RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 CLSTN3Q9BQT9 956 aa17.65■□□□□ 0.42
PDLIM7-210ENST00000503827 TRIM6Q9C030 488 aaPredicted RBP17.65■□□□□ 0.42
PDLIM7-210ENST00000503827 CHRDQ9H2X0 955 aa17.65■□□□□ 0.42
PDLIM7-210ENST00000503827 NAP1L2Q9ULW6 460 aaPredicted RBP17.65■□□□□ 0.42
PDLIM7-210ENST00000503827 NDRG2Q9UN36 371 aaKnown RBP17.65■□□□□ 0.42
PDLIM7-210ENST00000503827 CCDC196A0A1B0GTZ2 297 aa17.64■□□□□ 0.41
PDLIM7-210ENST00000503827 MAN2B1O00754 1011 aa17.64■□□□□ 0.41
PDLIM7-210ENST00000503827 ASAP2O43150 1006 aa17.64■□□□□ 0.41
PDLIM7-210ENST00000503827 EDIL3O43854 480 aa17.64■□□□□ 0.41
PDLIM7-210ENST00000503827 ADD1P35611 737 aaKnown RBP17.64■□□□□ 0.41
PDLIM7-210ENST00000503827 CCR3P51677 355 aa17.64■□□□□ 0.41
PDLIM7-210ENST00000503827 RCAN1P53805 252 aa17.64■□□□□ 0.41
PDLIM7-210ENST00000503827 SIM2Q14190 667 aaPredicted RBP17.64■□□□□ 0.41
PDLIM7-210ENST00000503827 PABPC1LQ4VXU2 614 aaKnown RBP17.64■□□□□ 0.41
PDLIM7-210ENST00000503827 IL31Q6EBC2 164 aa17.64■□□□□ 0.41
PDLIM7-210ENST00000503827 B3GNT9Q6UX72 402 aa17.64■□□□□ 0.41
PDLIM7-210ENST00000503827 RNF149Q8NC42 400 aa17.64■□□□□ 0.41
PDLIM7-210ENST00000503827 RABGGTAQ92696 567 aa17.64■□□□□ 0.41
PDLIM7-210ENST00000503827 DNASE1L2Q92874 299 aa17.64■□□□□ 0.41
PDLIM7-210ENST00000503827 TCEANC2Q96MN5 208 aa17.64■□□□□ 0.41
PDLIM7-210ENST00000503827 CSRNP2Q9H175 543 aa17.64■□□□□ 0.41
PDLIM7-210ENST00000503827 SH2B1Q9NRF2 756 aaPredicted RBP17.64■□□□□ 0.41
PDLIM7-210ENST00000503827 GDF9O60383 454 aa17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 DKC1O60832 514 aaKnown RBP eCLIP17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 POU2F2P09086 479 aa17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 PMLP29590 882 aa17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 RFC5P40937 340 aa17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 NPEPPSP55786 919 aa17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 EXOSC10Q01780 885 aaKnown RBP17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 GRIK3Q13003 919 aa17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 PSMD5Q16401 504 aa17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 UVSSAQ2YD98 709 aa17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 Q4G0T1 1027 aa17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 DHX32Q7L7V1 743 aaKnown RBP17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 CEP57Q86XR8 500 aa17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 CCDC148Q8NFR7 591 aa17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 SLC7A14Q8TBB6 771 aa17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 TCP11Q8WWU5 503 aa17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 ING5Q8WYH8 240 aa17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 PIK3R5Q8WYR1 880 aa17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 CPB2Q96IY4 423 aa17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 CEP170P1Q96L14 293 aa17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 TTPALQ9BTX7 342 aa17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 PLA2G2FQ9BZM2 168 aa17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 DHX33Q9H6R0 707 aaKnown RBP17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 HCFC1R1Q9NWW0 138 aa17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 MRPS23Q9Y3D9 190 aaKnown RBP17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 PPME1Q9Y570 386 aa17.63■□□□□ 0.41
PDLIM7-210ENST00000503827 FAM208BQ5VWN6 2430 aa17.62■□□□□ 0.41
PDLIM7-210ENST00000503827 TSPAN1O60635 241 aa17.62■□□□□ 0.41
PDLIM7-210ENST00000503827 SHC2P98077 582 aa17.62■□□□□ 0.41
PDLIM7-210ENST00000503827 HSP90AA2PQ14568 343 aaPredicted RBP17.62■□□□□ 0.41
PDLIM7-210ENST00000503827 AXDND1Q5T1B0 1012 aaPredicted RBP17.62■□□□□ 0.41
PDLIM7-210ENST00000503827 RNF20Q5VTR2 975 aa17.62■□□□□ 0.41
PDLIM7-210ENST00000503827 FAM171A1Q5VUB5 890 aa17.62■□□□□ 0.41
PDLIM7-210ENST00000503827 PDXDC1Q6P996 788 aa17.62■□□□□ 0.41
PDLIM7-210ENST00000503827 GSTCDQ8NEC7 633 aa17.62■□□□□ 0.41
PDLIM7-210ENST00000503827 LNX1Q8TBB1 728 aaPredicted RBP17.62■□□□□ 0.41
PDLIM7-210ENST00000503827 MCRS1Q96EZ8 462 aa17.62■□□□□ 0.41
PDLIM7-210ENST00000503827 GDE1Q9NZC3 331 aa17.62■□□□□ 0.41
PDLIM7-210ENST00000503827 DNMT3BQ9UBC3 853 aaKnown RBP17.62■□□□□ 0.41
PDLIM7-210ENST00000503827 ARID2Q68CP9 1835 aa17.62■□□□□ 0.41
PDLIM7-210ENST00000503827 GREB1Q4ZG55 1949 aa17.62■□□□□ 0.41
PDLIM7-210ENST00000503827 TICRRQ7Z2Z1 1910 aa17.62■□□□□ 0.41
PDLIM7-210ENST00000503827 VWA8A3KMH1 1905 aa17.61■□□□□ 0.41
PDLIM7-210ENST00000503827 SHISA7A6NL88 538 aa17.61■□□□□ 0.41
PDLIM7-210ENST00000503827 PRPF3O43395 683 aaKnown RBP17.61■□□□□ 0.41
PDLIM7-210ENST00000503827 AKAP5P24588 427 aa17.61■□□□□ 0.41
PDLIM7-210ENST00000503827 QARSP47897 775 aaKnown RBP17.61■□□□□ 0.41
PDLIM7-210ENST00000503827 AKAP17AQ02040 695 aaKnown RBP17.61■□□□□ 0.41
PDLIM7-210ENST00000503827 N4BP2L1Q5TBK1 243 aaPredicted RBP17.61■□□□□ 0.41
PDLIM7-210ENST00000503827 FERMT3Q86UX7 667 aa17.61■□□□□ 0.41
PDLIM7-210ENST00000503827 ZNF579Q8NAF0 562 aaKnown RBP17.61■□□□□ 0.41
PDLIM7-210ENST00000503827 TBCKQ8TEA7 893 aa17.61■□□□□ 0.41
PDLIM7-210ENST00000503827 ELSPBP1Q96BH3 223 aa17.61■□□□□ 0.41
PDLIM7-210ENST00000503827 NXF3Q9H4D5 531 aaKnown RBP17.61■□□□□ 0.41
PDLIM7-210ENST00000503827 BRD9Q9H8M2 597 aa17.61■□□□□ 0.41
PDLIM7-210ENST00000503827 LMAN1LQ9HAT1 526 aa17.61■□□□□ 0.41
PDLIM7-210ENST00000503827 BMP2KQ9NSY1 1161 aaPredicted RBP17.61■□□□□ 0.41
PDLIM7-210ENST00000503827 ATRXP46100 2492 aa17.6■□□□□ 0.41
PDLIM7-210ENST00000503827 INO80B-WBP1J3KQ70 363 aa17.6■□□□□ 0.41
PDLIM7-210ENST00000503827 CNR2P34972 360 aa17.6■□□□□ 0.41
PDLIM7-210ENST00000503827 CXCL12P48061 93 aa17.6■□□□□ 0.41
PDLIM7-210ENST00000503827 TANGO2Q6ICL3 276 aa17.6■□□□□ 0.41
PDLIM7-210ENST00000503827 RTL10Q7L3V2 364 aa17.6■□□□□ 0.41
PDLIM7-210ENST00000503827 ZNF687Q8N1G0 1237 aa17.6■□□□□ 0.41
PDLIM7-210ENST00000503827 HASPINQ8TF76 798 aa17.6■□□□□ 0.41
PDLIM7-210ENST00000503827 FAM3CQ92520 227 aa17.6■□□□□ 0.41
PDLIM7-210ENST00000503827 C22orf23Q9BZE7 217 aa17.6■□□□□ 0.41
PDLIM7-210ENST00000503827 ANO2Q9NQ90 1003 aa17.6■□□□□ 0.41
PDLIM7-210ENST00000503827 KLK14Q9P0G3 267 aa17.6■□□□□ 0.41
PDLIM7-210ENST00000503827 PARP2Q9UGN5 583 aa17.6■□□□□ 0.41
PDLIM7-210ENST00000503827 ZMYM2Q9UBW7 1377 aa17.6■□□□□ 0.41
PDLIM7-210ENST00000503827 PDCD11Q14690 1871 aaKnown RBP17.6■□□□□ 0.41
PDLIM7-210ENST00000503827 HRO43593 1189 aa17.59■□□□□ 0.41
PDLIM7-210ENST00000503827 TDP2O95551 362 aa17.59■□□□□ 0.41
PDLIM7-210ENST00000503827 PROS1P07225 676 aa17.59■□□□□ 0.41
PDLIM7-210ENST00000503827 PTENP60484 403 aa17.59■□□□□ 0.41
PDLIM7-210ENST00000503827 FGD1P98174 961 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms