RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 TYK2P29597 1187 aa11.78□□□□□ -0.52
AC055713.1-201ENST00000498967 ANKS6Q68DC2 871 aa11.78□□□□□ -0.52
AC055713.1-201ENST00000498967 TAB3Q8N5C8 712 aaPredicted RBP11.78□□□□□ -0.52
AC055713.1-201ENST00000498967 FAM192AQ9GZU8 254 aa11.78□□□□□ -0.52
AC055713.1-201ENST00000498967 BICRAQ9NZM4 1560 aa11.78□□□□□ -0.52
AC055713.1-201ENST00000498967 GOLGA8SH3BPF8 625 aa11.78□□□□□ -0.52
AC055713.1-201ENST00000498967 CLCC1Q96S66 551 aa11.78□□□□□ -0.52
AC055713.1-201ENST00000498967 HDHD2Q9H0R4 259 aa11.78□□□□□ -0.52
AC055713.1-201ENST00000498967 KLHL3Q9UH77 587 aa11.78□□□□□ -0.52
AC055713.1-201ENST00000498967 TMCC3Q9ULS5 477 aa11.78□□□□□ -0.52
AC055713.1-201ENST00000498967 TCOF1Q13428 1488 aaKnown RBP11.78□□□□□ -0.52
AC055713.1-201ENST00000498967 GGPS1O95749 300 aa11.77□□□□□ -0.52
AC055713.1-201ENST00000498967 LDHAP00338 332 aaKnown RBP11.77□□□□□ -0.52
AC055713.1-201ENST00000498967 GCLCP48506 637 aaPredicted RBP11.77□□□□□ -0.52
AC055713.1-201ENST00000498967 CNTN1Q12860 1018 aa11.77□□□□□ -0.52
AC055713.1-201ENST00000498967 SUZ12Q15022 739 aaKnown RBP11.77□□□□□ -0.52
AC055713.1-201ENST00000498967 ULK3Q6PHR2 472 aa11.77□□□□□ -0.52
AC055713.1-201ENST00000498967 PALB2Q86YC2 1186 aa11.77□□□□□ -0.52
AC055713.1-201ENST00000498967 SARS2Q9NP81 518 aaKnown RBP11.77□□□□□ -0.52
AC055713.1-201ENST00000498967 ABCC12Q96J65 1359 aa11.77□□□□□ -0.52
AC055713.1-201ENST00000498967 ABCC1P33527 1531 aa11.77□□□□□ -0.52
AC055713.1-201ENST00000498967 TSC22D2O75157 780 aa11.77□□□□□ -0.52
AC055713.1-201ENST00000498967 YWHAZP63104 245 aaKnown RBP11.77□□□□□ -0.52
AC055713.1-201ENST00000498967 TRAP1Q12931 704 aaKnown RBP11.77□□□□□ -0.52
AC055713.1-201ENST00000498967 HEATR6Q6AI08 1181 aaKnown RBP11.77□□□□□ -0.52
AC055713.1-201ENST00000498967 OR6P1Q8NGX9 317 aa11.77□□□□□ -0.52
AC055713.1-201ENST00000498967 MAGED4Q96JG8 741 aa11.77□□□□□ -0.52
AC055713.1-201ENST00000498967 SAYSD1Q9NPB0 183 aa11.77□□□□□ -0.52
AC055713.1-201ENST00000498967 CCDC88CQ9P219 2028 aa11.77□□□□□ -0.52
AC055713.1-201ENST00000498967 A8MXQ7 604 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 GNAT1P11488 350 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 THOC1Q96FV9 657 aaKnown RBP11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 SH3BP4Q9P0V3 963 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 GPAA1O43292 621 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 CCND1P24385 295 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 PPP2R2AP63151 447 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 DDB1Q16531 1140 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 OR8H2Q8N162 312 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 ZBTB38Q8NAP3 1195 aaPredicted RBP11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 C19orf44Q9H6X5 657 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 RWDD2AQ9UIY3 292 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 CDY2AQ9Y6F7 541 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 CDY1Q9Y6F8 540 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 PI4K2BG5E9Z4 385 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 CHMLP26374 656 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 ADCY1Q08828 1119 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 RPF1Q9H9Y2 349 aaKnown RBP11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 TAP1Q03518 808 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 C8orf34Q49A92 452 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 DPY19L2Q6NUT2 758 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 CDC73Q6P1J9 531 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 CYP4Z1Q86W10 505 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 CDCA7Q9BWT1 371 aaPredicted RBP11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 PLEKHA5Q9HAU0 1116 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 ECE2O60344 883 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 CMA1P23946 247 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 RXRGP48443 463 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 CHRNA2Q15822 529 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 MACC1Q6ZN28 852 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 GJA10Q969M2 543 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 TOPORSQ9NS56 1045 aaPredicted RBP11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 SYCP2Q9BX26 1530 aa11.77□□□□□ -0.53
AC055713.1-201ENST00000498967 ACADSP16219 412 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 HDLBPQ00341 1268 aaKnown RBP11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 PNOCQ13519 176 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 USP44Q9H0E7 712 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 KIAA1586Q9HCI6 787 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 SEPT9Q9UHD8 586 aaPredicted RBP11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 HERC5Q9UII4 1024 aaKnown RBP11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 HEATR1Q9H583 2144 aaKnown RBP11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 TOM1O60784 492 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 MTHFSDQ2M296 383 aaKnown RBP11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 PLEKHM2Q8IWE5 1019 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 RNPEPQ9H4A4 650 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 DNAJC12Q9UKB3 198 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 MAGED2Q9UNF1 606 aaPredicted RBP11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 DOLKQ9UPQ8 538 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 PCDH11XQ9BZA7 1347 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 PCDH11YQ9BZA8 1340 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 TLR2O60603 784 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 ALDH1B1P30837 517 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 MCCD1P59942 119 aaPredicted RBP11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 SFSWAPQ12872 951 aaKnown RBP11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 NIM1KQ8IY84 436 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 CLMNQ96JQ2 1002 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 SP110Q9HB58 689 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 TRPM5Q9NZQ8 1165 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 ARID1BQ8NFD5 2236 aaPredicted RBP11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 BNIP3LO60238 219 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 TMEM154Q6P9G4 183 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 RIC8BQ9NVN3 520 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 TFCP2L1Q9NZI6 479 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 ZFATQ9P243 1243 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 DKK3Q9UBP4 350 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 DCTN4Q9UJW0 460 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 PA2G4Q9UQ80 394 aaKnown RBP11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 KIAA0100Q14667 2235 aaKnown RBP11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 A0A0X1KG70 313 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 CFAP69A5D8W1 941 aa11.76□□□□□ -0.53
AC055713.1-201ENST00000498967 USP1O94782 785 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms