RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 PAX3P23760 479 aa11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 SYKP43405 635 aa11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 RNASELQ05823 741 aaKnown RBP11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 CAMK1Q14012 370 aa11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 HSP90AA2PQ14568 343 aaPredicted RBP11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 FOXD4L6Q3SYB3 417 aaPredicted RBP11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 PAN2Q504Q3 1202 aaKnown RBP11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 FOXD4L3Q6VB84 417 aaPredicted RBP11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 CLEC17AQ6ZS10 378 aa11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 DYMQ7RTS9 669 aa11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 SPRED2Q7Z698 418 aa11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 CD302Q8IX05 232 aa11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 COLGALT2Q8IYK4 626 aa11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 LPPQ93052 612 aa11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 PPP2R3CQ969Q6 453 aa11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 ACAP3Q96P50 834 aa11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 GAD1Q99259 594 aa11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 TCHPQ9BT92 498 aa11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 TMEM206Q9H813 350 aa11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 MRPL44Q9H9J2 332 aaKnown RBP11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 CERS4Q9HA82 394 aa11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 CGNQ9P2M7 1197 aaKnown RBP11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 ATG2AQ2TAZ0 1938 aa11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 RFXAPO00287 272 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 OGTO15294 1046 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 GRM6O15303 877 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 RECQL4O94761 1208 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 DDHD2O94830 711 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 LDHAP00338 332 aaKnown RBP11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 PFKFB1P16118 471 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 IGFBP4P22692 258 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 YARSP54577 528 aaKnown RBP11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 TUSC3Q13454 348 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 NOLC1Q14978 699 aaKnown RBP eCLIP11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 NAB2Q15742 525 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 TMEM132AQ24JP5 1023 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 CTC1Q2NKJ3 1217 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 ZNF568Q3ZCX4 644 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 LONRF3Q496Y0 759 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 SPOUT1Q5T280 376 aaKnown RBP11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 L1TD1Q5T7N2 865 aaKnown RBP11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 EPM2AIP1Q7L775 607 aaPredicted RBP11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 SFR1Q86XK3 245 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 RNF168Q8IYW5 571 aaPredicted RBP11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 ZNF507Q8TCN5 953 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 POF1BQ8WVV4 589 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 DDX27Q96GQ7 796 aaKnown RBP11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 IGSF21Q96ID5 467 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 TIGD1Q96MW7 591 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 UROC1Q96N76 676 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 FAM193BQ96PV7 902 aaPredicted RBP11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 ACCSQ96QU6 501 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 CDCA3Q99618 268 aaPredicted RBP11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 COLEC11Q9BWP8 271 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 GTPBP4Q9BZE4 634 aaKnown RBP11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 NSUN3Q9H649 340 aaKnown RBP11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 SLC38A7Q9NVC3 462 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 MIOSQ9NXC5 875 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 SSX2IPQ9Y2D8 614 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 FAN1Q9Y2M0 1017 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 HES2Q9Y543 173 aa11.59□□□□□ -0.55
POLR2J3-213ENST00000508848 A0A1B0GVL5 298 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 TTC26A0AVF1 554 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 TMEM189-UBE2V1I3L0A0 370 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 K7ENM7 598 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 PTGESO14684 152 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 FSCN2O14926 492 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 HNRNPDLO14979 420 aaKnown RBP11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 FAM189A1O60320 539 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 IDEP14735 1019 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 GARTP22102 1010 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 NMT1P30419 496 aaKnown RBP11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 RPL9P32969 192 aaKnown RBP11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 MLH1P40692 756 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 LIG4P49917 911 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 AFF1P51825 1210 aaKnown RBP11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 NDUFA8P51970 172 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 ZBTB6Q15916 424 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 TMEM184AQ6ZMB5 413 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 ZNF280BQ86YH2 543 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 THNSL1Q8IYQ7 743 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 MRPL43Q8N983 215 aaKnown RBP11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 TMEM87AQ8NBN3 555 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 ENGASEQ8NFI3 743 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 GDPD5Q8WTR4 605 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 ATXN2LQ8WWM7 1075 aaKnown RBP11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 PAGE5Q96GU1 130 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 TMEM169Q96HH4 297 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 PPP1R10Q96QC0 940 aaKnown RBP11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 RPS6KC1Q96S38 1066 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 ASB7Q9H672 318 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 ALG13Q9NP73 1137 aaKnown RBP11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 TLR9Q9NR96 1032 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 SNTG2Q9NY99 539 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 CNTN3Q9P232 1028 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 PARP2Q9UGN5 583 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 MTUS1Q9ULD2 1270 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 DERAQ9Y315 318 aa11.58□□□□□ -0.56
POLR2J3-213ENST00000508848 MTCL1Q9Y4B5 1905 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms