RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 RIN2Q8WYP3 895 aaPredicted RBP27.25■■□□□ 1.95
HERC4-212ENST00000505760 IFT74Q96LB3 600 aa27.25■■□□□ 1.95
HERC4-212ENST00000505760 PHOX2BQ99453 314 aa27.25■■□□□ 1.95
HERC4-212ENST00000505760 MFSD1Q9H3U5 465 aa27.25■■□□□ 1.95
HERC4-212ENST00000505760 SNTG2Q9NY99 539 aa27.25■■□□□ 1.95
HERC4-212ENST00000505760 CACNG4Q9UBN1 327 aa27.25■■□□□ 1.95
HERC4-212ENST00000505760 LRWD1Q9UFC0 647 aa27.25■■□□□ 1.95
HERC4-212ENST00000505760 SF3B1O75533 1304 aaKnown RBP eCLIP27.24■■□□□ 1.95
HERC4-212ENST00000505760 ACKR2O00590 384 aa27.24■■□□□ 1.95
HERC4-212ENST00000505760 FXR2P51116 673 aaKnown RBP eCLIP27.24■■□□□ 1.95
HERC4-212ENST00000505760 CREMQ03060 361 aa27.24■■□□□ 1.95
HERC4-212ENST00000505760 GLYCTKQ8IVS8 523 aa27.24■■□□□ 1.95
HERC4-212ENST00000505760 GPR65Q8IYL9 337 aa27.24■■□□□ 1.95
HERC4-212ENST00000505760 HDAC7Q8WUI4 952 aa27.24■■□□□ 1.95
HERC4-212ENST00000505760 STAMQ92783 540 aa27.24■■□□□ 1.95
HERC4-212ENST00000505760 CCDC113Q9H0I3 377 aa27.24■■□□□ 1.95
HERC4-212ENST00000505760 IRF2BPLQ9H1B7 796 aa27.24■■□□□ 1.95
HERC4-212ENST00000505760 BHMT2Q9H2M3 363 aa27.24■■□□□ 1.95
HERC4-212ENST00000505760 PLEKHA4Q9H4M7 779 aa27.24■■□□□ 1.95
HERC4-212ENST00000505760 FNIP2Q9P278 1114 aa27.24■■□□□ 1.95
HERC4-212ENST00000505760 CACNA1HO95180 2353 aa27.24■■□□□ 1.95
HERC4-212ENST00000505760 USP34Q70CQ2 3546 aa27.23■■□□□ 1.95
HERC4-212ENST00000505760 CASTOR2A6NHX0 329 aa27.23■■□□□ 1.95
HERC4-212ENST00000505760 RFPL2O75678 378 aa27.23■■□□□ 1.95
HERC4-212ENST00000505760 RECQL4O94761 1208 aa27.23■■□□□ 1.95
HERC4-212ENST00000505760 THP07101 528 aa27.23■■□□□ 1.95
HERC4-212ENST00000505760 NUBP1P53384 320 aa27.23■■□□□ 1.95
HERC4-212ENST00000505760 TDGQ13569 410 aa27.23■■□□□ 1.95
HERC4-212ENST00000505760 NBR1Q14596 966 aa27.23■■□□□ 1.95
HERC4-212ENST00000505760 SMG7Q92540 1137 aaKnown RBP27.23■■□□□ 1.95
HERC4-212ENST00000505760 PAAF1Q9BRP4 392 aa27.23■■□□□ 1.95
HERC4-212ENST00000505760 WDR6Q9NNW5 1121 aaKnown RBP27.23■■□□□ 1.95
HERC4-212ENST00000505760 KIAA1024Q9UPX6 916 aa27.23■■□□□ 1.95
HERC4-212ENST00000505760 USP20Q9Y2K6 914 aa27.23■■□□□ 1.95
HERC4-212ENST00000505760 TGM5O43548 720 aa27.22■■□□□ 1.95
HERC4-212ENST00000505760 C1RP00736 705 aa27.22■■□□□ 1.95
HERC4-212ENST00000505760 GBP2P32456 591 aaPredicted RBP27.22■■□□□ 1.95
HERC4-212ENST00000505760 EFNA5P52803 228 aa27.22■■□□□ 1.95
HERC4-212ENST00000505760 C4orf32Q8N8J7 132 aa27.22■■□□□ 1.95
HERC4-212ENST00000505760 HASPINQ8TF76 798 aa27.22■■□□□ 1.95
HERC4-212ENST00000505760 KIFAP3Q92845 792 aa27.22■■□□□ 1.95
HERC4-212ENST00000505760 RHOBTB2Q9BYZ6 727 aa27.22■■□□□ 1.95
HERC4-212ENST00000505760 RAB34Q9BZG1 259 aa27.22■■□□□ 1.95
HERC4-212ENST00000505760 KCNK12Q9HB15 430 aa27.22■■□□□ 1.95
HERC4-212ENST00000505760 PIDD1Q9HB75 910 aa27.22■■□□□ 1.95
HERC4-212ENST00000505760 POLD4Q9HCU8 107 aa27.22■■□□□ 1.95
HERC4-212ENST00000505760 CLUHO75153 1309 aa27.21■■□□□ 1.95
HERC4-212ENST00000505760 PTGESO14684 152 aa27.21■■□□□ 1.95
HERC4-212ENST00000505760 RPL17P18621 184 aaKnown RBP27.21■■□□□ 1.95
HERC4-212ENST00000505760 ECM1Q16610 540 aa27.21■■□□□ 1.95
HERC4-212ENST00000505760 KIFC3Q9BVG8 833 aa27.21■■□□□ 1.95
HERC4-212ENST00000505760 DDX19AQ9NUU7 478 aaKnown RBP27.21■■□□□ 1.95
HERC4-212ENST00000505760 GDAQ9Y2T3 454 aa27.21■■□□□ 1.95
HERC4-212ENST00000505760 STK24Q9Y6E0 443 aa27.21■■□□□ 1.95
HERC4-212ENST00000505760 U2AF2P26368 475 aaKnown RBP eCLIP27.2■■□□□ 1.943e-11■■■□□ 16.4
HERC4-212ENST00000505760 PTGDRQ13258 359 aa27.2■■□□□ 1.94
HERC4-212ENST00000505760 PDIA5Q14554 519 aa27.2■■□□□ 1.94
HERC4-212ENST00000505760 DCAF4L1Q3SXM0 396 aa27.2■■□□□ 1.94
HERC4-212ENST00000505760 RTP2Q5QGT7 225 aa27.2■■□□□ 1.94
HERC4-212ENST00000505760 ASTLQ6HA08 431 aaPredicted RBP27.2■■□□□ 1.94
HERC4-212ENST00000505760 PRSS55Q6UWB4 352 aaPredicted RBP27.2■■□□□ 1.94
HERC4-212ENST00000505760 SNX29Q8TEQ0 813 aa27.2■■□□□ 1.94
HERC4-212ENST00000505760 ATOH1Q92858 354 aaPredicted RBP27.2■■□□□ 1.94
HERC4-212ENST00000505760 KIF2CQ99661 725 aa27.2■■□□□ 1.94
HERC4-212ENST00000505760 TTPALQ9BTX7 342 aa27.2■■□□□ 1.94
HERC4-212ENST00000505760 FAM86C1Q9NVL1 165 aa27.2■■□□□ 1.94
HERC4-212ENST00000505760 ZDHHC7Q9NXF8 308 aa27.2■■□□□ 1.94
HERC4-212ENST00000505760 IGSF9Q9P2J2 1179 aa27.2■■□□□ 1.94
HERC4-212ENST00000505760 N4BP1O75113 896 aaKnown RBP27.19■■□□□ 1.94
HERC4-212ENST00000505760 KIF4AO95239 1232 aa27.19■■□□□ 1.94
HERC4-212ENST00000505760 EDN1P05305 212 aa27.19■■□□□ 1.94
HERC4-212ENST00000505760 FAM171A1Q5VUB5 890 aa27.19■■□□□ 1.94
HERC4-212ENST00000505760 EEF1DP3Q658K8 133 aa27.19■■□□□ 1.94
HERC4-212ENST00000505760 CEP57Q86XR8 500 aa27.19■■□□□ 1.94
HERC4-212ENST00000505760 TMEM105Q8N8V8 129 aa27.19■■□□□ 1.94
HERC4-212ENST00000505760 ZNF707Q96C28 371 aaPredicted RBP27.19■■□□□ 1.94
HERC4-212ENST00000505760 NT5C3AQ9H0P0 336 aa27.19■■□□□ 1.94
HERC4-212ENST00000505760 DUSP12Q9UNI6 340 aa27.19■■□□□ 1.94
HERC4-212ENST00000505760 GALR2O43603 387 aaPredicted RBP27.18■■□□□ 1.94
HERC4-212ENST00000505760 ATF7IP2Q5U623 682 aa27.18■■□□□ 1.94
HERC4-212ENST00000505760 LILRA6Q6PI73 481 aa27.18■■□□□ 1.94
HERC4-212ENST00000505760 APBB1IPQ7Z5R6 666 aaPredicted RBP27.18■■□□□ 1.94
HERC4-212ENST00000505760 IGSF22Q8N9C0 903 aa27.18■■□□□ 1.94
HERC4-212ENST00000505760 CXCL16Q9H2A7 254 aa27.18■■□□□ 1.94
HERC4-212ENST00000505760 DAXXQ9UER7 740 aaPredicted RBP27.18■■□□□ 1.94
HERC4-212ENST00000505760 FBXL21Q9UKT6 434 aa27.18■■□□□ 1.94
HERC4-212ENST00000505760 PCDHB6Q9Y5E3 794 aa27.18■■□□□ 1.94
HERC4-212ENST00000505760 TRIP11Q15643 1979 aa27.18■■□□□ 1.94
HERC4-212ENST00000505760 H0Y858 1186 aa27.17■■□□□ 1.94
HERC4-212ENST00000505760 K7ERI5 159 aa27.17■■□□□ 1.94
HERC4-212ENST00000505760 TOB1P50616 345 aaPredicted RBP27.17■■□□□ 1.94
HERC4-212ENST00000505760 ELAVL2Q12926 359 aaKnown RBP27.17■■□□□ 1.94
HERC4-212ENST00000505760 FLCNQ8NFG4 579 aa27.17■■□□□ 1.94
HERC4-212ENST00000505760 PRKD2Q9BZL6 878 aa27.17■■□□□ 1.94
HERC4-212ENST00000505760 DNM3Q9UQ16 869 aa27.17■■□□□ 1.94
HERC4-212ENST00000505760 DOCK8Q8NF50 2099 aa27.17■■□□□ 1.94
HERC4-212ENST00000505760 CCDC169A6NNP5 214 aa27.16■■□□□ 1.94
HERC4-212ENST00000505760 CLCN5P51795 746 aa27.16■■□□□ 1.94
HERC4-212ENST00000505760 NAB2Q15742 525 aa27.16■■□□□ 1.94
HERC4-212ENST00000505760 PSMD5Q16401 504 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms