RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 PTX3P26022 381 aaPredicted RBP4.11□□□□□ -1.75
SUB1-202ENST00000502453 MAPK3P27361 379 aaPredicted RBP4.11□□□□□ -1.75
SUB1-202ENST00000502453 ACSL1P33121 698 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 LSP1P33241 339 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 GPR85P60893 370 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 RAB1AP62820 205 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 CHAF1BQ13112 559 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 TDGQ13569 410 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 ZNF174Q15697 407 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 ARHGAP15Q53QZ3 475 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 FAM47CQ5HY64 1035 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 LRRC71Q8N4P6 559 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 DRAXINQ8NBI3 349 aaPredicted RBP4.11□□□□□ -1.75
SUB1-202ENST00000502453 CTNNBL1Q8WYA6 563 aaPredicted RBP4.11□□□□□ -1.75
SUB1-202ENST00000502453 RFFLQ8WZ73 363 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 EXOC4Q96A65 974 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 EAF2Q96CJ1 260 aaPredicted RBP4.11□□□□□ -1.75
SUB1-202ENST00000502453 LACRTQ9GZZ8 138 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 MMADHCQ9H3L0 296 aaPredicted RBP4.11□□□□□ -1.75
SUB1-202ENST00000502453 TAF1DQ9H5J8 278 aaPredicted RBP4.11□□□□□ -1.75
SUB1-202ENST00000502453 TRPV4Q9HBA0 871 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.11□□□□□ -1.75
SUB1-202ENST00000502453 CLIP2Q9UDT6 1046 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 LAMP5Q9UJQ1 280 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 FBXL21Q9UKT6 434 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 CFAP45Q9UL16 551 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 SCAF8Q9UPN6 1271 aaKnown RBP4.11□□□□□ -1.75
SUB1-202ENST00000502453 TRIM33Q9UPN9 1127 aa4.11□□□□□ -1.75
SUB1-202ENST00000502453 NOSIPQ9Y314 301 aaKnown RBP4.11□□□□□ -1.75
SUB1-202ENST00000502453 FLT1P17948 1338 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 NUDT19A8MXV4 375 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 PTGES3LE9PB15 166 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 E2F6O75461 281 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 CKMP06732 381 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 TMEM253P0C7T8 217 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 SERPINF1P36955 418 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 PRKAA2P54646 552 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 PAK1Q13153 545 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 TNIP1Q15025 636 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 OASLQ15646 514 aaKnown RBP4.1□□□□□ -1.75
SUB1-202ENST00000502453 ISLR2Q6UXK2 745 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 LBX2Q6XYB7 198 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 BEND5Q7L4P6 421 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 RIOX2Q8IUF8 465 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 ADGRG2Q8IZP9 1017 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 ZMIZ2Q8NF64 920 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 BAHD1Q8TBE0 780 aaPredicted RBP4.1□□□□□ -1.75
SUB1-202ENST00000502453 KCNJ15Q99712 375 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 LBHD1Q9BQE6 289 aaPredicted RBP4.1□□□□□ -1.75
SUB1-202ENST00000502453 CELF4Q9BZC1 486 aaKnown RBP4.1□□□□□ -1.75
SUB1-202ENST00000502453 SEPSECSQ9HD40 501 aaKnown RBP4.1□□□□□ -1.75
SUB1-202ENST00000502453 GPRC5CQ9NQ84 441 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 CAMK2AQ9UQM7 478 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 MAN2B2Q9Y2E5 1009 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 H3BUI4 141 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 TAF4O00268 1085 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 FOXD2O60548 495 aaPredicted RBP4.1□□□□□ -1.75
SUB1-202ENST00000502453 MSCO60682 206 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 UBOX5O94941 541 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 NDST3O95803 873 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 B3GALT4O96024 378 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 HSPA5P11021 654 aaKnown RBP4.1□□□□□ -1.75
SUB1-202ENST00000502453 ITGA4P13612 1032 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 CDK17Q00537 523 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 TLE2Q04725 743 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 C17orf67Q0P5P2 114 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 SCRN1Q12765 414 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 CCINQ13939 588 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 ZNF697Q5TEC3 545 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 ABRAXAS1Q6UWZ7 409 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 LIAT1Q6ZQX7 453 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 ANKRD35Q8N283 1001 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 GOLGA6L1Q8N7Z2 621 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 GDAP1Q8TB36 358 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 KAT5Q92993 513 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 CCDC43Q96MW1 224 aaKnown RBP4.1□□□□□ -1.75
SUB1-202ENST00000502453 PPP1R9BQ96SB3 815 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 POP1Q99575 1024 aaKnown RBP4.1□□□□□ -1.75
SUB1-202ENST00000502453 YIPF2Q9BWQ6 316 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 CD244Q9BZW8 370 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 LIN28AQ9H9Z2 209 aaKnown RBP4.1□□□□□ -1.75
SUB1-202ENST00000502453 MLXIPQ9HAP2 919 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 SPON1Q9HCB6 807 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 BARX2Q9UMQ3 279 aaPredicted RBP4.1□□□□□ -1.75
SUB1-202ENST00000502453 DUSP12Q9UNI6 340 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 TULP2O00295 520 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 TXNL1O43396 289 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 PLA2G6O60733 806 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 SNX4O95219 450 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 HMOX1P09601 288 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 CCNCP24863 283 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 MATR3P43243 847 aaKnown RBP eCLIP4.1□□□□□ -1.75
SUB1-202ENST00000502453 LRRC74AQ0VAA2 488 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 POU4F2Q12837 409 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 DAG1Q14118 895 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 ZSCAN26Q16670 478 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 C3orf36Q3SXR2 165 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 KRTCAP3Q53RY4 240 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 BRSK1Q8TDC3 778 aa4.1□□□□□ -1.75
SUB1-202ENST00000502453 BSNDQ8WZ55 320 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms