RNA–Protein interactions for RNA: ENST00000508197.1

CAST-221, Transcript of calpastatin, humanhuman

TSL 3

Gene CAST, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-221ENST00000508197 GCOM2Q9BZD3 368 aaPredicted RBP12.55□□□□□ -0.4
CAST-221ENST00000508197 LSG1Q9H089 658 aaKnown RBP12.55□□□□□ -0.4
CAST-221ENST00000508197 ARHGEF3Q9NR81 526 aa12.55□□□□□ -0.4
CAST-221ENST00000508197 DISC1Q9NRI5 854 aa12.55□□□□□ -0.4
CAST-221ENST00000508197 MRPL17Q9NRX2 175 aaKnown RBP12.55□□□□□ -0.4
CAST-221ENST00000508197 MARCH5Q9NX47 278 aa12.55□□□□□ -0.4
CAST-221ENST00000508197 MTF2Q9Y483 593 aaPredicted RBP12.55□□□□□ -0.4
CAST-221ENST00000508197 SAMM50Q9Y512 469 aa12.55□□□□□ -0.4
CAST-221ENST00000508197 CLUHO75153 1309 aa12.55□□□□□ -0.4
CAST-221ENST00000508197 F8W810 466 aa12.54□□□□□ -0.4
CAST-221ENST00000508197 SOD2P04179 222 aa12.54□□□□□ -0.4
CAST-221ENST00000508197 TGM1P22735 817 aa12.54□□□□□ -0.4
CAST-221ENST00000508197 CDC27P30260 824 aa12.54□□□□□ -0.4
CAST-221ENST00000508197 CIITAP33076 1130 aa12.54□□□□□ -0.4
CAST-221ENST00000508197 AK2P54819 239 aa12.54□□□□□ -0.4
CAST-221ENST00000508197 STARD6P59095 220 aa12.54□□□□□ -0.4
CAST-221ENST00000508197 GPC5P78333 572 aa12.54□□□□□ -0.4
CAST-221ENST00000508197 HTR4Q13639 388 aa12.54□□□□□ -0.4
CAST-221ENST00000508197 AAMPQ13685 434 aa12.54□□□□□ -0.4
CAST-221ENST00000508197 NECTIN1Q15223 517 aa12.54□□□□□ -0.4
CAST-221ENST00000508197 DCLRE1AQ6PJP8 1040 aa12.54□□□□□ -0.4
CAST-221ENST00000508197 ZC3H14Q6PJT7 736 aaKnown RBP12.54□□□□□ -0.4
CAST-221ENST00000508197 MRPL10Q7Z7H8 261 aaKnown RBP12.54□□□□□ -0.4
CAST-221ENST00000508197 PJA1Q8NG27 643 aa12.54□□□□□ -0.4
CAST-221ENST00000508197 EXOC6Q8TAG9 804 aa12.54□□□□□ -0.4
CAST-221ENST00000508197 SMG7Q92540 1137 aaKnown RBP12.54□□□□□ -0.4
CAST-221ENST00000508197 NXPE3Q969Y0 559 aa12.54□□□□□ -0.4
CAST-221ENST00000508197 NIFKQ9BYG3 293 aaKnown RBP12.54□□□□□ -0.4
CAST-221ENST00000508197 NT5C3AQ9H0P0 336 aa12.54□□□□□ -0.4
CAST-221ENST00000508197 RXFP1Q9HBX9 757 aa12.54□□□□□ -0.4
CAST-221ENST00000508197 SLC2A4RGQ9NR83 387 aa12.54□□□□□ -0.4
CAST-221ENST00000508197 PIN4Q9Y237 131 aaKnown RBP12.54□□□□□ -0.4
CAST-221ENST00000508197 FAN1Q9Y2M0 1017 aa12.54□□□□□ -0.4
CAST-221ENST00000508197 PCDHB2Q9Y5E7 798 aa12.54□□□□□ -0.4
CAST-221ENST00000508197 ZFHX4Q86UP3 3567 aa12.54□□□□□ -0.4
CAST-221ENST00000508197 DOCK8Q8NF50 2099 aa12.53□□□□□ -0.4
CAST-221ENST00000508197 WDR64B1ANS9 1081 aa12.53□□□□□ -0.4
CAST-221ENST00000508197 MSH4O15457 936 aa12.53□□□□□ -0.4
CAST-221ENST00000508197 POMCP01189 267 aa12.53□□□□□ -0.4
CAST-221ENST00000508197 HOXA11P31270 313 aaPredicted RBP12.53□□□□□ -0.4
CAST-221ENST00000508197 RAB15P59190 212 aa12.53□□□□□ -0.4
CAST-221ENST00000508197 NONOQ15233 471 aaKnown RBP eCLIP12.53□□□□□ -0.4
CAST-221ENST00000508197 UBXN11Q5T124 520 aa12.53□□□□□ -0.4
CAST-221ENST00000508197 C6orf118Q5T5N4 469 aa12.53□□□□□ -0.4
CAST-221ENST00000508197 CYP26C1Q6V0L0 522 aa12.53□□□□□ -0.4
CAST-221ENST00000508197 LINC00528Q8N1L1 170 aa12.53□□□□□ -0.4
CAST-221ENST00000508197 RSPH1Q8WYR4 309 aa12.53□□□□□ -0.4
CAST-221ENST00000508197 TCEANC2Q96MN5 208 aa12.53□□□□□ -0.4
CAST-221ENST00000508197 IFT122Q9HBG6 1241 aa12.53□□□□□ -0.4
CAST-221ENST00000508197 MIOSQ9NXC5 875 aa12.53□□□□□ -0.4
CAST-221ENST00000508197 PCDHB9Q9Y5E1 797 aa12.53□□□□□ -0.4
CAST-221ENST00000508197 NUMBLQ9Y6R0 609 aa12.53□□□□□ -0.4
CAST-221ENST00000508197 CACNA1GO43497 2377 aa12.53□□□□□ -0.4
CAST-221ENST00000508197 FANCMQ8IYD8 2048 aa12.53□□□□□ -0.4
CAST-221ENST00000508197 COL4A3Q01955 1670 aa12.53□□□□□ -0.4
CAST-221ENST00000508197 DCDC2BA2VCK2 349 aa12.52□□□□□ -0.41
CAST-221ENST00000508197 CARNS1A5YM72 827 aa12.52□□□□□ -0.41
CAST-221ENST00000508197 hCG_1984214I3L0E3 225 aa12.52□□□□□ -0.41
CAST-221ENST00000508197 BMP2P12643 396 aa12.52□□□□□ -0.41
CAST-221ENST00000508197 SKIP12755 728 aa12.52□□□□□ -0.41
CAST-221ENST00000508197 RFX1P22670 979 aa12.52□□□□□ -0.41
CAST-221ENST00000508197 SETQ01105 290 aaPredicted RBP12.52□□□□□ -0.41
CAST-221ENST00000508197 EXOSC10Q01780 885 aaKnown RBP12.52□□□□□ -0.41
CAST-221ENST00000508197 SNW1Q13573 536 aaKnown RBP12.52□□□□□ -0.41
CAST-221ENST00000508197 RTN1Q16799 776 aa12.52□□□□□ -0.41
CAST-221ENST00000508197 MTERF2Q49AM1 385 aa12.52□□□□□ -0.41
CAST-221ENST00000508197 CREB3L3Q68CJ9 461 aa12.52□□□□□ -0.41
CAST-221ENST00000508197 LILRA6Q6PI73 481 aa12.52□□□□□ -0.41
CAST-221ENST00000508197 PARM1Q6UWI2 310 aa12.52□□□□□ -0.41
CAST-221ENST00000508197 PALB2Q86YC2 1186 aa12.52□□□□□ -0.41
CAST-221ENST00000508197 RHPN2Q8IUC4 686 aa12.52□□□□□ -0.41
CAST-221ENST00000508197 COLGALT2Q8IYK4 626 aa12.52□□□□□ -0.41
CAST-221ENST00000508197 ZNF713Q8N859 430 aaPredicted RBP12.52□□□□□ -0.41
CAST-221ENST00000508197 STAMQ92783 540 aa12.52□□□□□ -0.41
CAST-221ENST00000508197 FGF14Q92915 247 aa12.52□□□□□ -0.41
CAST-221ENST00000508197 B3GALT6Q96L58 329 aa12.52□□□□□ -0.41
CAST-221ENST00000508197 TMEM175Q9BSA9 504 aa12.52□□□□□ -0.41
CAST-221ENST00000508197 DDX23Q9BUQ8 820 aaKnown RBP12.52□□□□□ -0.41
CAST-221ENST00000508197 ZMYND12Q9H0C1 365 aa12.52□□□□□ -0.41
CAST-221ENST00000508197 UNC45AQ9H3U1 944 aa12.52□□□□□ -0.41
CAST-221ENST00000508197 PRM3Q9NNZ6 103 aa12.52□□□□□ -0.41
CAST-221ENST00000508197 RBM28Q9NW13 759 aaKnown RBP12.52□□□□□ -0.41
CAST-221ENST00000508197 SUCLA2Q9P2R7 463 aaPredicted RBP12.52□□□□□ -0.41
CAST-221ENST00000508197 PRG3Q9Y2Y8 225 aaPredicted RBP12.52□□□□□ -0.41
CAST-221ENST00000508197 FRYLO94915 3013 aa12.52□□□□□ -0.41
CAST-221ENST00000508197 MYH9P35579 1960 aaKnown RBP12.52□□□□□ -0.41
CAST-221ENST00000508197 TGM5O43548 720 aa12.51□□□□□ -0.41
CAST-221ENST00000508197 CHMP2AO43633 222 aa12.51□□□□□ -0.41
CAST-221ENST00000508197 GAS2O43903 313 aaKnown RBP12.51□□□□□ -0.41
CAST-221ENST00000508197 KINO60870 393 aaKnown RBP12.51□□□□□ -0.41
CAST-221ENST00000508197 GLUD1P00367 558 aa12.51□□□□□ -0.41
CAST-221ENST00000508197 ADH1AP07327 375 aa12.51□□□□□ -0.41
CAST-221ENST00000508197 SFPQP23246 707 aaKnown RBP eCLIP12.51□□□□□ -0.41
CAST-221ENST00000508197 ADD1P35611 737 aaKnown RBP12.51□□□□□ -0.41
CAST-221ENST00000508197 CDC42EP1Q00587 391 aa12.51□□□□□ -0.41
CAST-221ENST00000508197 NR1H3Q13133 447 aa12.51□□□□□ -0.41
CAST-221ENST00000508197 PFKFB3Q16875 520 aaPredicted RBP12.51□□□□□ -0.41
CAST-221ENST00000508197 B3GNT9Q6UX72 402 aa12.51□□□□□ -0.41
CAST-221ENST00000508197 CATSPER4Q7RTX7 472 aa12.51□□□□□ -0.41
CAST-221ENST00000508197 ZNF410Q86VK4 478 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms