RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 DDX11Q96FC9 970 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 PDLIM2Q96JY6 352 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 EIF2AK1Q9BQI3 630 aaKnown RBP7.88□□□□□ -1.15
CLCN3-206ENST00000507875 WDR18Q9BV38 432 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 APOL5Q9BWW9 433 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 TMEM39BQ9GZU3 492 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 CLIC5Q9NZA1 410 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 GTF2IRD1Q9UHL9 959 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 RABL2BQ9UNT1 228 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 AGR2O95994 175 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 CPB1P15086 417 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 IGFALSP35858 605 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 IL2P60568 153 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 LLGL1Q15334 1064 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 MINDY4Q4G0A6 757 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 TAF3Q5VWG9 929 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 CST9Q5W186 159 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 FAM160B2Q86V87 743 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 AHI1Q8N157 1196 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 C2orf69Q8N8R5 385 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 SNIP1Q8TAD8 396 aaKnown RBP7.87□□□□□ -1.15
CLCN3-206ENST00000507875 LPAR1Q92633 364 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 WNK4Q96J92 1243 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 MYL10Q9BUA6 226 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 PHF20Q9BVI0 1012 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 CCDC94Q9BW85 323 aaPredicted RBP7.87□□□□□ -1.15
CLCN3-206ENST00000507875 SEC63Q9UGP8 760 aaKnown RBP7.87□□□□□ -1.15
CLCN3-206ENST00000507875 EVLQ9UI08 416 aaPredicted RBP7.87□□□□□ -1.15
CLCN3-206ENST00000507875 TRPM7Q96QT4 1865 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 PTPRFP10586 1907 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 TTC24A2A3L6 582 aaPredicted RBP7.87□□□□□ -1.15
CLCN3-206ENST00000507875 ZNF862O60290 1169 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 SNUPNO95149 360 aaKnown RBP7.87□□□□□ -1.15
CLCN3-206ENST00000507875 FKBP9O95302 570 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 BMP15O95972 392 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 GH2P01242 217 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 F11P03951 625 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 ASLP04424 464 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 FAM157BP0CG42 384 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 MAN1A1P33908 653 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 NF2P35240 595 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 NRLP54845 237 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 ORC2Q13416 577 aaPredicted RBP7.87□□□□□ -1.15
CLCN3-206ENST00000507875 PKN1Q16512 942 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 SLFN13Q68D06 897 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 DENND5AQ6IQ26 1287 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 KCNT2Q6UVM3 1135 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 FKBP9P1Q75LS8 142 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 SAPCD2Q86UD0 394 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 CLRN3Q8NCR9 226 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 RNF214Q8ND24 703 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 BICD2Q8TD16 824 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 CAPNS2Q96L46 248 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 EMC7Q9NPA0 242 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 GGA3Q9NZ52 723 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 TMCC3Q9ULS5 477 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 DNM3Q9UQ16 869 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 COQ6Q9Y2Z9 468 aa7.87□□□□□ -1.15
CLCN3-206ENST00000507875 hCG_1642624A0A1W2PR95 340 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 LCHNA4D1U4 455 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 TTLL8A6PVC2 850 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 C19orf81C9J6K1 198 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 SHOXO15266 292 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 PLEKHA8P1O95397 391 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 HOXD8P13378 290 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-206ENST00000507875 RXRAP19793 462 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 CCND1P24385 295 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 KRT2P35908 639 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 MAP2K2P36507 400 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 KIF23Q02241 960 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-206ENST00000507875 GRM1Q13255 1194 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 HS1BP3Q53T59 392 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 WDR44Q5JSH3 913 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 CCDC144CPQ8IYA2 1237 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 SCYL3Q8IZE3 742 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 CPXCR1Q8N123 301 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 CHURC1Q8WUH1 139 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 PHKBQ93100 1093 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 KIAA1683Q9H0B3 1180 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 VCPKMTQ9H867 229 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 ZNF451Q9Y4E5 1061 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 F5H6K3 240 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 YEATS4O95619 227 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 BMP3P12645 472 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 GNA11P29992 359 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 CTCFP49711 727 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-206ENST00000507875 RENBPP51606 427 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 GPLD1P80108 840 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 DSG1Q02413 1049 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 KLRC3Q07444 240 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 GBX1Q14549 363 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 NKG7Q16617 165 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 RILPL1Q5EBL4 403 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 PGM2L1Q6PCE3 622 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 RIPOR1Q6ZS17 1223 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 SIAH1Q8IUQ4 282 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 PHACTR4Q8IZ21 702 aa7.86□□□□□ -1.15
CLCN3-206ENST00000507875 TRMT2BQ96GJ1 504 aaKnown RBP7.86□□□□□ -1.15
CLCN3-206ENST00000507875 GBA2Q9HCG7 927 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-206ENST00000507875 BARHL2Q9NY43 387 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms