RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 PDCD7Q8N8D1 485 aaKnown RBP3.87□□□□□ -1.79
TCOF1-208ENST00000506063 RNF169Q8NCN4 708 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 SNRNP27Q8WVK2 155 aaKnown RBP3.87□□□□□ -1.79
TCOF1-208ENST00000506063 PIGKQ92643 395 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 MSANTD3Q96H12 275 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 DDRGK1Q96HY6 314 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 ZSWIM3Q96MP5 696 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 PPP1R16BQ96T49 567 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 TMEM47Q9BQJ4 181 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 TRAIPQ9BWF2 469 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 AVENQ9NQS1 362 aaPredicted RBP3.87□□□□□ -1.79
TCOF1-208ENST00000506063 FNIP2Q9P278 1114 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 PILRBQ9UKJ0 227 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 INVSQ9Y283 1065 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 PCDHA1Q9Y5I3 950 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 SALL3Q9BXA9 1300 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 ZNF638Q14966 1978 aaKnown RBP3.86□□□□□ -1.79
TCOF1-208ENST00000506063 TRIP11Q15643 1979 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 WDR27A2RRH5 827 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 CARNS1A5YM72 827 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 E9PAM4 449 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 TNFRSF10BO14763 440 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 ADAM12O43184 909 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 FIBPO43427 364 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 SUV39H1O43463 412 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 OPHN1O60890 802 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 SURF6O75683 361 aaKnown RBP3.86□□□□□ -1.79
TCOF1-208ENST00000506063 RHOP08100 348 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 GNAI3P08754 354 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 ATXN1LP0C7T5 689 aaKnown RBP3.86□□□□□ -1.79
TCOF1-208ENST00000506063 GOLGA8HP0CJ92 632 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 ELAVL4P26378 380 aaKnown RBP3.86□□□□□ -1.79
TCOF1-208ENST00000506063 KLRC1P26715 233 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 CCND2P30279 289 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 VIPR2P41587 438 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 CCR2P41597 374 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 PTGER3P43115 390 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 PHKA2P46019 1235 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 NFKB2Q00653 900 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 PABPC1LQ4VXU2 614 aaKnown RBP3.86□□□□□ -1.79
TCOF1-208ENST00000506063 ODR4Q5SWX8 454 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 FSTL4Q6MZW2 842 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 C1orf228Q6PIY5 440 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 ELMSAN1Q6PJG2 1045 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 AACSQ86V21 672 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 ERICH1Q86X53 443 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 TICAM1Q8IUC6 712 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 GLYCTKQ8IVS8 523 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 NAXDQ8IW45 347 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 GPR65Q8IYL9 337 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 LINC01465Q8N7H1 131 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 SEPT1Q8WYJ6 367 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 RSPH1Q8WYR4 309 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 EZH1Q92800 747 aaPredicted RBP3.86□□□□□ -1.79
TCOF1-208ENST00000506063 OSBP2Q969R2 916 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 TCEAL4Q96EI5 215 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 LRRC3BQ96PB8 259 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 FNBP1Q96RU3 617 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 DNAJC2Q99543 621 aaKnown RBP3.86□□□□□ -1.79
TCOF1-208ENST00000506063 TMEM175Q9BSA9 504 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 PI4K2AQ9BTU6 479 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 NUSAP1Q9BXS6 441 aaKnown RBP3.86□□□□□ -1.79
TCOF1-208ENST00000506063 GPR62Q9BZJ7 368 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 UBA5Q9GZZ9 404 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 SMARCAD1Q9H4L7 1026 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 TRPV4Q9HBA0 871 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 ZFP14Q9HCL3 533 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 PAG1Q9NWQ8 432 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 STK39Q9UEW8 545 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 PCOLCE2Q9UKZ9 415 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 APOBEC2Q9Y235 224 aaKnown RBP3.86□□□□□ -1.79
TCOF1-208ENST00000506063 SSUH2Q9Y2M2 353 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 APCP25054 2843 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 ATXN2Q99700 1313 aaKnown RBP3.86□□□□□ -1.79
TCOF1-208ENST00000506063 ANKHD1Q8IWZ3 2542 aaKnown RBP3.86□□□□□ -1.79
TCOF1-208ENST00000506063 ANK1P16157 1881 aa3.86□□□□□ -1.79
TCOF1-208ENST00000506063 LRRK1Q38SD2 2015 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 BLACEA4D250 179 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 PLK4O00444 970 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 ZNF623O75123 536 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 BCAR3O75815 825 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 C22orf31O95567 290 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 VTNP04004 478 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 FGRP09769 529 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 TOP1P11387 765 aaKnown RBP3.85□□□□□ -1.79
TCOF1-208ENST00000506063 ITGB6P18564 788 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 FGFR4P22455 802 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 EIF4BP23588 611 aaKnown RBP3.85□□□□□ -1.79
TCOF1-208ENST00000506063 GRNP28799 593 aaKnown RBP3.85□□□□□ -1.79
TCOF1-208ENST00000506063 TNFRSF8P28908 595 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 GBP1P32455 592 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 DHPSP49366 369 aaPredicted RBP3.85□□□□□ -1.79
TCOF1-208ENST00000506063 PPARAQ07869 468 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 DSC1Q08554 894 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 FCHO2Q0JRZ9 810 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 KCNH2Q12809 1159 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 MYO1EQ12965 1108 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 NFATC3Q12968 1075 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 SLC14A1Q13336 389 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 GRM4Q14833 912 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms