RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	SCLT1	Q96NL6	688 aa		13.24	□□□□□ -0.29
MATR3-231	ENST00000502394	ERGIC2	Q96RQ1	377 aa		13.24	□□□□□ -0.29
MATR3-231	ENST00000502394	NOC4L	Q9BVI4	516 aa	Known RBP	13.24	□□□□□ -0.29
MATR3-231	ENST00000502394	MCOLN1	Q9GZU1	580 aa		13.24	□□□□□ -0.29
MATR3-231	ENST00000502394	NDST4	Q9H3R1	872 aa		13.24	□□□□□ -0.29
MATR3-231	ENST00000502394	AGPAT5	Q9NUQ2	364 aa		13.24	□□□□□ -0.29
MATR3-231	ENST00000502394		A0A1W2PQC6	194 aa		13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	TFRC	P02786	760 aa	Known RBP	13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	MCF2	P10911	925 aa		13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	PRKCSH	P14314	528 aa	Predicted RBP	13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	SFPQ	P23246	707 aa	Known RBP eCLIP	13.23	□□□□□ -0.29	2e-6	■■□□□ 12.5
MATR3-231	ENST00000502394	AXL	P30530	894 aa		13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	POU5F1	Q01860	360 aa	Known RBP	13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	CYP24A1	Q07973	514 aa		13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	FILIP1L	Q4L180	1135 aa		13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	FBXO47	Q5MNV8	452 aa		13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	ZBTB41	Q5SVQ8	909 aa		13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	SLC39A5	Q6ZMH5	540 aa		13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	CATSPER4	Q7RTX7	472 aa		13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	ANKRD33	Q7Z3H0	272 aa		13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	BRSK2	Q8IWQ3	736 aa		13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	PARD3B	Q8TEW8	1205 aa		13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	DIS3L	Q8TF46	1054 aa	Known RBP	13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	ANP32B	Q92688	251 aa	Known RBP	13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	CPB2	Q96IY4	423 aa		13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	MSTO1	Q9BUK6	570 aa		13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	OSBPL7	Q9BZF2	842 aa		13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	ANKFY1	Q9P2R3	1169 aa		13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	CPSF3	Q9UKF6	684 aa	Known RBP	13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	GINS2	Q9Y248	185 aa		13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	NOC2L	Q9Y3T9	749 aa	Known RBP	13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	SQOR	Q9Y6N5	450 aa		13.23	□□□□□ -0.29
MATR3-231	ENST00000502394	ITIH6	Q6UXX5	1313 aa		13.22	□□□□□ -0.29
MATR3-231	ENST00000502394		M0QZ92	97 aa		13.22	□□□□□ -0.29
MATR3-231	ENST00000502394	PMM2	O15305	246 aa		13.22	□□□□□ -0.29
MATR3-231	ENST00000502394	ERLIN2	O94905	339 aa		13.22	□□□□□ -0.29
MATR3-231	ENST00000502394	TPM3	P06753	285 aa		13.22	□□□□□ -0.29
MATR3-231	ENST00000502394	CTSH	P09668	335 aa		13.22	□□□□□ -0.29
MATR3-231	ENST00000502394	CKB	P12277	381 aa		13.22	□□□□□ -0.29
MATR3-231	ENST00000502394	THPO	P40225	353 aa		13.22	□□□□□ -0.29
MATR3-231	ENST00000502394	WNT7B	P56706	349 aa		13.22	□□□□□ -0.29
MATR3-231	ENST00000502394	CLDN10	P78369	228 aa		13.22	□□□□□ -0.29
MATR3-231	ENST00000502394	KCNH2	Q12809	1159 aa		13.22	□□□□□ -0.29
MATR3-231	ENST00000502394	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.22	□□□□□ -0.29
MATR3-231	ENST00000502394	PSMD6	Q15008	389 aa		13.22	□□□□□ -0.29
MATR3-231	ENST00000502394	ZNF568	Q3ZCX4	644 aa		13.22	□□□□□ -0.29
MATR3-231	ENST00000502394	ZNF618	Q5T7W0	954 aa		13.22	□□□□□ -0.29
MATR3-231	ENST00000502394	CDR2L	Q86X02	465 aa	Predicted RBP	13.22	□□□□□ -0.29
MATR3-231	ENST00000502394	RDH13	Q8NBN7	331 aa		13.22	□□□□□ -0.29
MATR3-231	ENST00000502394	CAGE1	Q8TC20	777 aa		13.22	□□□□□ -0.29
MATR3-231	ENST00000502394	TOX2	Q96NM4	488 aa		13.22	□□□□□ -0.29
MATR3-231	ENST00000502394	FAM213A	Q9BRX8	229 aa		13.22	□□□□□ -0.29
MATR3-231	ENST00000502394	ERVK-5	Q9HDB9	667 aa		13.22	□□□□□ -0.29
MATR3-231	ENST00000502394	NOD1	Q9Y239	953 aa		13.22	□□□□□ -0.29
MATR3-231	ENST00000502394	SIK3	Q9Y2K2	1263 aa		13.22	□□□□□ -0.29
MATR3-231	ENST00000502394	KIAA0100	Q14667	2235 aa	Known RBP	13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	MROH7	Q68CQ1	1323 aa		13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	ZNF233	A6NK53	670 aa		13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	MEFV	O15553	781 aa	Predicted RBP	13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	AFP	P02771	609 aa	Known RBP	13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	TRIM49	P0CI25	452 aa		13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	TRIM49C	P0CI26	452 aa		13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	DEK	P35659	375 aa	Known RBP	13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	TNFSF9	P41273	254 aa		13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	ACOT2	P49753	483 aa		13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	VAMP7	P51809	220 aa		13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	DLG4	P78352	724 aa		13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	UBXN1	Q04323	297 aa		13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	KCNMA1	Q12791	1236 aa		13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	TBX2	Q13207	712 aa	Predicted RBP	13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	LPIN1	Q14693	890 aa		13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	MBTPS1	Q14703	1052 aa		13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	PTPN21	Q16825	1174 aa		13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	DCAF4L1	Q3SXM0	396 aa		13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	UBXN11	Q5T124	520 aa		13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	DPY19L2P1	Q6NXN4	242 aa		13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	NOTUM	Q6P988	496 aa		13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	ZBTB33	Q86T24	672 aa		13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	CREBRF	Q8IUR6	639 aa		13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	CEP120	Q8N960	986 aa		13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	CCDC51	Q96ER9	411 aa		13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	AGO3	Q9H9G7	860 aa	Known RBP	13.21	□□□□□ -0.29
MATR3-231	ENST00000502394	GTPBP10	A4D1E9	387 aa	Known RBP	13.2	□□□□□ -0.3
MATR3-231	ENST00000502394	RBAK-RBAKDN	I3L0D1	243 aa		13.2	□□□□□ -0.3
MATR3-231	ENST00000502394	RPS6KA5	O75582	802 aa		13.2	□□□□□ -0.3
MATR3-231	ENST00000502394	TPM2	P07951	284 aa		13.2	□□□□□ -0.3
MATR3-231	ENST00000502394	KRT13	P13646	458 aa		13.2	□□□□□ -0.3
MATR3-231	ENST00000502394	GRM5	P41594	1212 aa		13.2	□□□□□ -0.3
MATR3-231	ENST00000502394	FMO5	P49326	533 aa		13.2	□□□□□ -0.3
MATR3-231	ENST00000502394	PPP3CA	Q08209	521 aa		13.2	□□□□□ -0.3
MATR3-231	ENST00000502394	DSC3	Q14574	896 aa		13.2	□□□□□ -0.3
MATR3-231	ENST00000502394	ENOX2	Q16206	610 aa	Known RBP	13.2	□□□□□ -0.3
MATR3-231	ENST00000502394	KYAT1	Q16773	422 aa		13.2	□□□□□ -0.3
MATR3-231	ENST00000502394	SEZ6	Q53EL9	994 aa		13.2	□□□□□ -0.3
MATR3-231	ENST00000502394	SLC27A1	Q6PCB7	646 aa		13.2	□□□□□ -0.3
MATR3-231	ENST00000502394	UBE2Q1	Q7Z7E8	422 aa		13.2	□□□□□ -0.3
MATR3-231	ENST00000502394	TMEM192	Q8IY95	271 aa		13.2	□□□□□ -0.3
MATR3-231	ENST00000502394	CCDC155	Q8N6L0	562 aa		13.2	□□□□□ -0.3

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