCHCR1-227ENST00000508852 TNFSF13BQ9Y275 285 aa14.96□□□□□ -0.01
CCHCR1-227ENST00000508852 CLUHO75153 1309 aa14.95□□□□□ -0.02
CCHCR1-227ENST00000508852 CCDC169A6NNP5 214 aa14.95□□□□□ -0.02
CCHCR1-227ENST00000508852 H0YCG3 227 aa14.95□□□□□ -0.02
CCHCR1-227ENST00000508852 BRD1O95696 1058 aa14.95□□□□□ -0.02
CCHCR1-227ENST00000508852 HNRNPA1P09651 372 aaKnown RBP eCLIP14.95□□□□□ -0.02
CCHCR1-227ENST00000508852 LIG1P18858 919 aa14.95□□□□□ -0.02
CCHCR1-227ENST00000508852 CLCN5P51795 746 aa14.95□□□□□ -0.02
CCHCR1-227ENST00000508852 SMTNP53814 917 aa14.95□□□□□ -0.02
CCHCR1-227ENST00000508852 ARL6IP4Q66PJ3 421 aaKnown RBP14.95□□□□□ -0.02
CCHCR1-227ENST00000508852 MCTP1Q6DN14 999 aa14.95□□□□□ -0.02
CCHCR1-227ENST00000508852 DCLRE1AQ6PJP8 1040 aa14.95□□□□□ -0.02
CCHCR1-227ENST00000508852 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.95□□□□□ -0.02
CCHCR1-227ENST00000508852 ALYREFQ86V81 257 aaKnown RBP14.95□□□□□ -0.02
CCHCR1-227ENST00000508852 SMG7Q92540 1137 aaKnown RBP14.95□□□□□ -0.02
CCHCR1-227ENST00000508852 DDX27Q96GQ7 796 aaKnown RBP14.95□□□□□ -0.02
CCHCR1-227ENST00000508852 PRKD2Q9BZL6 878 aa14.95□□□□□ -0.02
CCHCR1-227ENST00000508852 MFSD1Q9H3U5 465 aa14.95□□□□□ -0.02
CCHCR1-227ENST00000508852 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.95□□□□□ -0.02
CCHCR1-227ENST00000508852 CDH22Q9UJ99 828 aa14.95□□□□□ -0.02
CCHCR1-227ENST00000508852 PCDHB6Q9Y5E3 794 aa14.95□□□□□ -0.02
CCHCR1-227ENST00000508852 TGM5O43548 720 aa14.94□□□□□ -0.02
CCHCR1-227ENST00000508852 BMP15O95972 392 aa14.94□□□□□ -0.02
CCHCR1-227ENST00000508852 GUCY2CP25092 1073 aa14.94□□□□□ -0.02
CCHCR1-227ENST00000508852 HOXA9P31269 272 aa14.94□□□□□ -0.02
CCHCR1-227ENST00000508852 MRE11P49959 708 aa14.94□□□□□ -0.02
CCHCR1-227ENST00000508852 TOB1P50616 345 aaPredicted RBP14.94□□□□□ -0.02
CCHCR1-227ENST00000508852 PEX3P56589 373 aa14.94□□□□□ -0.02
CCHCR1-227ENST00000508852 ECM1Q16610 540 aa14.94□□□□□ -0.02
CCHCR1-227ENST00000508852 UVSSAQ2YD98 709 aa14.94□□□□□ -0.02
CCHCR1-227ENST00000508852 LIN9Q5TKA1 542 aa14.94□□□□□ -0.02
CCHCR1-227ENST00000508852 FAM171A1Q5VUB5 890 aa14.94□□□□□ -0.02
CCHCR1-227ENST00000508852 LILRA6Q6PI73 481 aa14.94□□□□□ -0.02
CCHCR1-227ENST00000508852 PALB2Q86YC2 1186 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms