RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 ADCY6O43306 1168 aa7.41□□□□□ -1.22
NIPBL-205ENST00000505998 STC2O76061 302 aa7.41□□□□□ -1.22
NIPBL-205ENST00000505998 ZRANB2O95218 330 aaKnown RBP eCLIP7.41□□□□□ -1.22
NIPBL-205ENST00000505998 PTPN7P35236 360 aa7.41□□□□□ -1.22
NIPBL-205ENST00000505998 WASP42768 502 aa7.41□□□□□ -1.22
NIPBL-205ENST00000505998 MRPL49Q13405 166 aaKnown RBP7.41□□□□□ -1.22
NIPBL-205ENST00000505998 SEPT2Q15019 361 aa7.41□□□□□ -1.22
NIPBL-205ENST00000505998 MIGA2Q7L4E1 593 aa7.41□□□□□ -1.22
NIPBL-205ENST00000505998 TTC9BQ8N6N2 239 aa7.41□□□□□ -1.22
NIPBL-205ENST00000505998 OR2I1PQ8NGU4 316 aa7.41□□□□□ -1.22
NIPBL-205ENST00000505998 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.41□□□□□ -1.22
NIPBL-205ENST00000505998 MDM1Q8TC05 714 aa7.41□□□□□ -1.22
NIPBL-205ENST00000505998 HOXB13Q92826 284 aaPredicted RBP7.41□□□□□ -1.22
NIPBL-205ENST00000505998 COA7Q96BR5 231 aa7.41□□□□□ -1.22
NIPBL-205ENST00000505998 HSPBAP1Q96EW2 488 aa7.41□□□□□ -1.22
NIPBL-205ENST00000505998 TCF7L1Q9HCS4 588 aa7.41□□□□□ -1.22
NIPBL-205ENST00000505998 SMPD4Q9NXE4 827 aa7.41□□□□□ -1.22
NIPBL-205ENST00000505998 G3BP2Q9UN86 482 aaKnown RBP7.41□□□□□ -1.22
NIPBL-205ENST00000505998 TCAF1Q9Y4C2 921 aa7.41□□□□□ -1.22
NIPBL-205ENST00000505998 HOXA3O43365 443 aaPredicted RBP7.4□□□□□ -1.22
NIPBL-205ENST00000505998 ABLIM3O94929 683 aa7.4□□□□□ -1.22
NIPBL-205ENST00000505998 FAM214AQ32MH5 1076 aa7.4□□□□□ -1.22
NIPBL-205ENST00000505998 SGMS1Q86VZ5 419 aa7.4□□□□□ -1.22
NIPBL-205ENST00000505998 REPS2Q8NFH8 660 aa7.4□□□□□ -1.22
NIPBL-205ENST00000505998 HDAC10Q969S8 669 aa7.4□□□□□ -1.22
NIPBL-205ENST00000505998 FAM89AQ96GI7 184 aa7.4□□□□□ -1.22
NIPBL-205ENST00000505998 SENP6Q9GZR1 1112 aaPredicted RBP7.4□□□□□ -1.22
NIPBL-205ENST00000505998 MANSC1Q9H8J5 431 aa7.4□□□□□ -1.22
NIPBL-205ENST00000505998 CD248Q9HCU0 757 aa7.4□□□□□ -1.22
NIPBL-205ENST00000505998 ZNF180Q9UJW8 692 aa7.4□□□□□ -1.22
NIPBL-205ENST00000505998 ANKRD6Q9Y2G4 727 aa7.4□□□□□ -1.22
NIPBL-205ENST00000505998 ARHGAP35Q9NRY4 1499 aa7.4□□□□□ -1.22
NIPBL-205ENST00000505998 ZMYM3Q14202 1370 aa7.39□□□□□ -1.23
NIPBL-205ENST00000505998 CCDC154A6NI56 674 aa7.39□□□□□ -1.23
NIPBL-205ENST00000505998 HTRA2O43464 458 aaPredicted RBP7.39□□□□□ -1.23
NIPBL-205ENST00000505998 MFAP3LO75121 409 aa7.39□□□□□ -1.23
NIPBL-205ENST00000505998 PF4V1P10720 104 aa7.39□□□□□ -1.23
NIPBL-205ENST00000505998 ZSCAN20P17040 1043 aaPredicted RBP7.39□□□□□ -1.23
NIPBL-205ENST00000505998 GNAT2P19087 354 aa7.39□□□□□ -1.23
NIPBL-205ENST00000505998 VCAM1P19320 739 aa7.39□□□□□ -1.23
NIPBL-205ENST00000505998 ACO1P21399 889 aaKnown RBP7.39□□□□□ -1.23
NIPBL-205ENST00000505998 SREBF1P36956 1147 aa7.39□□□□□ -1.23
NIPBL-205ENST00000505998 ELAVL1Q15717 326 aaKnown RBP7.39□□□□□ -1.23
NIPBL-205ENST00000505998 PRAMEF14Q5SWL7 426 aa7.39□□□□□ -1.23
NIPBL-205ENST00000505998 ZNF585AQ6P3V2 769 aa7.39□□□□□ -1.23
NIPBL-205ENST00000505998 RHOT1Q8IXI2 618 aa7.39□□□□□ -1.23
NIPBL-205ENST00000505998 TRMT2AQ8IZ69 625 aaKnown RBP7.39□□□□□ -1.23
NIPBL-205ENST00000505998 BORCS6Q96GS4 357 aa7.39□□□□□ -1.23
NIPBL-205ENST00000505998 C8orf49Q96NF6 230 aa7.39□□□□□ -1.23
NIPBL-205ENST00000505998 LANCL2Q9NS86 450 aa7.39□□□□□ -1.23
NIPBL-205ENST00000505998 TCEAL9Q9UHQ7 104 aa7.39□□□□□ -1.23
NIPBL-205ENST00000505998 SERPINB13Q9UIV8 391 aa7.39□□□□□ -1.23
NIPBL-205ENST00000505998 LIMCH1Q9UPQ0 1083 aa7.39□□□□□ -1.23
NIPBL-205ENST00000505998 ABCA8O94911 1581 aa7.38□□□□□ -1.23
NIPBL-205ENST00000505998 CAPN14A8MX76 684 aa7.38□□□□□ -1.23
NIPBL-205ENST00000505998 IPO13O94829 963 aaKnown RBP7.38□□□□□ -1.23
NIPBL-205ENST00000505998 SELENOPP49908 381 aa7.38□□□□□ -1.23
NIPBL-205ENST00000505998 APBB1IPQ7Z5R6 666 aaPredicted RBP7.38□□□□□ -1.23
NIPBL-205ENST00000505998 RAVER1Q8IY67 606 aaKnown RBP7.38□□□□□ -1.23
NIPBL-205ENST00000505998 ANKRD35Q8N283 1001 aa7.38□□□□□ -1.23
NIPBL-205ENST00000505998 ZNF808Q8N4W9 903 aaPredicted RBP7.38□□□□□ -1.23
NIPBL-205ENST00000505998 FBXO18Q8NFZ0 1043 aa7.38□□□□□ -1.23
NIPBL-205ENST00000505998 CCHCR1Q8TD31 782 aa7.38□□□□□ -1.23
NIPBL-205ENST00000505998 JPH3Q8WXH2 748 aaPredicted RBP7.38□□□□□ -1.23
NIPBL-205ENST00000505998 CYFIP2Q96F07 1278 aa7.38□□□□□ -1.23
NIPBL-205ENST00000505998 WWC2-AS2Q96NR7 200 aa7.38□□□□□ -1.23
NIPBL-205ENST00000505998 PDCD2LQ9BRP1 358 aa7.38□□□□□ -1.23
NIPBL-205ENST00000505998 RHOBTB2Q9BYZ6 727 aa7.38□□□□□ -1.23
NIPBL-205ENST00000505998 LDAHQ9H6V9 325 aa7.38□□□□□ -1.23
NIPBL-205ENST00000505998 METTL14Q9HCE5 456 aaKnown RBP7.38□□□□□ -1.23
NIPBL-205ENST00000505998 ZIM2Q9NZV7 527 aa7.38□□□□□ -1.23
NIPBL-205ENST00000505998 HDAC5Q9UQL6 1122 aa7.38□□□□□ -1.23
NIPBL-205ENST00000505998 SIK3Q9Y2K2 1263 aa7.38□□□□□ -1.23
NIPBL-205ENST00000505998 IPPQ9Y573 584 aa7.38□□□□□ -1.23
NIPBL-205ENST00000505998 EID1Q9Y6B2 187 aa7.38□□□□□ -1.23
NIPBL-205ENST00000505998 ARAP1Q96P48 1450 aa7.37□□□□□ -1.23
NIPBL-205ENST00000505998 MAGEA10P43363 369 aaPredicted RBP7.37□□□□□ -1.23
NIPBL-205ENST00000505998 SLC6A9P48067 706 aa7.37□□□□□ -1.23
NIPBL-205ENST00000505998 FLT3LGP49771 235 aa7.37□□□□□ -1.23
NIPBL-205ENST00000505998 MAMDC4Q6UXC1 1216 aa7.37□□□□□ -1.23
NIPBL-205ENST00000505998 Q6ZSN1 163 aa7.37□□□□□ -1.23
NIPBL-205ENST00000505998 FAM83AQ86UY5 434 aa7.37□□□□□ -1.23
NIPBL-205ENST00000505998 ELOA2Q8IYF1 753 aaPredicted RBP7.37□□□□□ -1.23
NIPBL-205ENST00000505998 ST8SIA2Q92186 375 aa7.37□□□□□ -1.23
NIPBL-205ENST00000505998 MIEF2Q96C03 454 aa7.37□□□□□ -1.23
NIPBL-205ENST00000505998 CAMKK2Q96RR4 588 aa7.37□□□□□ -1.23
NIPBL-205ENST00000505998 ADOQ96SZ5 270 aa7.37□□□□□ -1.23
NIPBL-205ENST00000505998 NUP88Q99567 741 aaPredicted RBP7.37□□□□□ -1.23
NIPBL-205ENST00000505998 RTFDC1Q9BY42 306 aaPredicted RBP7.37□□□□□ -1.23
NIPBL-205ENST00000505998 KLC2Q9H0B6 622 aa7.37□□□□□ -1.23
NIPBL-205ENST00000505998 CDH19Q9H159 772 aa7.37□□□□□ -1.23
NIPBL-205ENST00000505998 TMEM140Q9NV12 185 aa7.37□□□□□ -1.23
NIPBL-205ENST00000505998 HECAQ9UBI9 543 aaPredicted RBP7.37□□□□□ -1.23
NIPBL-205ENST00000505998 AJAP1Q9UKB5 411 aaPredicted RBP7.37□□□□□ -1.23
NIPBL-205ENST00000505998 JAG2Q9Y219 1238 aa7.37□□□□□ -1.23
NIPBL-205ENST00000505998 PCDHA13Q9Y5I0 950 aa7.37□□□□□ -1.23
NIPBL-205ENST00000505998 LRRIQ1Q96JM4 1722 aa7.37□□□□□ -1.23
NIPBL-205ENST00000505998 UHRF1BP1LA0JNW5 1464 aa7.36□□□□□ -1.23
NIPBL-205ENST00000505998 PRG4Q92954 1404 aaPredicted RBP7.36□□□□□ -1.23
NIPBL-205ENST00000505998 CYP27B1O15528 508 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms