RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 IZUMO3Q5VZ72 239 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 ARRDC4Q8NCT1 418 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 APIPQ96GX9 242 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 ZC3H10Q96K80 434 aaKnown RBP4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 HIST1H2AHQ96KK5 128 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 C8orf49Q96NF6 230 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 RBM15Q96T37 977 aaKnown RBP eCLIP4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 HIST1H2AJQ99878 128 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 PTPN18Q99952 460 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 SPATA25Q9BR10 227 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 KRTAP3-1Q9BYR8 98 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 MTG2Q9H4K7 406 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 DMRT3Q9NQL9 472 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 STARD7Q9NQZ5 370 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 UCKL1Q9NWZ5 548 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 SWAP70Q9UH65 585 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 SYNPO2Q9UMS6 1093 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 WASF3Q9UPY6 502 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 PCDHB6Q9Y5E3 794 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 SNX13Q9Y5W8 968 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 NR2E3Q9Y5X4 410 aa4.71□□□□□ -1.66
TRAPPC13-208ENST00000505553 SRGAP3O43295 1099 aa4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 ARIH2O95376 493 aa4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 HSD3B1P14060 373 aa4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 TNFSF4P23510 183 aa4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 PPM1AP35813 382 aa4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 LIMS1P48059 325 aa4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 CASP5P51878 434 aa4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 MAP2K6P52564 334 aa4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 FGL2Q14314 439 aa4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 NOLC1Q14978 699 aaKnown RBP eCLIP4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 MMS22LQ6ZRQ5 1243 aa4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 PCGF5Q86SE9 256 aa4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 GLB1L2Q8IW92 636 aa4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 DRC7Q8IY82 874 aa4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 CHST13Q8NET6 341 aa4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 WDR48Q8TAF3 677 aa4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 RIN2Q8WYP3 895 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 DVL3Q92997 716 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 FAM167AQ96KS9 214 aa4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 C7orf25Q9BPX7 421 aa4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 NOL10Q9BSC4 688 aaKnown RBP4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 ISCA1Q9BUE6 129 aa4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 PITHD1Q9GZP4 211 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 CERS4Q9HA82 394 aa4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 KIAA1586Q9HCI6 787 aa4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 RBM12Q9NTZ6 932 aaKnown RBP4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 HSPBP1Q9NZL4 362 aa4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 FTSJ1Q9UET6 329 aa4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 FBXO9Q9UK97 447 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 SIT1Q9Y3P8 196 aa4.7□□□□□ -1.66
TRAPPC13-208ENST00000505553 DDX3XO00571 662 aaKnown RBP eCLIP4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 PHGDHO43175 533 aaKnown RBP4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 SLC26A4O43511 780 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 SGTAO43765 313 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 TLR5O60602 858 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 OPHN1O60890 802 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 HSP90AA1P07900 732 aaKnown RBP4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 COL6A1P12109 1028 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 IGFBP6P24592 240 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 APEX1P27695 318 aaKnown RBP4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 MAN1A1P33908 653 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 RAB1AP62820 205 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 PRR5P85299 388 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 FOXO4P98177 505 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 MGAT2Q10469 447 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 NFATC3Q12968 1075 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 IL10RAQ13651 578 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 VWA3BQ502W6 1294 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 FAM209BQ5JX69 171 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 SWSAP1Q6NVH7 229 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 APOA5Q6Q788 366 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 GLB1L3Q8NCI6 653 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 BRI3BPQ8WY22 251 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 ARL8AQ96BM9 186 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 TOE1Q96GM8 510 aaKnown RBP4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 C22orf23Q9BZE7 217 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 ZHX3Q9H4I2 956 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 AGO4Q9HCK5 861 aaKnown RBP4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 INCENPQ9NQS7 918 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 GALNT8Q9NY28 637 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 GPRC5BQ9NZH0 403 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 DTLQ9NZJ0 730 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 KCMF1Q9P0J7 381 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 PGAP2Q9UHJ9 254 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 EVLQ9UI08 416 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 SCOCQ9UIL1 159 aa4.69□□□□□ -1.66
TRAPPC13-208ENST00000505553 A0A0A6YYJ9 748 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 ISM1B1AKI9 464 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 KPNA5O15131 536 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 CUTAO60888 179 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 ENO2P09104 434 aaPredicted RBP4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 NCAM1P13591 858 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 ABCB4P21439 1286 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 MC4RP32245 332 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 DDIT3P35638 169 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 CHKAP35790 457 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 TECP42680 631 aa4.68□□□□□ -1.66
TRAPPC13-208ENST00000505553 STT3AP46977 705 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms