RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 PREBQ9HCU5 417 aa5.79□□□□□ -1.48
NIPBL-204ENST00000504430 ZNF277Q9NRM2 450 aaPredicted RBP5.79□□□□□ -1.48
NIPBL-204ENST00000504430 PCDHGC5Q9Y5F6 944 aa5.79□□□□□ -1.48
NIPBL-204ENST00000504430 A0A1W2PPL8 197 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 TCRBV5S4A2TA0A5A2 114 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 H0Y626 953 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 AP3D1O14617 1153 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 ENDOD1O94919 500 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 HNRNPA1P09651 372 aaKnown RBP eCLIP5.78□□□□□ -1.48
NIPBL-204ENST00000504430 STMN1P16949 149 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 GPR85P60893 370 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 LASP1Q14847 261 aaKnown RBP5.78□□□□□ -1.48
NIPBL-204ENST00000504430 C3orf38Q5JPI3 329 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 SAMD5Q5TGI4 173 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 ANGEL2Q5VTE6 544 aaKnown RBP5.78□□□□□ -1.48
NIPBL-204ENST00000504430 SNX30Q5VWJ9 437 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 UNQ6494/PRO21346Q6UXR6 183 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 RAPH1Q70E73 1250 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 C2CD5Q86YS7 1000 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.78□□□□□ -1.48
NIPBL-204ENST00000504430 LRRC71Q8N4P6 559 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 TRIM47Q96LD4 638 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 PAIP2Q9BPZ3 127 aaKnown RBP5.78□□□□□ -1.48
NIPBL-204ENST00000504430 POLR3CQ9BUI4 534 aaPredicted RBP5.78□□□□□ -1.48
NIPBL-204ENST00000504430 WDR18Q9BV38 432 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 PRDM5Q9NQX1 630 aaPredicted RBP5.78□□□□□ -1.48
NIPBL-204ENST00000504430 C5AR2Q9P296 337 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 FAM184BQ9ULE4 1060 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 KNSTRNQ9Y448 316 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 PIAS3Q9Y6X2 628 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 HMX3A6NHT5 357 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 SOBPA7XYQ1 873 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 ZBTB43O43298 467 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 MTSS1O43312 755 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 F11P03951 625 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 IL11P20809 199 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 MC4RP32245 332 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 TDGQ13569 410 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 FYB2Q5VWT5 728 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 OTUD6AQ7L8S5 288 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.78□□□□□ -1.48
NIPBL-204ENST00000504430 ST8SIA4Q92187 359 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 LTV1Q96GA3 475 aaPredicted RBP5.78□□□□□ -1.48
NIPBL-204ENST00000504430 PPP1R9BQ96SB3 815 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 OR10A4Q9H209 315 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 ZNF624Q9P2J8 865 aaPredicted RBP5.78□□□□□ -1.48
NIPBL-204ENST00000504430 DNAJB9Q9UBS3 223 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 CFAP45Q9UL16 551 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 ZNF281Q9Y2X9 895 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 PCDHB12Q9Y5F1 795 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 SPO11Q9Y5K1 396 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 H7C1D1 291 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 DAPK3O43293 454 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 SNX4O95219 450 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 FTLP02792 175 aaPredicted RBP5.78□□□□□ -1.48
NIPBL-204ENST00000504430 CCDC159P0C7I6 412 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 HDCP19113 662 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 VCAM1P19320 739 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 TMOD1P28289 359 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 TGFB2P61812 414 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 TMED1Q13445 227 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 CUL4AQ13619 759 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 CUL4BQ13620 913 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 SLBPQ14493 270 aaKnown RBP eCLIP5.78□□□□□ -1.48
NIPBL-204ENST00000504430 TBCCQ15814 346 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 TMEM266Q2M3C6 531 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 KCNK18Q7Z418 384 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 STT3BQ8TCJ2 826 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 KLHDC7BQ96G42 594 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 DNAI2Q9GZS0 605 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 PCIF1Q9H4Z3 704 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 SUDS3Q9H7L9 328 aaPredicted RBP5.78□□□□□ -1.48
NIPBL-204ENST00000504430 POGKQ9P215 609 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 SIK3Q9Y2K2 1263 aa5.78□□□□□ -1.48
NIPBL-204ENST00000504430 SCDO00767 359 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 HTRA2O43464 458 aaPredicted RBP5.77□□□□□ -1.49
NIPBL-204ENST00000504430 LARGE1O95461 756 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 FAM157BP0CG42 384 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 CCR9P51686 369 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 MAPK7Q13164 816 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 TTC31Q49AM3 519 aaPredicted RBP5.77□□□□□ -1.49
NIPBL-204ENST00000504430 KLHL10Q6JEL2 608 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 HERC6Q8IVU3 1022 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 PPP1R13LQ8WUF5 828 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 CYB5D2Q8WUJ1 264 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 LRRC46Q96FV0 321 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 APIPQ96GX9 242 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 DACH2Q96NX9 599 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 TRERF1Q96PN7 1200 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 SEPT11Q9NVA2 429 aaKnown RBP5.77□□□□□ -1.49
NIPBL-204ENST00000504430 ARGLU1Q9NWB6 273 aaPredicted RBP5.77□□□□□ -1.49
NIPBL-204ENST00000504430 TRIM17Q9Y577 477 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 FAM25EA8MYX2 175 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 UBE2CO00762 179 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 APOL3O95236 402 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 SCG5P05408 212 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 ATP5BP06576 529 aaKnown RBP5.77□□□□□ -1.49
NIPBL-204ENST00000504430 HMOX1P09601 288 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 P4HA1P13674 534 aa5.77□□□□□ -1.49
NIPBL-204ENST00000504430 BRAFP15056 766 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms