RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 DOCK6Q96HP0 2047 aa15.41■□□□□ 0.06
PDLIM7-211ENST00000504318 H3BQV1 296 aa15.41■□□□□ 0.06
PDLIM7-211ENST00000504318 TEX28O15482 410 aa15.41■□□□□ 0.06
PDLIM7-211ENST00000504318 BRD1O95696 1058 aa15.41■□□□□ 0.06
PDLIM7-211ENST00000504318 SSBP05455 408 aaKnown RBP eCLIP15.41■□□□□ 0.06
PDLIM7-211ENST00000504318 PEX3P56589 373 aa15.41■□□□□ 0.06
PDLIM7-211ENST00000504318 TUSC3Q13454 348 aa15.41■□□□□ 0.06
PDLIM7-211ENST00000504318 PTPAQ15257 358 aa15.41■□□□□ 0.06
PDLIM7-211ENST00000504318 TPRNQ4KMQ1 711 aa15.41■□□□□ 0.06
PDLIM7-211ENST00000504318 ATF7IP2Q5U623 682 aa15.41■□□□□ 0.06
PDLIM7-211ENST00000504318 KIAA1841Q6NSI8 718 aa15.41■□□□□ 0.06
PDLIM7-211ENST00000504318 FUT10Q6P4F1 479 aa15.41■□□□□ 0.06
PDLIM7-211ENST00000504318 BRAPQ7Z569 592 aa15.41■□□□□ 0.06
PDLIM7-211ENST00000504318 GPR65Q8IYL9 337 aa15.41■□□□□ 0.06
PDLIM7-211ENST00000504318 B3GALT6Q96L58 329 aa15.41■□□□□ 0.06
PDLIM7-211ENST00000504318 IFT74Q96LB3 600 aa15.41■□□□□ 0.06
PDLIM7-211ENST00000504318 PPP1R10Q96QC0 940 aaKnown RBP15.41■□□□□ 0.06
PDLIM7-211ENST00000504318 CDT1Q9H211 546 aa15.41■□□□□ 0.06
PDLIM7-211ENST00000504318 C17orf75Q9HAS0 396 aa15.41■□□□□ 0.06
PDLIM7-211ENST00000504318 PARP2Q9UGN5 583 aa15.41■□□□□ 0.06
PDLIM7-211ENST00000504318 ADAM28Q9UKQ2 775 aa15.41■□□□□ 0.06
PDLIM7-211ENST00000504318 MYH15Q9Y2K3 1946 aa15.41■□□□□ 0.06
PDLIM7-211ENST00000504318 KIF4AO95239 1232 aa15.4■□□□□ 0.06
PDLIM7-211ENST00000504318 WEE2P0C1S8 567 aa15.4■□□□□ 0.06
PDLIM7-211ENST00000504318 GLUD2P49448 558 aa15.4■□□□□ 0.06
PDLIM7-211ENST00000504318 RESTQ13127 1097 aa15.4■□□□□ 0.06
PDLIM7-211ENST00000504318 DCAF4L1Q3SXM0 396 aa15.4■□□□□ 0.06
PDLIM7-211ENST00000504318 RARS2Q5T160 578 aaKnown RBP15.4■□□□□ 0.06
PDLIM7-211ENST00000504318 HACE1Q8IYU2 909 aa15.4■□□□□ 0.06
PDLIM7-211ENST00000504318 TMEM161BQ8NDZ6 487 aa15.4■□□□□ 0.06
PDLIM7-211ENST00000504318 SPIRE2Q8WWL2 714 aa15.4■□□□□ 0.06
PDLIM7-211ENST00000504318 EDAQ92838 391 aa15.4■□□□□ 0.06
PDLIM7-211ENST00000504318 RPGRIP1Q96KN7 1286 aa15.4■□□□□ 0.06
PDLIM7-211ENST00000504318 DRC1Q96MC2 740 aa15.4■□□□□ 0.06
PDLIM7-211ENST00000504318 FBXL18Q96ME1 805 aa15.4■□□□□ 0.06
PDLIM7-211ENST00000504318 FIZ1Q96SL8 496 aa15.4■□□□□ 0.06
PDLIM7-211ENST00000504318 PLIN2Q99541 437 aa15.4■□□□□ 0.06
PDLIM7-211ENST00000504318 TIPINQ9BVW5 301 aa15.4■□□□□ 0.06
PDLIM7-211ENST00000504318 MRPL17Q9NRX2 175 aaKnown RBP15.4■□□□□ 0.06
PDLIM7-211ENST00000504318 MUC6Q6W4X9 2439 aa15.4■□□□□ 0.06
PDLIM7-211ENST00000504318 WDFY4Q6ZS81 3184 aa15.4■□□□□ 0.06
PDLIM7-211ENST00000504318 KMT2EQ8IZD2 1858 aa15.4■□□□□ 0.06
PDLIM7-211ENST00000504318 NPHP3-ACAD11A0A0J9YXS1 232 aa15.39■□□□□ 0.05
PDLIM7-211ENST00000504318 SFI1A8K8P3 1242 aa15.39■□□□□ 0.05
PDLIM7-211ENST00000504318 C2CD4DB7Z1M9 353 aa15.39■□□□□ 0.05
PDLIM7-211ENST00000504318 SLC26A4O43511 780 aa15.39■□□□□ 0.05
PDLIM7-211ENST00000504318 PLA2G4BP0C869 781 aa15.39■□□□□ 0.05
PDLIM7-211ENST00000504318 ZXDAP98168 799 aa15.39■□□□□ 0.05
PDLIM7-211ENST00000504318 HSP90AA2PQ14568 343 aaPredicted RBP15.39■□□□□ 0.05
PDLIM7-211ENST00000504318 BMS1Q14692 1282 aaKnown RBP15.39■□□□□ 0.05
PDLIM7-211ENST00000504318 SF3A1Q15459 793 aaKnown RBP15.39■□□□□ 0.05
PDLIM7-211ENST00000504318 RTP2Q5QGT7 225 aa15.39■□□□□ 0.05
PDLIM7-211ENST00000504318 LILRA6Q6PI73 481 aa15.39■□□□□ 0.05
PDLIM7-211ENST00000504318 HFE2Q6ZVN8 426 aa15.39■□□□□ 0.05
PDLIM7-211ENST00000504318 PPFIBP1Q86W92 1011 aa15.39■□□□□ 0.05
PDLIM7-211ENST00000504318 AK8Q96MA6 479 aa15.39■□□□□ 0.05
PDLIM7-211ENST00000504318 TARS2Q9BW92 718 aaKnown RBP15.39■□□□□ 0.05
PDLIM7-211ENST00000504318 COLEC11Q9BWP8 271 aa15.39■□□□□ 0.05
PDLIM7-211ENST00000504318 RHOBTB2Q9BYZ6 727 aa15.39■□□□□ 0.05
PDLIM7-211ENST00000504318 HAPLN2Q9GZV7 340 aa15.39■□□□□ 0.05
PDLIM7-211ENST00000504318 NT5C3AQ9H0P0 336 aa15.39■□□□□ 0.05
PDLIM7-211ENST00000504318 KCND2Q9NZV8 630 aa15.39■□□□□ 0.05
PDLIM7-211ENST00000504318 DAXXQ9UER7 740 aaPredicted RBP15.39■□□□□ 0.05
PDLIM7-211ENST00000504318 ARIH1Q9Y4X5 557 aaPredicted RBP15.39■□□□□ 0.05
PDLIM7-211ENST00000504318 CASTOR2A6NHX0 329 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 TMEM189-UBE2V1I3L0A0 370 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 K7ERI5 159 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 C2CD2LO14523 706 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 SLC16A4O15374 487 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 C1RP00736 705 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 URODP06132 367 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 THP07101 528 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 MAPTP10636 758 aaKnown RBP15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 PLS3P13797 630 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 LIG1P18858 919 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 SYT1P21579 422 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 CA8P35219 290 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 GRM5P41594 1212 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 ZNF131P52739 623 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 SOX4Q06945 474 aaPredicted RBP15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 DMP1Q13316 513 aaPredicted RBP15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 GPR149Q86SP6 731 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 CABP7Q86V35 215 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 C3orf58Q8NDZ4 430 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 CMASQ8NFW8 434 aaPredicted RBP15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 ASIC4Q96FT7 647 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 INTS4Q96HW7 963 aaKnown RBP15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 ZBTB45Q96K62 511 aaPredicted RBP15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 ZMAT2Q96NC0 199 aaKnown RBP15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 NECTIN4Q96NY8 510 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 ADPGKQ9BRR6 497 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 EMILIN2Q9BXX0 1053 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 SFXN1Q9H9B4 322 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 KMT5AQ9NQR1 393 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 FNIP2Q9P278 1114 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 GDAQ9Y2T3 454 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 NOTCH4Q99466 2003 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 ZDBF2Q9HCK1 2354 aa15.38■□□□□ 0.05
PDLIM7-211ENST00000504318 CCDC169A6NNP5 214 aa15.37■□□□□ 0.05
PDLIM7-211ENST00000504318 KLRC2P26717 231 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms