RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 LAD1O00515 517 aa13.3□□□□□ -0.28
PDLIM7-214ENST00000505746 PTGDRQ13258 359 aa13.3□□□□□ -0.28
PDLIM7-214ENST00000505746 APBB1IPQ7Z5R6 666 aaPredicted RBP13.3□□□□□ -0.28
PDLIM7-214ENST00000505746 PALB2Q86YC2 1186 aa13.3□□□□□ -0.28
PDLIM7-214ENST00000505746 RIN2Q8WYP3 895 aaPredicted RBP13.3□□□□□ -0.28
PDLIM7-214ENST00000505746 STAMQ92783 540 aa13.3□□□□□ -0.28
PDLIM7-214ENST00000505746 CCDC113Q9H0I3 377 aa13.3□□□□□ -0.28
PDLIM7-214ENST00000505746 BHMT2Q9H2M3 363 aa13.3□□□□□ -0.28
PDLIM7-214ENST00000505746 SNTG2Q9NY99 539 aa13.3□□□□□ -0.28
PDLIM7-214ENST00000505746 DNM3Q9UQ16 869 aa13.3□□□□□ -0.28
PDLIM7-214ENST00000505746 SF3B1O75533 1304 aaKnown RBP eCLIP13.3□□□□□ -0.288e-10■■■■■ 31
PDLIM7-214ENST00000505746 TTLL13PA6NNM8 815 aa13.29□□□□□ -0.28
PDLIM7-214ENST00000505746 TGM5O43548 720 aa13.29□□□□□ -0.28
PDLIM7-214ENST00000505746 RECQL4O94761 1208 aa13.29□□□□□ -0.28
PDLIM7-214ENST00000505746 VCPP55072 806 aaKnown RBP13.29□□□□□ -0.28
PDLIM7-214ENST00000505746 ELAVL2Q12926 359 aaKnown RBP13.29□□□□□ -0.28
PDLIM7-214ENST00000505746 TDGQ13569 410 aa13.29□□□□□ -0.28
PDLIM7-214ENST00000505746 NBR1Q14596 966 aa13.29□□□□□ -0.28
PDLIM7-214ENST00000505746 ECM1Q16610 540 aa13.29□□□□□ -0.28
PDLIM7-214ENST00000505746 DCAF4L1Q3SXM0 396 aa13.29□□□□□ -0.28
PDLIM7-214ENST00000505746 KRT79Q5XKE5 535 aa13.29□□□□□ -0.28
PDLIM7-214ENST00000505746 IGSF22Q8N9C0 903 aa13.29□□□□□ -0.28
PDLIM7-214ENST00000505746 FEZF2Q8TBJ5 459 aa13.29□□□□□ -0.28
PDLIM7-214ENST00000505746 SNX29Q8TEQ0 813 aa13.29□□□□□ -0.28
PDLIM7-214ENST00000505746 RABGGTAQ92696 567 aa13.29□□□□□ -0.28
PDLIM7-214ENST00000505746 B3GALT6Q96L58 329 aa13.29□□□□□ -0.28
PDLIM7-214ENST00000505746 MFSD1Q9H3U5 465 aa13.29□□□□□ -0.28
PDLIM7-214ENST00000505746 PIDD1Q9HB75 910 aa13.29□□□□□ -0.28
PDLIM7-214ENST00000505746 WDR6Q9NNW5 1121 aaKnown RBP13.29□□□□□ -0.28
PDLIM7-214ENST00000505746 DDX19AQ9NUU7 478 aaKnown RBP13.29□□□□□ -0.28
PDLIM7-214ENST00000505746 ZDHHC7Q9NXF8 308 aa13.29□□□□□ -0.28
PDLIM7-214ENST00000505746 IGSF9Q9P2J2 1179 aa13.29□□□□□ -0.28
PDLIM7-214ENST00000505746 TECTAO75443 2155 aa13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 CASTOR2A6NHX0 329 aa13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 K7ERI5 159 aa13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 PTGESO14684 152 aa13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 PDGFBP01127 241 aaPredicted RBP13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 SPATA31D3P0C874 917 aa13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 MYBP10242 640 aa13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 PRPHP41219 470 aa13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 TOB1P50616 345 aaPredicted RBP13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 TCF15Q12870 199 aa13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 RABEP1Q15276 862 aa13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 C8orf34Q49A92 452 aa13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 ATF7IP2Q5U623 682 aa13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 PDXDC1Q6P996 788 aa13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 LILRA6Q6PI73 481 aa13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 DTHD1Q6ZMT9 781 aa13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 SPATA31D4Q6ZUB0 917 aa13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 SMG7Q92540 1137 aaKnown RBP13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 PAAF1Q9BRP4 392 aa13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 TTPALQ9BTX7 342 aa13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 SMOC2Q9H3U7 446 aa13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 KCNK12Q9HB15 430 aa13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 POLD4Q9HCU8 107 aa13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 USP20Q9Y2K6 914 aa13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 PCDHB6Q9Y5E3 794 aa13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 PHLPP2Q6ZVD8 1323 aa13.28□□□□□ -0.28
PDLIM7-214ENST00000505746 ARID2Q68CP9 1835 aa13.27□□□□□ -0.28
PDLIM7-214ENST00000505746 CCDC169A6NNP5 214 aa13.27□□□□□ -0.29
PDLIM7-214ENST00000505746 ST18O60284 1047 aa13.27□□□□□ -0.29
PDLIM7-214ENST00000505746 RFPL2O75678 378 aa13.27□□□□□ -0.29
PDLIM7-214ENST00000505746 PAPLNO95428 1278 aa13.27□□□□□ -0.29
PDLIM7-214ENST00000505746 GBP2P32456 591 aaPredicted RBP13.27□□□□□ -0.29
PDLIM7-214ENST00000505746 RTP2Q5QGT7 225 aa13.27□□□□□ -0.29
PDLIM7-214ENST00000505746 FAM171A1Q5VUB5 890 aa13.27□□□□□ -0.29
PDLIM7-214ENST00000505746 EEF1DP3Q658K8 133 aa13.27□□□□□ -0.29
PDLIM7-214ENST00000505746 CEP57Q86XR8 500 aa13.27□□□□□ -0.29
PDLIM7-214ENST00000505746 GLYCTKQ8IVS8 523 aa13.27□□□□□ -0.29
PDLIM7-214ENST00000505746 HASPINQ8TF76 798 aa13.27□□□□□ -0.29
PDLIM7-214ENST00000505746 PIK3R5Q8WYR1 880 aa13.27□□□□□ -0.29
PDLIM7-214ENST00000505746 KIFC3Q9BVG8 833 aa13.27□□□□□ -0.29
PDLIM7-214ENST00000505746 PRKD2Q9BZL6 878 aa13.27□□□□□ -0.29
PDLIM7-214ENST00000505746 NT5C3AQ9H0P0 336 aa13.27□□□□□ -0.29
PDLIM7-214ENST00000505746 CACNG4Q9UBN1 327 aa13.27□□□□□ -0.29
PDLIM7-214ENST00000505746 TNFSF13BQ9Y275 285 aa13.27□□□□□ -0.29
PDLIM7-214ENST00000505746 GDAQ9Y2T3 454 aa13.27□□□□□ -0.29
PDLIM7-214ENST00000505746 CLUHO75153 1309 aa13.27□□□□□ -0.29
PDLIM7-214ENST00000505746 E9PMD0 336 aa13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 GALR2O43603 387 aaPredicted RBP13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 KIF4AO95239 1232 aa13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 RPL17P18621 184 aaKnown RBP13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 NPTX2P47972 431 aa13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 CLCN5P51795 746 aa13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 YARSP54577 528 aaKnown RBP13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 PEX3P56589 373 aa13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 NAB2Q15742 525 aa13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 RILPL1Q5EBL4 403 aa13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 NT5DC1Q5TFE4 455 aa13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 MCTP1Q6DN14 999 aa13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 ASTLQ6HA08 431 aaPredicted RBP13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 DCLRE1AQ6PJP8 1040 aa13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 PRSS55Q6UWB4 352 aaPredicted RBP13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 KCTD17Q8N5Z5 321 aa13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 LNX1Q8TBB1 728 aaPredicted RBP13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 NXPE3Q969Y0 559 aa13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 ZNF707Q96C28 371 aaPredicted RBP13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 DRC1Q96MC2 740 aa13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 UROC1Q96N76 676 aa13.26□□□□□ -0.29
PDLIM7-214ENST00000505746 TMEM134Q9H6X4 195 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms