RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 DZANK1Q9NVP4 752 aa4.14□□□□□ -1.75
USP46-205ENST00000504078 SPATA6Q9NWH7 488 aaPredicted RBP4.14□□□□□ -1.75
USP46-205ENST00000504078 TMEM161AQ9NX61 479 aa4.14□□□□□ -1.75
USP46-205ENST00000504078 SPG21Q9NZD8 308 aa4.14□□□□□ -1.75
USP46-205ENST00000504078 ZSWIM5Q9P217 1185 aa4.14□□□□□ -1.75
USP46-205ENST00000504078 DNAJB4Q9UDY4 337 aa4.14□□□□□ -1.75
USP46-205ENST00000504078 AKT3Q9Y243 479 aa4.14□□□□□ -1.75
USP46-205ENST00000504078 MYH15Q9Y2K3 1946 aa4.14□□□□□ -1.75
USP46-205ENST00000504078 FAM186AA6NE01 2351 aa4.14□□□□□ -1.75
USP46-205ENST00000504078 CLUHO75153 1309 aa4.14□□□□□ -1.75
USP46-205ENST00000504078 KMT2BQ9UMN6 2715 aaPredicted RBP4.14□□□□□ -1.75
USP46-205ENST00000504078 BAZ2BQ9UIF8 2168 aaKnown RBP4.13□□□□□ -1.75
USP46-205ENST00000504078 GVINP1Q7Z2Y8 2422 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 FRYLO94915 3013 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 FANCMQ8IYD8 2048 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.13□□□□□ -1.75
USP46-205ENST00000504078 FSD2A1L4K1 749 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 TMEM150BA6NC51 233 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 KIAA1324LA8MWY0 1029 aaPredicted RBP4.13□□□□□ -1.75
USP46-205ENST00000504078 F8W810 466 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 MEIS2O14770 477 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 INPPL1O15357 1258 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 C22orf31O95567 290 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 CCNE2O96020 404 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 SPATA31D3P0C874 917 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 FSTP19883 344 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 KLRC1P26715 233 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 SLC11A1P49279 550 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 PDE1AP54750 535 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 ACTR2P61160 394 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 NTHL1P78549 312 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 PLCB3Q01970 1234 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 KRT17Q04695 432 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 CSTF1Q05048 431 aaKnown RBP4.13□□□□□ -1.75
USP46-205ENST00000504078 TBC1D8BQ0IIM8 1120 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 SPEM2Q0P670 501 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 SRSF5Q13243 272 aaKnown RBP4.13□□□□□ -1.75
USP46-205ENST00000504078 ITGB3BPQ13352 177 aaPredicted RBP4.13□□□□□ -1.75
USP46-205ENST00000504078 DSC3Q14574 896 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 WTAPQ15007 396 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 SEC23AQ15436 765 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 PTPN14Q15678 1187 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 CCDC6Q16204 474 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 TSGA10IPQ3SY00 556 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 ATAT1Q5SQI0 421 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 ANKRD45Q5TZF3 282 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 PDE12Q6L8Q7 609 aaKnown RBP4.13□□□□□ -1.75
USP46-205ENST00000504078 PRR23BQ6ZRT6 265 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 SPATA31D4Q6ZUB0 917 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 SLC24A5Q71RS6 500 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 ECHDC2Q86YB7 292 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 C1orf210Q8IVY1 113 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 CKAP2LQ8IYA6 745 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 MAML2Q8IZL2 1156 aaPredicted RBP4.13□□□□□ -1.75
USP46-205ENST00000504078 PHTF2Q8N3S3 785 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 MRPL43Q8N983 215 aaKnown RBP4.13□□□□□ -1.75
USP46-205ENST00000504078 PJA1Q8NG27 643 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 SLC22A17Q8WUG5 538 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 ACSF2Q96CM8 615 aaPredicted RBP4.13□□□□□ -1.75
USP46-205ENST00000504078 B3GALT6Q96L58 329 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 KXD1Q9BQD3 176 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 LNPKQ9C0E8 428 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 AZI2Q9H6S1 392 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 RGS18Q9NS28 235 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 C1orf112Q9NSG2 853 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 DIAPH3Q9NSV4 1193 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 DLGAP2Q9P1A6 1054 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 CACNG4Q9UBN1 327 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 SLC9A2Q9UBY0 812 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 PUF60Q9UHX1 559 aaKnown RBP4.13□□□□□ -1.75
USP46-205ENST00000504078 RCAN3Q9UKA8 241 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 ZNF232Q9UNY5 417 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 LZTS1Q9Y250 596 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 PRG3Q9Y2Y8 225 aaPredicted RBP4.13□□□□□ -1.75
USP46-205ENST00000504078 MTF2Q9Y483 593 aaPredicted RBP4.13□□□□□ -1.75
USP46-205ENST00000504078 PCDHA2Q9Y5H9 948 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 NUMBLQ9Y6R0 609 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 MYO10Q9HD67 2058 aa4.13□□□□□ -1.75
USP46-205ENST00000504078 PNMA6FA0A0J9YX94 578 aa4.12□□□□□ -1.75
USP46-205ENST00000504078 SMIM35A0A1B0GVV1 85 aa4.12□□□□□ -1.75
USP46-205ENST00000504078 PALM3A6NDB9 673 aaPredicted RBP4.12□□□□□ -1.75
USP46-205ENST00000504078 RRN3P2A6NIE6 340 aa4.12□□□□□ -1.75
USP46-205ENST00000504078 ZBTB42B2RXF5 422 aa4.12□□□□□ -1.75
USP46-205ENST00000504078 CCER2I3L3R5 266 aa4.12□□□□□ -1.75
USP46-205ENST00000504078 IFIT3O14879 490 aaKnown RBP4.12□□□□□ -1.75
USP46-205ENST00000504078 LAMTOR5O43504 91 aa4.12□□□□□ -1.75
USP46-205ENST00000504078 ADRB1P08588 477 aa4.12□□□□□ -1.75
USP46-205ENST00000504078 CNPP09543 421 aaKnown RBP4.12□□□□□ -1.75
USP46-205ENST00000504078 SRFP11831 508 aa4.12□□□□□ -1.75
USP46-205ENST00000504078 RPL17P18621 184 aaKnown RBP4.12□□□□□ -1.75
USP46-205ENST00000504078 SDSP20132 328 aa4.12□□□□□ -1.75
USP46-205ENST00000504078 SPINK2P20155 84 aa4.12□□□□□ -1.75
USP46-205ENST00000504078 TARSP26639 723 aaKnown RBP4.12□□□□□ -1.75
USP46-205ENST00000504078 KLRC2P26717 231 aa4.12□□□□□ -1.75
USP46-205ENST00000504078 HOXC13P31276 330 aa4.12□□□□□ -1.75
USP46-205ENST00000504078 KIF5BP33176 963 aa4.12□□□□□ -1.75
USP46-205ENST00000504078 STAT5BP51692 787 aa4.12□□□□□ -1.75
USP46-205ENST00000504078 CLCN4P51793 760 aa4.12□□□□□ -1.75
USP46-205ENST00000504078 AFF1P51825 1210 aaKnown RBP4.12□□□□□ -1.75
USP46-205ENST00000504078 AK2P54819 239 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms