RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 INF2Q27J81 1249 aa18.3■□□□□ 0.52
SNF8-205ENST00000507302 SLC44A4Q53GD3 710 aa18.3■□□□□ 0.52
SNF8-205ENST00000507302 OTUD6AQ7L8S5 288 aa18.3■□□□□ 0.52
SNF8-205ENST00000507302 KRT25Q7Z3Z0 450 aa18.3■□□□□ 0.52
SNF8-205ENST00000507302 GRASPQ7Z6J2 395 aaPredicted RBP18.3■□□□□ 0.52
SNF8-205ENST00000507302 FGF13Q92913 245 aa18.3■□□□□ 0.52
SNF8-205ENST00000507302 CPB2Q96IY4 423 aa18.3■□□□□ 0.52
SNF8-205ENST00000507302 MTRQ99707 1265 aa18.3■□□□□ 0.52
SNF8-205ENST00000507302 BCO2Q9BYV7 579 aa18.3■□□□□ 0.52
SNF8-205ENST00000507302 EPC1Q9H2F5 836 aa18.3■□□□□ 0.52
SNF8-205ENST00000507302 MTF2Q9Y483 593 aaPredicted RBP18.3■□□□□ 0.52
SNF8-205ENST00000507302 ZFHX4Q86UP3 3567 aa18.29■□□□□ 0.52
SNF8-205ENST00000507302 A0A1B0GUA9 196 aa18.29■□□□□ 0.52
SNF8-205ENST00000507302 SHISA7A6NL88 538 aa18.29■□□□□ 0.52
SNF8-205ENST00000507302 ZBTB39O15060 712 aa18.29■□□□□ 0.52
SNF8-205ENST00000507302 CDC45O75419 566 aa18.29■□□□□ 0.52
SNF8-205ENST00000507302 LYPLA2O95372 231 aa18.29■□□□□ 0.52
SNF8-205ENST00000507302 GCFC2P16383 781 aaKnown RBP18.29■□□□□ 0.52
SNF8-205ENST00000507302 ARL2P36404 184 aa18.29■□□□□ 0.52
SNF8-205ENST00000507302 FZD5Q13467 585 aa18.29■□□□□ 0.52
SNF8-205ENST00000507302 SNW1Q13573 536 aaKnown RBP18.29■□□□□ 0.52
SNF8-205ENST00000507302 TRIM22Q8IYM9 498 aa18.29■□□□□ 0.52
SNF8-205ENST00000507302 LNX1Q8TBB1 728 aaPredicted RBP18.29■□□□□ 0.52
SNF8-205ENST00000507302 CNTNAP3BQ96NU0 1288 aa18.29■□□□□ 0.52
SNF8-205ENST00000507302 HINFPQ9BQA5 517 aa18.29■□□□□ 0.52
SNF8-205ENST00000507302 CNTNAP3Q9BZ76 1288 aa18.29■□□□□ 0.52
SNF8-205ENST00000507302 ZSWIM4Q9H7M6 989 aa18.29■□□□□ 0.52
SNF8-205ENST00000507302 RGL1Q9NZL6 768 aa18.29■□□□□ 0.52
SNF8-205ENST00000507302 SF3B1O75533 1304 aaKnown RBP eCLIP18.28■□□□□ 0.52
SNF8-205ENST00000507302 RPS9P46781 194 aaKnown RBP18.28■□□□□ 0.52
SNF8-205ENST00000507302 SSRP1Q08945 709 aaKnown RBP18.28■□□□□ 0.52
SNF8-205ENST00000507302 NCBP1Q09161 790 aaKnown RBP18.28■□□□□ 0.52
SNF8-205ENST00000507302 CAPSQ13938 189 aa18.28■□□□□ 0.52
SNF8-205ENST00000507302 TOB2Q14106 344 aaPredicted RBP18.28■□□□□ 0.52
SNF8-205ENST00000507302 HSP90AA2PQ14568 343 aaPredicted RBP18.28■□□□□ 0.52
SNF8-205ENST00000507302 NAB2Q15742 525 aa18.28■□□□□ 0.52
SNF8-205ENST00000507302 XKR9Q5GH70 373 aa18.28■□□□□ 0.52
SNF8-205ENST00000507302 SLC27A1Q6PCB7 646 aa18.28■□□□□ 0.52
SNF8-205ENST00000507302 PRSS55Q6UWB4 352 aaPredicted RBP18.28■□□□□ 0.52
SNF8-205ENST00000507302 RTL10Q7L3V2 364 aa18.28■□□□□ 0.52
SNF8-205ENST00000507302 GLYCTKQ8IVS8 523 aa18.28■□□□□ 0.52
SNF8-205ENST00000507302 HACE1Q8IYU2 909 aa18.28■□□□□ 0.52
SNF8-205ENST00000507302 PAAF1Q9BRP4 392 aa18.28■□□□□ 0.52
SNF8-205ENST00000507302 LTB4R2Q9NPC1 389 aa18.28■□□□□ 0.52
SNF8-205ENST00000507302 COL4A2P08572 1712 aa18.28■□□□□ 0.52
SNF8-205ENST00000507302 LAMTOR5O43504 91 aa18.27■□□□□ 0.52
SNF8-205ENST00000507302 SLITRK3O94933 977 aa18.27■□□□□ 0.52
SNF8-205ENST00000507302 AKAP5P24588 427 aa18.27■□□□□ 0.52
SNF8-205ENST00000507302 ATXN1P54253 815 aaKnown RBP18.27■□□□□ 0.52
SNF8-205ENST00000507302 NTHL1P78549 312 aa18.27■□□□□ 0.52
SNF8-205ENST00000507302 PFKPQ01813 784 aa18.27■□□□□ 0.52
SNF8-205ENST00000507302 TFDP1Q14186 410 aa18.27■□□□□ 0.52
SNF8-205ENST00000507302 UVSSAQ2YD98 709 aa18.27■□□□□ 0.52
SNF8-205ENST00000507302 MAMSTRQ6ZN01 415 aa18.27■□□□□ 0.52
SNF8-205ENST00000507302 NEK8Q86SG6 692 aa18.27■□□□□ 0.52
SNF8-205ENST00000507302 ZNF687Q8N1G0 1237 aa18.27■□□□□ 0.52
SNF8-205ENST00000507302 ST13P5Q8NFI4 369 aaPredicted RBP18.27■□□□□ 0.52
SNF8-205ENST00000507302 ITFG1Q8TB96 612 aa18.27■□□□□ 0.52
SNF8-205ENST00000507302 ASAP3Q8TDY4 903 aa18.27■□□□□ 0.52
SNF8-205ENST00000507302 ZNF274Q96GC6 653 aaPredicted RBP18.27■□□□□ 0.52
SNF8-205ENST00000507302 DYDC2Q96IM9 177 aa18.27■□□□□ 0.52
SNF8-205ENST00000507302 AIFM3Q96NN9 605 aa18.27■□□□□ 0.52
SNF8-205ENST00000507302 TTPALQ9BTX7 342 aa18.27■□□□□ 0.52
SNF8-205ENST00000507302 PHF20Q9BVI0 1012 aa18.27■□□□□ 0.52
SNF8-205ENST00000507302 PRMT8Q9NR22 394 aaPredicted RBP18.27■□□□□ 0.52
SNF8-205ENST00000507302 BMP2KQ9NSY1 1161 aaPredicted RBP18.27■□□□□ 0.52
SNF8-205ENST00000507302 SPATA6Q9NWH7 488 aaPredicted RBP18.27■□□□□ 0.52
SNF8-205ENST00000507302 ZSCAN32Q9NX65 697 aa18.27■□□□□ 0.52
SNF8-205ENST00000507302 KCNH3Q9ULD8 1083 aa18.27■□□□□ 0.52
SNF8-205ENST00000507302 FAM170BA6NMN3 283 aa18.26■□□□□ 0.51
SNF8-205ENST00000507302 PRR5-ARHGAP8B1AHC4 643 aa18.26■□□□□ 0.51
SNF8-205ENST00000507302 INO80B-WBP1J3KQ70 363 aa18.26■□□□□ 0.51
SNF8-205ENST00000507302 B4GALT5O43286 388 aa18.26■□□□□ 0.51
SNF8-205ENST00000507302 TADA2AO75478 443 aa18.26■□□□□ 0.51
SNF8-205ENST00000507302 C8AP07357 584 aa18.26■□□□□ 0.51
SNF8-205ENST00000507302 GLRA2P23416 452 aa18.26■□□□□ 0.51
SNF8-205ENST00000507302 ARHGAP8P85298 464 aa18.26■□□□□ 0.51
SNF8-205ENST00000507302 TUSC3Q13454 348 aa18.26■□□□□ 0.51
SNF8-205ENST00000507302 PPP4R3CPQ6ZMV5 832 aa18.26■□□□□ 0.51
SNF8-205ENST00000507302 NELL2Q99435 816 aa18.26■□□□□ 0.51
SNF8-205ENST00000507302 HSD17B14Q9BPX1 270 aa18.26■□□□□ 0.51
SNF8-205ENST00000507302 CHD8Q9HCK8 2581 aa18.25■□□□□ 0.51
SNF8-205ENST00000507302 PTGESO14684 152 aa18.25■□□□□ 0.51
SNF8-205ENST00000507302 ADAM12O43184 909 aa18.25■□□□□ 0.51
SNF8-205ENST00000507302 DGAT1O75907 488 aa18.25■□□□□ 0.51
SNF8-205ENST00000507302 KRT37O76014 449 aa18.25■□□□□ 0.51
SNF8-205ENST00000507302 TDGF1P13385 188 aa18.25■□□□□ 0.51
SNF8-205ENST00000507302 PSMA5P28066 241 aa18.25■□□□□ 0.51
SNF8-205ENST00000507302 CSTF1Q05048 431 aaKnown RBP18.25■□□□□ 0.51
SNF8-205ENST00000507302 RAB33AQ14088 237 aa18.25■□□□□ 0.51
SNF8-205ENST00000507302 PSMD5Q16401 504 aa18.25■□□□□ 0.51
SNF8-205ENST00000507302 PPM1LQ5SGD2 360 aa18.25■□□□□ 0.51
SNF8-205ENST00000507302 ZBTB41Q5SVQ8 909 aa18.25■□□□□ 0.51
SNF8-205ENST00000507302 PDXDC1Q6P996 788 aa18.25■□□□□ 0.51
SNF8-205ENST00000507302 NPAS3Q8IXF0 933 aa18.25■□□□□ 0.51
SNF8-205ENST00000507302 RABGGTAQ92696 567 aa18.25■□□□□ 0.51
SNF8-205ENST00000507302 APOL6Q9BWW8 343 aa18.25■□□□□ 0.51
SNF8-205ENST00000507302 FAM126AQ9BYI3 521 aaPredicted RBP18.25■□□□□ 0.51
SNF8-205ENST00000507302 TRIM6Q9C030 488 aaPredicted RBP18.25■□□□□ 0.51
SNF8-205ENST00000507302 SLKQ9H2G2 1235 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms