RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 B3GALT6Q96L58 329 aa22.96■■□□□ 1.27
CLDND1-216ENST00000507944 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.96■■□□□ 1.27
CLDND1-216ENST00000507944 LIMD1Q9UGP4 676 aa22.96■■□□□ 1.27
CLDND1-216ENST00000507944 DPP7Q9UHL4 492 aa22.96■■□□□ 1.27
CLDND1-216ENST00000507944 SORCS3Q9UPU3 1222 aa22.96■■□□□ 1.27
CLDND1-216ENST00000507944 PLXNA3P51805 1871 aa22.96■■□□□ 1.27
CLDND1-216ENST00000507944 MTCL1Q9Y4B5 1905 aaKnown RBP22.96■■□□□ 1.27
CLDND1-216ENST00000507944 E9PMD0 336 aa22.95■■□□□ 1.26
CLDND1-216ENST00000507944 RECQL4O94761 1208 aa22.95■■□□□ 1.26
CLDND1-216ENST00000507944 PRPHP41219 470 aa22.95■■□□□ 1.26
CLDND1-216ENST00000507944 MTMR3Q13615 1198 aa22.95■■□□□ 1.26
CLDND1-216ENST00000507944 HSP90AA2PQ14568 343 aaPredicted RBP22.95■■□□□ 1.26
CLDND1-216ENST00000507944 TRIP11Q15643 1979 aa22.95■■□□□ 1.26
CLDND1-216ENST00000507944 ELMSAN1Q6PJG2 1045 aa22.95■■□□□ 1.26
CLDND1-216ENST00000507944 DTHD1Q6ZMT9 781 aa22.95■■□□□ 1.26
CLDND1-216ENST00000507944 C15orf39Q6ZRI6 1047 aa22.95■■□□□ 1.26
CLDND1-216ENST00000507944 GPR65Q8IYL9 337 aa22.95■■□□□ 1.26
CLDND1-216ENST00000507944 UBALD2Q8IYN6 164 aa22.95■■□□□ 1.26
CLDND1-216ENST00000507944 CMASQ8NFW8 434 aaPredicted RBP22.95■■□□□ 1.26
CLDND1-216ENST00000507944 TMX3Q96JJ7 454 aa22.95■■□□□ 1.26
CLDND1-216ENST00000507944 PAAF1Q9BRP4 392 aa22.95■■□□□ 1.26
CLDND1-216ENST00000507944 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.95■■□□□ 1.26
CLDND1-216ENST00000507944 CACNG4Q9UBN1 327 aa22.95■■□□□ 1.26
CLDND1-216ENST00000507944 PP2D1A8MPX8 630 aa22.94■■□□□ 1.26
CLDND1-216ENST00000507944 K7ERI5 159 aa22.94■■□□□ 1.26
CLDND1-216ENST00000507944 PTGESO14684 152 aa22.94■■□□□ 1.26
CLDND1-216ENST00000507944 THP07101 528 aa22.94■■□□□ 1.26
CLDND1-216ENST00000507944 ASGR2P07307 311 aa22.94■■□□□ 1.26
CLDND1-216ENST00000507944 CDC25AP30304 524 aa22.94■■□□□ 1.26
CLDND1-216ENST00000507944 NT5DC1Q5TFE4 455 aa22.94■■□□□ 1.26
CLDND1-216ENST00000507944 CCDC149Q6ZUS6 474 aa22.94■■□□□ 1.26
CLDND1-216ENST00000507944 RIN2Q8WYP3 895 aaPredicted RBP22.94■■□□□ 1.26
CLDND1-216ENST00000507944 ACSF2Q96CM8 615 aaPredicted RBP22.94■■□□□ 1.26
CLDND1-216ENST00000507944 CXCL16Q9H2A7 254 aa22.94■■□□□ 1.26
CLDND1-216ENST00000507944 DAXXQ9UER7 740 aaPredicted RBP22.94■■□□□ 1.26
CLDND1-216ENST00000507944 DENND4AQ7Z401 1863 aa22.94■■□□□ 1.26
CLDND1-216ENST00000507944 CCDC195A0A1B0GUA6 201 aa22.93■■□□□ 1.26
CLDND1-216ENST00000507944 CASTOR2A6NHX0 329 aa22.93■■□□□ 1.26
CLDND1-216ENST00000507944 BRD1O95696 1058 aa22.93■■□□□ 1.26
CLDND1-216ENST00000507944 SPATA31D3P0C874 917 aa22.93■■□□□ 1.26
CLDND1-216ENST00000507944 MYBP10242 640 aa22.93■■□□□ 1.26
CLDND1-216ENST00000507944 NHLH1Q02575 133 aa22.93■■□□□ 1.26
CLDND1-216ENST00000507944 DCAF4L1Q3SXM0 396 aa22.93■■□□□ 1.26
CLDND1-216ENST00000507944 RILPL1Q5EBL4 403 aa22.93■■□□□ 1.26
CLDND1-216ENST00000507944 IER5LQ5T953 404 aa22.93■■□□□ 1.26
CLDND1-216ENST00000507944 ATF7IP2Q5U623 682 aa22.93■■□□□ 1.26
CLDND1-216ENST00000507944 SPATA31D4Q6ZUB0 917 aa22.93■■□□□ 1.26
CLDND1-216ENST00000507944 OTOP3Q7RTS5 596 aa22.93■■□□□ 1.26
CLDND1-216ENST00000507944 PALB2Q86YC2 1186 aa22.93■■□□□ 1.26
CLDND1-216ENST00000507944 HDAC7Q8WUI4 952 aa22.93■■□□□ 1.26
CLDND1-216ENST00000507944 FNIP2Q9P278 1114 aa22.93■■□□□ 1.26
CLDND1-216ENST00000507944 GDAQ9Y2T3 454 aa22.93■■□□□ 1.26
CLDND1-216ENST00000507944 CACNA1HO95180 2353 aa22.92■■□□□ 1.26
CLDND1-216ENST00000507944 SF3B1O75533 1304 aaKnown RBP eCLIP22.92■■□□□ 1.26
CLDND1-216ENST00000507944 CCDC169A6NNP5 214 aa22.92■■□□□ 1.26
CLDND1-216ENST00000507944 C1RP00736 705 aa22.92■■□□□ 1.26
CLDND1-216ENST00000507944 PEX3P56589 373 aa22.92■■□□□ 1.26
CLDND1-216ENST00000507944 HASPINQ8TF76 798 aa22.92■■□□□ 1.26
CLDND1-216ENST00000507944 MMTAG2Q9BU76 263 aaKnown RBP22.92■■□□□ 1.26
CLDND1-216ENST00000507944 UPF2Q9HAU5 1272 aaKnown RBP22.92■■□□□ 1.26
CLDND1-216ENST00000507944 H3BQV1 296 aa22.91■■□□□ 1.26
CLDND1-216ENST00000507944 TGM5O43548 720 aa22.91■■□□□ 1.26
CLDND1-216ENST00000507944 HIP1RO75146 1068 aa22.91■■□□□ 1.26
CLDND1-216ENST00000507944 RFPL2O75678 378 aa22.91■■□□□ 1.26
CLDND1-216ENST00000507944 CD2BP2O95400 341 aaKnown RBP22.91■■□□□ 1.26
CLDND1-216ENST00000507944 RPL17P18621 184 aaKnown RBP22.91■■□□□ 1.26
CLDND1-216ENST00000507944 GJB2P29033 226 aa22.91■■□□□ 1.26
CLDND1-216ENST00000507944 NPTX2P47972 431 aa22.91■■□□□ 1.26
CLDND1-216ENST00000507944 CREMQ03060 361 aa22.91■■□□□ 1.26
CLDND1-216ENST00000507944 NAB2Q15742 525 aa22.91■■□□□ 1.26
CLDND1-216ENST00000507944 RINT1Q6NUQ1 792 aa22.91■■□□□ 1.26
CLDND1-216ENST00000507944 CYP26C1Q6V0L0 522 aa22.91■■□□□ 1.26
CLDND1-216ENST00000507944 APBB1IPQ7Z5R6 666 aaPredicted RBP22.91■■□□□ 1.26
CLDND1-216ENST00000507944 GLYCTKQ8IVS8 523 aa22.91■■□□□ 1.26
CLDND1-216ENST00000507944 DAW1Q8N136 415 aa22.91■■□□□ 1.26
CLDND1-216ENST00000507944 RHOBTB2Q9BYZ6 727 aa22.91■■□□□ 1.26
CLDND1-216ENST00000507944 SMOC2Q9H3U7 446 aa22.91■■□□□ 1.26
CLDND1-216ENST00000507944 PLEKHA4Q9H4M7 779 aa22.91■■□□□ 1.26
CLDND1-216ENST00000507944 TNFSF13BQ9Y275 285 aa22.91■■□□□ 1.26
CLDND1-216ENST00000507944 KIF4AO95239 1232 aa22.9■■□□□ 1.26
CLDND1-216ENST00000507944 ATP2C1P98194 919 aaPredicted RBP22.9■■□□□ 1.26
CLDND1-216ENST00000507944 DMP1Q13316 513 aaPredicted RBP22.9■■□□□ 1.26
CLDND1-216ENST00000507944 ZRSR1Q15695 479 aaKnown RBP22.9■■□□□ 1.26
CLDND1-216ENST00000507944 RTP2Q5QGT7 225 aa22.9■■□□□ 1.26
CLDND1-216ENST00000507944 FAM171A1Q5VUB5 890 aa22.9■■□□□ 1.26
CLDND1-216ENST00000507944 LILRA6Q6PI73 481 aa22.9■■□□□ 1.26
CLDND1-216ENST00000507944 C1orf186Q6ZWK4 172 aa22.9■■□□□ 1.26
CLDND1-216ENST00000507944 KCNK18Q7Z418 384 aa22.9■■□□□ 1.26
CLDND1-216ENST00000507944 ALYREFQ86V81 257 aaKnown RBP22.9■■□□□ 1.26
CLDND1-216ENST00000507944 DRC1Q96MC2 740 aa22.9■■□□□ 1.26
CLDND1-216ENST00000507944 PRRX2Q99811 253 aa22.9■■□□□ 1.26
CLDND1-216ENST00000507944 TTPALQ9BTX7 342 aa22.9■■□□□ 1.26
CLDND1-216ENST00000507944 RUSC1Q9BVN2 902 aa22.9■■□□□ 1.26
CLDND1-216ENST00000507944 TMEM134Q9H6X4 195 aa22.9■■□□□ 1.26
CLDND1-216ENST00000507944 PDGFBP01127 241 aaPredicted RBP22.89■■□□□ 1.25
CLDND1-216ENST00000507944 AVPR2P30518 371 aa22.89■■□□□ 1.25
CLDND1-216ENST00000507944 VCPP55072 806 aaKnown RBP22.89■■□□□ 1.25
CLDND1-216ENST00000507944 PRSS55Q6UWB4 352 aaPredicted RBP22.89■■□□□ 1.25
CLDND1-216ENST00000507944 CEP57Q86XR8 500 aa22.89■■□□□ 1.25
CLDND1-216ENST00000507944 PRSS33Q8NF86 280 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms