RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 APBB1IPQ7Z5R6 666 aaPredicted RBP19.9■□□□□ 0.78
NPHP4-210ENST00000506941 TCHPQ9BT92 498 aa19.9■□□□□ 0.78
NPHP4-210ENST00000506941 PLVAPQ9BX97 442 aa19.9■□□□□ 0.78
NPHP4-210ENST00000506941 NRDE2Q9H7Z3 1164 aa19.9■□□□□ 0.78
NPHP4-210ENST00000506941 DNAJB4Q9UDY4 337 aa19.9■□□□□ 0.78
NPHP4-210ENST00000506941 PLAGL2Q9UPG8 496 aa19.9■□□□□ 0.78
NPHP4-210ENST00000506941 PVALEFA0A1B0GWK0 134 aa19.89■□□□□ 0.77
NPHP4-210ENST00000506941 CLDN3O15551 220 aa19.89■□□□□ 0.77
NPHP4-210ENST00000506941 MEFVO15553 781 aaPredicted RBP19.89■□□□□ 0.77
NPHP4-210ENST00000506941 ZC3H11AO75152 810 aaKnown RBP eCLIP19.89■□□□□ 0.77
NPHP4-210ENST00000506941 DDHD2O94830 711 aa19.89■□□□□ 0.77
NPHP4-210ENST00000506941 ITGB1P05556 798 aa19.89■□□□□ 0.77
NPHP4-210ENST00000506941 RB1P06400 928 aa19.89■□□□□ 0.77
NPHP4-210ENST00000506941 FOSL2P15408 326 aa19.89■□□□□ 0.77
NPHP4-210ENST00000506941 LAG3P18627 525 aa19.89■□□□□ 0.77
NPHP4-210ENST00000506941 OSTNP61366 133 aa19.89■□□□□ 0.77
NPHP4-210ENST00000506941 GPM6BQ13491 265 aa19.89■□□□□ 0.77
NPHP4-210ENST00000506941 SEZ6Q53EL9 994 aa19.89■□□□□ 0.77
NPHP4-210ENST00000506941 FAM26FQ5R3K3 315 aa19.89■□□□□ 0.77
NPHP4-210ENST00000506941 EPM2AIP1Q7L775 607 aaPredicted RBP19.89■□□□□ 0.77
NPHP4-210ENST00000506941 THNSL1Q8IYQ7 743 aa19.89■□□□□ 0.77
NPHP4-210ENST00000506941 KLHL23Q8NBE8 558 aa19.89■□□□□ 0.77
NPHP4-210ENST00000506941 P2RX5Q93086 422 aa19.89■□□□□ 0.77
NPHP4-210ENST00000506941 GAS2L1Q99501 681 aaPredicted RBP19.89■□□□□ 0.77
NPHP4-210ENST00000506941 C11orf84Q9BUA3 381 aaPredicted RBP19.89■□□□□ 0.77
NPHP4-210ENST00000506941 GBP3Q9H0R5 595 aa19.89■□□□□ 0.77
NPHP4-210ENST00000506941 PCDHB13Q9Y5F0 798 aa19.89■□□□□ 0.77
NPHP4-210ENST00000506941 PTGESO14684 152 aa19.88■□□□□ 0.77
NPHP4-210ENST00000506941 GRM6O15303 877 aa19.88■□□□□ 0.77
NPHP4-210ENST00000506941 FAM189A1O60320 539 aa19.88■□□□□ 0.77
NPHP4-210ENST00000506941 NR1I2O75469 434 aa19.88■□□□□ 0.77
NPHP4-210ENST00000506941 PRPF6O94906 941 aaKnown RBP19.88■□□□□ 0.77
NPHP4-210ENST00000506941 HOXD13P35453 343 aa19.88■□□□□ 0.77
NPHP4-210ENST00000506941 BCAR1P56945 870 aa19.88■□□□□ 0.77
NPHP4-210ENST00000506941 RNASELQ05823 741 aaKnown RBP19.88■□□□□ 0.77
NPHP4-210ENST00000506941 DPYDQ12882 1025 aa19.88■□□□□ 0.77
NPHP4-210ENST00000506941 ALCAMQ13740 583 aa19.88■□□□□ 0.77
NPHP4-210ENST00000506941 KCNT2Q6UVM3 1135 aa19.88■□□□□ 0.77
NPHP4-210ENST00000506941 ACCSQ96QU6 501 aa19.88■□□□□ 0.77
NPHP4-210ENST00000506941 ALG13Q9NP73 1137 aaKnown RBP19.88■□□□□ 0.77
NPHP4-210ENST00000506941 AAASQ9NRG9 546 aa19.88■□□□□ 0.77
NPHP4-210ENST00000506941 KANSL3Q9P2N6 904 aa19.88■□□□□ 0.77
NPHP4-210ENST00000506941 PCDHB12Q9Y5F1 795 aa19.88■□□□□ 0.77
NPHP4-210ENST00000506941 VWA8A3KMH1 1905 aa19.87■□□□□ 0.77
NPHP4-210ENST00000506941 A0A0B4J269 797 aa19.87■□□□□ 0.77
NPHP4-210ENST00000506941 MYL1P05976 194 aa19.87■□□□□ 0.77
NPHP4-210ENST00000506941 IGFBP4P22692 258 aa19.87■□□□□ 0.77
NPHP4-210ENST00000506941 MATR3P43243 847 aaKnown RBP eCLIP19.87■□□□□ 0.77
NPHP4-210ENST00000506941 DSC1Q08554 894 aa19.87■□□□□ 0.77
NPHP4-210ENST00000506941 KMT5BQ4FZB7 885 aa19.87■□□□□ 0.77
NPHP4-210ENST00000506941 ZBTB41Q5SVQ8 909 aa19.87■□□□□ 0.77
NPHP4-210ENST00000506941 CLEC17AQ6ZS10 378 aa19.87■□□□□ 0.77
NPHP4-210ENST00000506941 TMEM173Q86WV6 379 aaPredicted RBP19.87■□□□□ 0.77
NPHP4-210ENST00000506941 ZNF558Q96NG5 402 aa19.87■□□□□ 0.77
NPHP4-210ENST00000506941 STXBP5LQ9Y2K9 1186 aa19.87■□□□□ 0.77
NPHP4-210ENST00000506941 MTCH2Q9Y6C9 303 aa19.87■□□□□ 0.77
NPHP4-210ENST00000506941 STYXL1Q9Y6J8 313 aa19.87■□□□□ 0.77
NPHP4-210ENST00000506941 NT5C1B-RDH14C9J2C7 533 aa19.86■□□□□ 0.77
NPHP4-210ENST00000506941 EIF3DO15371 548 aaKnown RBP eCLIP19.86■□□□□ 0.77
NPHP4-210ENST00000506941 FGF18O76093 207 aa19.86■□□□□ 0.77
NPHP4-210ENST00000506941 RPN1P04843 607 aaKnown RBP19.86■□□□□ 0.77
NPHP4-210ENST00000506941 POU3F3P20264 500 aaPredicted RBP19.86■□□□□ 0.77
NPHP4-210ENST00000506941 DNAJB1P25685 340 aa19.86■□□□□ 0.77
NPHP4-210ENST00000506941 ADSSP30520 456 aa19.86■□□□□ 0.77
NPHP4-210ENST00000506941 TNFSF9P41273 254 aa19.86■□□□□ 0.77
NPHP4-210ENST00000506941 SLC11A1P49279 550 aa19.86■□□□□ 0.77
NPHP4-210ENST00000506941 GRIK3Q13003 919 aa19.86■□□□□ 0.77
NPHP4-210ENST00000506941 CAMK1Q14012 370 aa19.86■□□□□ 0.77
NPHP4-210ENST00000506941 NAB2Q15742 525 aa19.86■□□□□ 0.77
NPHP4-210ENST00000506941 ALKAL1Q6UXT8 129 aa19.86■□□□□ 0.77
NPHP4-210ENST00000506941 COLGALT2Q8IYK4 626 aa19.86■□□□□ 0.77
NPHP4-210ENST00000506941 SLC39A11Q8N1S5 342 aa19.86■□□□□ 0.77
NPHP4-210ENST00000506941 SPPL3Q8TCT6 385 aa19.86■□□□□ 0.77
NPHP4-210ENST00000506941 BCL7CQ8WUZ0 217 aaPredicted RBP19.86■□□□□ 0.77
NPHP4-210ENST00000506941 RPS6KC1Q96S38 1066 aa19.86■□□□□ 0.77
NPHP4-210ENST00000506941 MSTO1Q9BUK6 570 aa19.86■□□□□ 0.77
NPHP4-210ENST00000506941 CCDC94Q9BW85 323 aaPredicted RBP19.86■□□□□ 0.77
NPHP4-210ENST00000506941 SLC39A2Q9NP94 309 aa19.86■□□□□ 0.77
NPHP4-210ENST00000506941 OGTO15294 1046 aa19.85■□□□□ 0.77
NPHP4-210ENST00000506941 GALTP07902 379 aa19.85■□□□□ 0.77
NPHP4-210ENST00000506941 PNOCQ13519 176 aa19.85■□□□□ 0.77
NPHP4-210ENST00000506941 POSTNQ15063 836 aa19.85■□□□□ 0.77
NPHP4-210ENST00000506941 GLRA4Q5JXX5 417 aa19.85■□□□□ 0.77
NPHP4-210ENST00000506941 KIAA0895Q8NCT3 520 aa19.85■□□□□ 0.77
NPHP4-210ENST00000506941 ZNF507Q8TCN5 953 aa19.85■□□□□ 0.77
NPHP4-210ENST00000506941 SCFD1Q8WVM8 642 aa19.85■□□□□ 0.77
NPHP4-210ENST00000506941 SNX27Q96L92 541 aa19.85■□□□□ 0.77
NPHP4-210ENST00000506941 ACAP3Q96P50 834 aa19.85■□□□□ 0.77
NPHP4-210ENST00000506941 EXOC1Q9NV70 894 aa19.85■□□□□ 0.77
NPHP4-210ENST00000506941 SPG21Q9NZD8 308 aa19.85■□□□□ 0.77
NPHP4-210ENST00000506941 CACNG4Q9UBN1 327 aa19.85■□□□□ 0.77
NPHP4-210ENST00000506941 EXOC7Q9UPT5 735 aa19.85■□□□□ 0.77
NPHP4-210ENST00000506941 XIRP2A4UGR9 3374 aa19.85■□□□□ 0.77
NPHP4-210ENST00000506941 BRWD1Q9NSI6 2320 aa19.85■□□□□ 0.77
NPHP4-210ENST00000506941 PRPF40AO75400 957 aaKnown RBP19.84■□□□□ 0.77
NPHP4-210ENST00000506941 CXCL8P10145 99 aa19.84■□□□□ 0.77
NPHP4-210ENST00000506941 ALDH7A1P49419 539 aaKnown RBP19.84■□□□□ 0.77
NPHP4-210ENST00000506941 STK4Q13043 487 aa19.84■□□□□ 0.77
NPHP4-210ENST00000506941 SLC10A6Q3KNW5 377 aa19.84■□□□□ 0.77
NPHP4-210ENST00000506941 XKR4Q5GH76 650 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms