RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 WASP42768 502 aa9.37□□□□□ -0.91
CHD1-205ENST00000508756 RECQLP46063 649 aaPredicted RBP9.37□□□□□ -0.91
CHD1-205ENST00000508756 FLT3LGP49771 235 aa9.37□□□□□ -0.91
CHD1-205ENST00000508756 CSRP2Q16527 193 aa9.37□□□□□ -0.91
CHD1-205ENST00000508756 NRN1LQ496H8 165 aa9.37□□□□□ -0.91
CHD1-205ENST00000508756 OR52N2Q8NGI0 321 aa9.37□□□□□ -0.91
CHD1-205ENST00000508756 IL17DQ8TAD2 202 aa9.37□□□□□ -0.91
CHD1-205ENST00000508756 SLC35B2Q8TB61 432 aa9.37□□□□□ -0.91
CHD1-205ENST00000508756 CCHCR1Q8TD31 782 aa9.37□□□□□ -0.91
CHD1-205ENST00000508756 RAB24Q969Q5 203 aa9.37□□□□□ -0.91
CHD1-205ENST00000508756 MNTQ99583 582 aa9.37□□□□□ -0.91
CHD1-205ENST00000508756 C7orf25Q9BPX7 421 aa9.37□□□□□ -0.91
CHD1-205ENST00000508756 LIMCH1Q9UPQ0 1083 aa9.37□□□□□ -0.91
CHD1-205ENST00000508756 LUC7L2Q9Y383 392 aaKnown RBP9.37□□□□□ -0.91
CHD1-205ENST00000508756 B5MCH6 92 aa9.36□□□□□ -0.91
CHD1-205ENST00000508756 HSP90B1P14625 803 aaKnown RBP9.36□□□□□ -0.91
CHD1-205ENST00000508756 FPR1P21462 350 aa9.36□□□□□ -0.91
CHD1-205ENST00000508756 EDNRBP24530 442 aa9.36□□□□□ -0.91
CHD1-205ENST00000508756 CNGB1Q14028 1251 aaPredicted RBP9.36□□□□□ -0.91
CHD1-205ENST00000508756 TTF1Q15361 905 aaPredicted RBP9.36□□□□□ -0.91
CHD1-205ENST00000508756 C3orf36Q3SXR2 165 aa9.36□□□□□ -0.91
CHD1-205ENST00000508756 FAM47AQ5JRC9 791 aa9.36□□□□□ -0.91
CHD1-205ENST00000508756 RNF207Q6ZRF8 634 aa9.36□□□□□ -0.91
CHD1-205ENST00000508756 GPRIN1Q7Z2K8 1008 aa9.36□□□□□ -0.91
CHD1-205ENST00000508756 C1orf210Q8IVY1 113 aa9.36□□□□□ -0.91
CHD1-205ENST00000508756 RHOT1Q8IXI2 618 aa9.36□□□□□ -0.91
CHD1-205ENST00000508756 COA7Q96BR5 231 aa9.36□□□□□ -0.91
CHD1-205ENST00000508756 HOOK2Q96ED9 719 aa9.36□□□□□ -0.91
CHD1-205ENST00000508756 AASDHPPTQ9NRN7 309 aa9.36□□□□□ -0.91
CHD1-205ENST00000508756 IPPQ9Y573 584 aa9.36□□□□□ -0.91
CHD1-205ENST00000508756 CCDC154A6NI56 674 aa9.35□□□□□ -0.91
CHD1-205ENST00000508756 PRR5-ARHGAP8B1AHC4 643 aa9.35□□□□□ -0.91
CHD1-205ENST00000508756 HTRA2O43464 458 aaPredicted RBP9.35□□□□□ -0.91
CHD1-205ENST00000508756 UAP1L1Q3KQV9 507 aa9.35□□□□□ -0.91
CHD1-205ENST00000508756 DCAF17Q5H9S7 520 aaPredicted RBP9.35□□□□□ -0.91
CHD1-205ENST00000508756 AFMIDQ63HM1 303 aa9.35□□□□□ -0.91
CHD1-205ENST00000508756 HTR3DQ70Z44 454 aa9.35□□□□□ -0.91
CHD1-205ENST00000508756 CMTR2Q8IYT2 770 aaKnown RBP9.35□□□□□ -0.91
CHD1-205ENST00000508756 ZGPATQ8N5A5 531 aaKnown RBP9.35□□□□□ -0.91
CHD1-205ENST00000508756 RNF169Q8NCN4 708 aa9.35□□□□□ -0.91
CHD1-205ENST00000508756 SPON1Q9HCB6 807 aa9.35□□□□□ -0.91
CHD1-205ENST00000508756 PCDHA13Q9Y5I0 950 aa9.35□□□□□ -0.91
CHD1-205ENST00000508756 CXorf49A8MYA2 514 aaPredicted RBP9.34□□□□□ -0.91
CHD1-205ENST00000508756 AMY1AP04745 511 aa9.34□□□□□ -0.91
CHD1-205ENST00000508756 PCSK1P29120 753 aa9.34□□□□□ -0.91
CHD1-205ENST00000508756 ALDH1A3P47895 512 aa9.34□□□□□ -0.91
CHD1-205ENST00000508756 ADKP55263 362 aaKnown RBP9.34□□□□□ -0.91
CHD1-205ENST00000508756 SP140Q13342 867 aa9.34□□□□□ -0.91
CHD1-205ENST00000508756 IL10RAQ13651 578 aa9.34□□□□□ -0.91
CHD1-205ENST00000508756 MIGA2Q7L4E1 593 aa9.34□□□□□ -0.91
CHD1-205ENST00000508756 ACTL7AQ9Y615 435 aa9.34□□□□□ -0.91
CHD1-205ENST00000508756 XDHP47989 1333 aa9.33□□□□□ -0.92
CHD1-205ENST00000508756 TBKBP1A7MCY6 615 aa9.33□□□□□ -0.92
CHD1-205ENST00000508756 GOLGA6L6A8MZA4 724 aa9.33□□□□□ -0.92
CHD1-205ENST00000508756 GPR32O75388 356 aa9.33□□□□□ -0.92
CHD1-205ENST00000508756 RAP2AP10114 183 aa9.33□□□□□ -0.92
CHD1-205ENST00000508756 MCL1Q07820 350 aa9.33□□□□□ -0.92
CHD1-205ENST00000508756 VPS72Q15906 364 aa9.33□□□□□ -0.92
CHD1-205ENST00000508756 PLEKHG6Q3KR16 790 aa9.33□□□□□ -0.92
CHD1-205ENST00000508756 TMEM240Q5SV17 173 aa9.33□□□□□ -0.92
CHD1-205ENST00000508756 TMPRSS6Q8IU80 811 aa9.33□□□□□ -0.92
CHD1-205ENST00000508756 CPA6Q8N4T0 437 aa9.33□□□□□ -0.92
CHD1-205ENST00000508756 TFAP2CQ92754 450 aa9.33□□□□□ -0.92
CHD1-205ENST00000508756 HDAC10Q969S8 669 aa9.33□□□□□ -0.92
CHD1-205ENST00000508756 MANSC1Q9H8J5 431 aa9.33□□□□□ -0.92
CHD1-205ENST00000508756 TMEM140Q9NV12 185 aa9.33□□□□□ -0.92
CHD1-205ENST00000508756 IL2RBP14784 551 aa9.32□□□□□ -0.92
CHD1-205ENST00000508756 PTTG1IPP53801 180 aa9.32□□□□□ -0.92
CHD1-205ENST00000508756 MTM1Q13496 603 aa9.32□□□□□ -0.92
CHD1-205ENST00000508756 PUM1Q14671 1186 aaKnown RBP eCLIP9.32□□□□□ -0.929e-8■■□□□ 13
CHD1-205ENST00000508756 BMT2Q1RMZ1 405 aa9.32□□□□□ -0.92
CHD1-205ENST00000508756 METTL24Q5JXM2 366 aa9.32□□□□□ -0.92
CHD1-205ENST00000508756 NAIF1Q69YI7 327 aaPredicted RBP9.32□□□□□ -0.92
CHD1-205ENST00000508756 GGNQ86UU5 652 aa9.32□□□□□ -0.92
CHD1-205ENST00000508756 KAT5Q92993 513 aa9.32□□□□□ -0.92
CHD1-205ENST00000508756 KRTAP9-3Q9BYQ3 159 aa9.32□□□□□ -0.92
CHD1-205ENST00000508756 AURKAIP1Q9NWT8 199 aaPredicted RBP9.32□□□□□ -0.92
CHD1-205ENST00000508756 MOCS1Q9NZB8 636 aa9.32□□□□□ -0.92
CHD1-205ENST00000508756 CEP72Q9P209 647 aa9.32□□□□□ -0.92
CHD1-205ENST00000508756 IP6K2Q9UHH9 426 aa9.32□□□□□ -0.92
CHD1-205ENST00000508756 RUVBL1Q9Y265 456 aaKnown RBP9.32□□□□□ -0.92
CHD1-205ENST00000508756 MYBBP1AQ9BQG0 1328 aaKnown RBP9.31□□□□□ -0.92
CHD1-205ENST00000508756 MATN3O15232 486 aa9.31□□□□□ -0.92
CHD1-205ENST00000508756 C1SP09871 688 aa9.31□□□□□ -0.92
CHD1-205ENST00000508756 RAP2BP61225 183 aa9.31□□□□□ -0.92
CHD1-205ENST00000508756 DGCR2P98153 550 aa9.31□□□□□ -0.92
CHD1-205ENST00000508756 PTH1RQ03431 593 aa9.31□□□□□ -0.92
CHD1-205ENST00000508756 TARDBPQ13148 414 aaKnown RBP eCLIP9.31□□□□□ -0.923e-8■■■■■ 28.2
CHD1-205ENST00000508756 ZXDCQ2QGD7 858 aaPredicted RBP9.31□□□□□ -0.92
CHD1-205ENST00000508756 ANKRD13AQ8IZ07 590 aa9.31□□□□□ -0.92
CHD1-205ENST00000508756 MIER2Q8N344 545 aa9.31□□□□□ -0.92
CHD1-205ENST00000508756 OR10H5Q8NGA6 315 aa9.31□□□□□ -0.92
CHD1-205ENST00000508756 CYFIP2Q96F07 1278 aa9.31□□□□□ -0.92
CHD1-205ENST00000508756 MRI1Q9BV20 369 aa9.31□□□□□ -0.92
CHD1-205ENST00000508756 MYRFQ9Y2G1 1151 aa9.31□□□□□ -0.92
CHD1-205ENST00000508756 PJA2O43164 708 aa9.3□□□□□ -0.92
CHD1-205ENST00000508756 IL33O95760 270 aa9.3□□□□□ -0.92
CHD1-205ENST00000508756 CLRN1P58418 232 aa9.3□□□□□ -0.92
CHD1-205ENST00000508756 ATP8B2P98198 1209 aa9.3□□□□□ -0.92
CHD1-205ENST00000508756 TOB2Q14106 344 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms