RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 ABHD2P08910 425 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 MUTP22033 750 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 NOVP48745 357 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 SLC12A3P55017 1021 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 TCERG1LQ5VWI1 586 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 ADAT2Q7Z6V5 191 aaKnown RBP16.98■□□□□ 0.31
SCLT1-208ENST00000506368 NEDD1Q8NHV4 660 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 FAM81AQ8TBF8 368 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 SLC7A6OSQ96CW6 309 aaPredicted RBP16.98■□□□□ 0.31
SCLT1-208ENST00000506368 SNF8Q96H20 258 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 NR1H4Q96RI1 486 aaPredicted RBP16.98■□□□□ 0.31
SCLT1-208ENST00000506368 TMEM260Q9NX78 707 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 ZMYND8Q9ULU4 1186 aaPredicted RBP16.98■□□□□ 0.31
SCLT1-208ENST00000506368 SMG5Q9UPR3 1016 aaKnown RBP16.98■□□□□ 0.31
SCLT1-208ENST00000506368 KIAA1024Q9UPX6 916 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 CHKBQ9Y259 395 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 PRPF4O43172 522 aaKnown RBP eCLIP16.97■□□□□ 0.31
SCLT1-208ENST00000506368 COPB2P35606 906 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 SNX1Q13596 522 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 SPARCL1Q14515 664 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 CCDC6Q16204 474 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 SMC1BQ8NDV3 1235 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 UHMK1Q8TAS1 419 aaKnown RBP16.97■□□□□ 0.31
SCLT1-208ENST00000506368 GDAP1Q8TB36 358 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 HAS1Q92839 578 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 DDX23Q9BUQ8 820 aaKnown RBP16.97■□□□□ 0.31
SCLT1-208ENST00000506368 DHX36Q9H2U1 1008 aaKnown RBP16.97■□□□□ 0.31
SCLT1-208ENST00000506368 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.97■□□□□ 0.31
SCLT1-208ENST00000506368 IGSF9BQ9UPX0 1349 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 SIGLEC16A6NMB1 481 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 E9PMD0 336 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 EDIL3O43854 480 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 GOLGA8HP0CJ92 632 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 ABCB4P21439 1286 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 PSMC2P35998 433 aaKnown RBP16.97■□□□□ 0.31
SCLT1-208ENST00000506368 GPC5P78333 572 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 GSTO1P78417 241 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 DRAP1Q14919 205 aaPredicted RBP16.97■□□□□ 0.31
SCLT1-208ENST00000506368 ASPRV1Q53RT3 343 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 OTUD6AQ7L8S5 288 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 CCDC25Q86WR0 208 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 B4GALNT2Q8NHY0 566 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 NLRP3Q96P20 1036 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 THAP2Q9H0W7 228 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 MMADHCQ9H3L0 296 aaPredicted RBP16.97■□□□□ 0.31
SCLT1-208ENST00000506368 NMRK1Q9NWW6 199 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 IRAK4Q9NWZ3 460 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 TMOD4Q9NZQ9 345 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 DNAJC12Q9UKB3 198 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 PHTF1Q9UMS5 762 aa16.97■□□□□ 0.31
SCLT1-208ENST00000506368 ASMTLO95671 621 aa16.96■□□□□ 0.31
SCLT1-208ENST00000506368 DPEP1P16444 411 aa16.96■□□□□ 0.31
SCLT1-208ENST00000506368 RASA1P20936 1047 aa16.96■□□□□ 0.31
SCLT1-208ENST00000506368 TARSP26639 723 aaKnown RBP16.96■□□□□ 0.31
SCLT1-208ENST00000506368 CLK2P49760 499 aaKnown RBP16.96■□□□□ 0.31
SCLT1-208ENST00000506368 SF3B3Q15393 1217 aaKnown RBP16.96■□□□□ 0.31
SCLT1-208ENST00000506368 SLFN12Q8IYM2 578 aa16.96■□□□□ 0.31
SCLT1-208ENST00000506368 ERMNQ8TAM6 284 aa16.96■□□□□ 0.31
SCLT1-208ENST00000506368 ARHGEF26Q96DR7 871 aa16.96■□□□□ 0.31
SCLT1-208ENST00000506368 RBM41Q96IZ5 413 aaKnown RBP16.96■□□□□ 0.31
SCLT1-208ENST00000506368 EPAS1Q99814 870 aa16.96■□□□□ 0.31
SCLT1-208ENST00000506368 TRAIPQ9BWF2 469 aa16.96■□□□□ 0.31
SCLT1-208ENST00000506368 KIAA1683Q9H0B3 1180 aa16.96■□□□□ 0.31
SCLT1-208ENST00000506368 AAASQ9NRG9 546 aa16.96■□□□□ 0.31
SCLT1-208ENST00000506368 HAO1Q9UJM8 370 aa16.96■□□□□ 0.31
SCLT1-208ENST00000506368 AJAP1Q9UKB5 411 aaPredicted RBP16.96■□□□□ 0.31
SCLT1-208ENST00000506368 C2CD2LO14523 706 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 EIF3DO15371 548 aaKnown RBP eCLIP16.95■□□□□ 0.3
SCLT1-208ENST00000506368 THAP12O43422 761 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 SORBS3O60504 671 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 CCDC22O60826 627 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 ACSL3O95573 720 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 GM2AP17900 193 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 KCNA3P22001 575 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 RFC5P40937 340 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 PPP4CP60510 307 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 PTK6Q13882 451 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 MPP2Q14168 576 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 TBC1D25Q3MII6 688 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 MOXD1Q6UVY6 613 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 C4orf50Q6ZRC1 276 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 DNAAF5Q86Y56 855 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 DZIP1Q86YF9 867 aaKnown RBP16.95■□□□□ 0.3
SCLT1-208ENST00000506368 LARGE2Q8N3Y3 721 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 SYT2Q8N9I0 419 aaPredicted RBP16.95■□□□□ 0.3
SCLT1-208ENST00000506368 PTPRN2Q92932 1015 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 CD101Q93033 1021 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 BORCS6Q96GS4 357 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 DENND2DQ9H6A0 471 aaPredicted RBP16.95■□□□□ 0.3
SCLT1-208ENST00000506368 IL1RAPL1Q9NZN1 696 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 APEX2Q9UBZ4 518 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 ZNF212Q9UDV6 495 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 COG5Q9UP83 839 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 UBE4BO95155 1302 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 EDF1O60869 148 aaKnown RBP16.95■□□□□ 0.3
SCLT1-208ENST00000506368 GAS8O95995 478 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 BCRP11274 1271 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 GAP43P17677 238 aa16.95■□□□□ 0.3
SCLT1-208ENST00000506368 HIBADHP31937 336 aaKnown RBP16.95■□□□□ 0.3
SCLT1-208ENST00000506368 TUBP50607 506 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms