RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 XPNPEP1Q9NQW7 623 aa8.88□□□□□ -0.99
SCN1A-207ENST00000507401 CGNQ9P2M7 1197 aaKnown RBP8.88□□□□□ -0.99
SCN1A-207ENST00000507401 KANSL3Q9P2N6 904 aa8.88□□□□□ -0.99
SCN1A-207ENST00000507401 STK39Q9UEW8 545 aa8.88□□□□□ -0.99
SCN1A-207ENST00000507401 PIN4Q9Y237 131 aaKnown RBP8.88□□□□□ -0.99
SCN1A-207ENST00000507401 PCDHB2Q9Y5E7 798 aa8.88□□□□□ -0.99
SCN1A-207ENST00000507401 PLXNA4Q9HCM2 1894 aa8.87□□□□□ -0.99
SCN1A-207ENST00000507401 CNTNAP2Q9UHC6 1331 aa8.87□□□□□ -0.99
SCN1A-207ENST00000507401 PI4K2BG5E9Z4 385 aa8.87□□□□□ -0.99
SCN1A-207ENST00000507401 CTIFO43310 598 aaKnown RBP8.87□□□□□ -0.99
SCN1A-207ENST00000507401 OR52Z1P0C646 297 aa8.87□□□□□ -0.99
SCN1A-207ENST00000507401 IL9P15248 144 aa8.87□□□□□ -0.99
SCN1A-207ENST00000507401 ATP2B1P20020 1258 aa8.87□□□□□ -0.99
SCN1A-207ENST00000507401 NRIP1P48552 1158 aa8.87□□□□□ -0.99
SCN1A-207ENST00000507401 BCAR1P56945 870 aa8.87□□□□□ -0.99
SCN1A-207ENST00000507401 DLX2Q07687 328 aaPredicted RBP8.87□□□□□ -0.99
SCN1A-207ENST00000507401 SMAD4Q13485 552 aaKnown RBP8.87□□□□□ -0.99
SCN1A-207ENST00000507401 GNL2Q13823 731 aaKnown RBP8.87□□□□□ -0.99
SCN1A-207ENST00000507401 GIT2Q14161 759 aa8.87□□□□□ -0.99
SCN1A-207ENST00000507401 BMS1Q14692 1282 aaKnown RBP8.87□□□□□ -0.99
SCN1A-207ENST00000507401 ZNF174Q15697 407 aa8.87□□□□□ -0.99
SCN1A-207ENST00000507401 DUSP6Q16828 381 aa8.87□□□□□ -0.99
SCN1A-207ENST00000507401 TTC38Q5R3I4 469 aa8.87□□□□□ -0.99
SCN1A-207ENST00000507401 EP400NLQ6ZTU2 488 aa8.87□□□□□ -0.99
SCN1A-207ENST00000507401 SLC39A11Q8N1S5 342 aa8.87□□□□□ -0.99
SCN1A-207ENST00000507401 MCPH1Q8NEM0 835 aa8.87□□□□□ -0.99
SCN1A-207ENST00000507401 HELQQ8TDG4 1101 aa8.87□□□□□ -0.99
SCN1A-207ENST00000507401 CCDC51Q96ER9 411 aa8.87□□□□□ -0.99
SCN1A-207ENST00000507401 INTS4Q96HW7 963 aaKnown RBP8.87□□□□□ -0.99
SCN1A-207ENST00000507401 MSLNLQ96KJ4 702 aa8.87□□□□□ -0.99
SCN1A-207ENST00000507401 CCDC43Q96MW1 224 aaKnown RBP8.87□□□□□ -0.99
SCN1A-207ENST00000507401 RBSNQ9H1K0 784 aa8.87□□□□□ -0.99
SCN1A-207ENST00000507401 MINDY3Q9H8M7 445 aa8.87□□□□□ -0.99
SCN1A-207ENST00000507401 CLEC1BQ9P126 229 aa8.87□□□□□ -0.99
SCN1A-207ENST00000507401 CD207Q9UJ71 328 aa8.87□□□□□ -0.99
SCN1A-207ENST00000507401 ATG2AQ2TAZ0 1938 aa8.87□□□□□ -0.99
SCN1A-207ENST00000507401 LAD1O00515 517 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 MBTPS2O43462 519 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 TBX10O75333 385 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 AVPP01185 164 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 ALDH2P05091 517 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 SRGAP2BP0DMP2 458 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 ALADP13716 330 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 GLRA2P23416 452 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 NDUFV1P49821 464 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 KCNC3Q14003 757 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 NOMO2Q5JPE7 1267 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 UBXN11Q5T124 520 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 MCTP1Q6DN14 999 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 DESI1Q6ICB0 168 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 NOTUMQ6P988 496 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 TMC7Q7Z402 723 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 ADGRD2Q7Z7M1 963 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 RBM23Q86U06 439 aaKnown RBP8.86□□□□□ -0.99
SCN1A-207ENST00000507401 ADHFE1Q8IWW8 467 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 MRPL43Q8N983 215 aaKnown RBP8.86□□□□□ -0.99
SCN1A-207ENST00000507401 PRR7Q8TB68 274 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 PIGOQ8TEQ8 1089 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 TMEM169Q96HH4 297 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 POP1Q99575 1024 aaKnown RBP8.86□□□□□ -0.99
SCN1A-207ENST00000507401 TCF25Q9BQ70 676 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 RAB34Q9BZG1 259 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 CD320Q9NPF0 282 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 TBC1D13Q9NVG8 400 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 PAXBP1Q9Y5B6 917 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 IRAK3Q9Y616 596 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 ARID2Q68CP9 1835 aa8.86□□□□□ -0.99
SCN1A-207ENST00000507401 A0A1B0GUA9 196 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 INO80B-WBP1J3KQ70 363 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 PER2O15055 1255 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 INPPL1O15357 1258 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 LINC01565O15544 149 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 TSPAN1O60635 241 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 GPR37L1O60883 481 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 MED24O75448 989 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 ERLIN2O94905 339 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 GALTP07902 379 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 HOXB8P17481 243 aaPredicted RBP8.85□□□□□ -0.99
SCN1A-207ENST00000507401 CYP11B2P19099 503 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 PRPHP41219 470 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 TOB1P50616 345 aaPredicted RBP8.85□□□□□ -0.99
SCN1A-207ENST00000507401 ZP2Q05996 745 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 MBTD1Q05BQ5 628 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 CAPSQ13938 189 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 DHX8Q14562 1220 aaKnown RBP8.85□□□□□ -0.99
SCN1A-207ENST00000507401 SMC1AQ14683 1233 aaKnown RBP8.85□□□□□ -0.99
SCN1A-207ENST00000507401 PTPRNQ16849 979 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 FAM187BQ17R55 369 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 RILPL1Q5EBL4 403 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 HAUS3Q68CZ6 603 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 AGMOQ6ZNB7 445 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 DDX53Q86TM3 631 aaKnown RBP8.85□□□□□ -0.99
SCN1A-207ENST00000507401 HACE1Q8IYU2 909 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 KCTD17Q8N5Z5 321 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 IGSF22Q8N9C0 903 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 SMRP1Q8NCR6 262 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 URGCPQ8TCY9 931 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 LPPQ93052 612 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 IGSF21Q96ID5 467 aa8.85□□□□□ -0.99
SCN1A-207ENST00000507401 TMX3Q96JJ7 454 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms