RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 ALKAL1Q6UXT8 129 aa19.55■□□□□ 0.72
SMN1-204ENST00000506163 ZPBP2Q6X784 338 aa19.55■□□□□ 0.72
SMN1-204ENST00000506163 RABGGTAQ92696 567 aa19.55■□□□□ 0.72
SMN1-204ENST00000506163 TMEM175Q9BSA9 504 aa19.55■□□□□ 0.72
SMN1-204ENST00000506163 TRIM9Q9C026 710 aa19.55■□□□□ 0.72
SMN1-204ENST00000506163 TNMDQ9H2S6 317 aa19.55■□□□□ 0.72
SMN1-204ENST00000506163 CUEDC2Q9H467 287 aa19.55■□□□□ 0.72
SMN1-204ENST00000506163 ST6GALNAC4Q9H4F1 302 aa19.55■□□□□ 0.72
SMN1-204ENST00000506163 TLR9Q9NR96 1032 aa19.55■□□□□ 0.72
SMN1-204ENST00000506163 MARCH5Q9NX47 278 aa19.55■□□□□ 0.72
SMN1-204ENST00000506163 ATP6V1DQ9Y5K8 247 aa19.55■□□□□ 0.72
SMN1-204ENST00000506163 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.54■□□□□ 0.72
SMN1-204ENST00000506163 TISP43B9A030 160 aa19.54■□□□□ 0.72
SMN1-204ENST00000506163 H0YCG3 227 aa19.54■□□□□ 0.72
SMN1-204ENST00000506163 PIGRP01833 764 aa19.54■□□□□ 0.72
SMN1-204ENST00000506163 MCF2P10911 925 aa19.54■□□□□ 0.72
SMN1-204ENST00000506163 HARSP12081 509 aaKnown RBP19.54■□□□□ 0.72
SMN1-204ENST00000506163 IDEP14735 1019 aa19.54■□□□□ 0.72
SMN1-204ENST00000506163 CASP5P51878 434 aa19.54■□□□□ 0.72
SMN1-204ENST00000506163 MCL1Q07820 350 aa19.54■□□□□ 0.72
SMN1-204ENST00000506163 PAAF1Q9BRP4 392 aa19.54■□□□□ 0.72
SMN1-204ENST00000506163 TCHPQ9BT92 498 aa19.54■□□□□ 0.72
SMN1-204ENST00000506163 PANK4Q9NVE7 773 aa19.54■□□□□ 0.72
SMN1-204ENST00000506163 FAM13BQ9NYF5 915 aa19.54■□□□□ 0.72
SMN1-204ENST00000506163 ANKFY1Q9P2R3 1169 aa19.54■□□□□ 0.72
SMN1-204ENST00000506163 HPSEQ9Y251 543 aa19.54■□□□□ 0.72
SMN1-204ENST00000506163 FAN1Q9Y2M0 1017 aa19.54■□□□□ 0.72
SMN1-204ENST00000506163 VCANP13611 3396 aa19.54■□□□□ 0.72
SMN1-204ENST00000506163 ZMYM2Q9UBW7 1377 aa19.54■□□□□ 0.72
SMN1-204ENST00000506163 ANKRD63C9JTQ0 380 aa19.53■□□□□ 0.72
SMN1-204ENST00000506163 ALDH2P05091 517 aa19.53■□□□□ 0.72
SMN1-204ENST00000506163 PFKFB1P16118 471 aa19.53■□□□□ 0.72
SMN1-204ENST00000506163 IGFBP6P24592 240 aaPredicted RBP19.53■□□□□ 0.72
SMN1-204ENST00000506163 KRT17Q04695 432 aa19.53■□□□□ 0.72
SMN1-204ENST00000506163 XKR4Q5GH76 650 aa19.53■□□□□ 0.72
SMN1-204ENST00000506163 HERC4Q5GLZ8 1057 aaPredicted RBP19.53■□□□□ 0.72
SMN1-204ENST00000506163 ZBTB41Q5SVQ8 909 aa19.53■□□□□ 0.72
SMN1-204ENST00000506163 MAP4K3Q8IVH8 894 aa19.53■□□□□ 0.72
SMN1-204ENST00000506163 GRAMD1CQ8IYS0 662 aa19.53■□□□□ 0.72
SMN1-204ENST00000506163 GLIS3Q8NEA6 775 aa19.53■□□□□ 0.72
SMN1-204ENST00000506163 HPS3Q969F9 1004 aa19.53■□□□□ 0.72
SMN1-204ENST00000506163 FAM193BQ96PV7 902 aaPredicted RBP19.53■□□□□ 0.72
SMN1-204ENST00000506163 C7orf25Q9BPX7 421 aa19.53■□□□□ 0.72
SMN1-204ENST00000506163 SCAND2PQ9GZW5 306 aaPredicted RBP19.53■□□□□ 0.72
SMN1-204ENST00000506163 SERTAD1Q9UHV2 236 aa19.53■□□□□ 0.72
SMN1-204ENST00000506163 PRG3Q9Y2Y8 225 aaPredicted RBP19.53■□□□□ 0.72
SMN1-204ENST00000506163 FAM237AA0A1B0GTK4 181 aa19.52■□□□□ 0.72
SMN1-204ENST00000506163 HIDE1A8MVS5 230 aa19.52■□□□□ 0.72
SMN1-204ENST00000506163 PER2O15055 1255 aa19.52■□□□□ 0.72
SMN1-204ENST00000506163 LINC01565O15544 149 aa19.52■□□□□ 0.72
SMN1-204ENST00000506163 ACTN4O43707 911 aaKnown RBP19.52■□□□□ 0.72
SMN1-204ENST00000506163 FAM189A1O60320 539 aa19.52■□□□□ 0.72
SMN1-204ENST00000506163 EFEMP2O95967 443 aa19.52■□□□□ 0.72
SMN1-204ENST00000506163 GAP43P17677 238 aa19.52■□□□□ 0.72
SMN1-204ENST00000506163 LTBRP36941 435 aa19.52■□□□□ 0.72
SMN1-204ENST00000506163 OR1G1P47890 313 aa19.52■□□□□ 0.72
SMN1-204ENST00000506163 GRIK3Q13003 919 aa19.52■□□□□ 0.72
SMN1-204ENST00000506163 NOLC1Q14978 699 aaKnown RBP eCLIP19.52■□□□□ 0.72
SMN1-204ENST00000506163 CTC1Q2NKJ3 1217 aa19.52■□□□□ 0.72
SMN1-204ENST00000506163 TPRNQ4KMQ1 711 aa19.52■□□□□ 0.72
SMN1-204ENST00000506163 GLRA4Q5JXX5 417 aa19.52■□□□□ 0.72
SMN1-204ENST00000506163 PLPP4Q5VZY2 271 aa19.52■□□□□ 0.72
SMN1-204ENST00000506163 CNNM4Q6P4Q7 775 aa19.52■□□□□ 0.72
SMN1-204ENST00000506163 TAS1R1Q7RTX1 841 aa19.52■□□□□ 0.72
SMN1-204ENST00000506163 DDX53Q86TM3 631 aaKnown RBP19.52■□□□□ 0.72
SMN1-204ENST00000506163 RBM23Q86U06 439 aaKnown RBP19.52■□□□□ 0.72
SMN1-204ENST00000506163 MICAL1Q8TDZ2 1067 aa19.52■□□□□ 0.72
SMN1-204ENST00000506163 ZMAT2Q96NC0 199 aaKnown RBP19.52■□□□□ 0.72
SMN1-204ENST00000506163 TCF25Q9BQ70 676 aa19.52■□□□□ 0.72
SMN1-204ENST00000506163 BLZF1Q9H2G9 400 aa19.52■□□□□ 0.72
SMN1-204ENST00000506163 GOLPH3LQ9H4A5 285 aa19.52■□□□□ 0.72
SMN1-204ENST00000506163 MRPL44Q9H9J2 332 aaKnown RBP19.52■□□□□ 0.72
SMN1-204ENST00000506163 THEGQ9P2T0 379 aa19.52■□□□□ 0.72
SMN1-204ENST00000506163 SEL1LQ9UBV2 794 aa19.52■□□□□ 0.72
SMN1-204ENST00000506163 PUF60Q9UHX1 559 aaKnown RBP19.52■□□□□ 0.72
SMN1-204ENST00000506163 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.51■□□□□ 0.71
SMN1-204ENST00000506163 CLDN3O15551 220 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 MYBP10242 640 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 AFMP43652 599 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 DLX2Q07687 328 aaPredicted RBP19.51■□□□□ 0.71
SMN1-204ENST00000506163 COASYQ13057 564 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 SLC10A6Q3KNW5 377 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 VPS52Q8N1B4 723 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 AUTS2Q8WXX7 1259 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 HLA-CQ95604 372 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 BICD1Q96G01 975 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 TMEM169Q96HH4 297 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 PPP1R10Q96QC0 940 aaKnown RBP19.51■□□□□ 0.71
SMN1-204ENST00000506163 RPS6KC1Q96S38 1066 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 ZBP1Q9H171 429 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 IGFLR1Q9H665 355 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 OLFML3Q9NRN5 406 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 A0A0B4J269 797 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 SMIM28A0A1B0GU29 152 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 HNRNPDLO14979 420 aaKnown RBP19.51■□□□□ 0.71
SMN1-204ENST00000506163 THP07101 528 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 SLFN14P0C7P3 912 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 SCP2P22307 547 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 TNFSF9P41273 254 aa19.51■□□□□ 0.71
SMN1-204ENST00000506163 NRIP1P48552 1158 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms