RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	ADPGK	Q9BRR6	497 aa		11.78	□□□□□ -0.52
CDK11A-222	ENST00000498810	C1QTNF2	Q9BXJ5	285 aa		11.78	□□□□□ -0.52
CDK11A-222	ENST00000498810	KLF16	Q9BXK1	252 aa	Predicted RBP	11.78	□□□□□ -0.52
CDK11A-222	ENST00000498810	NT5C3A	Q9H0P0	336 aa		11.78	□□□□□ -0.52
CDK11A-222	ENST00000498810	UBN1	Q9NPG3	1134 aa		11.78	□□□□□ -0.52
CDK11A-222	ENST00000498810	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.78	□□□□□ -0.52
CDK11A-222	ENST00000498810	SPG21	Q9NZD8	308 aa		11.78	□□□□□ -0.52
CDK11A-222	ENST00000498810	REV3L	O60673	3130 aa		11.77	□□□□□ -0.52
CDK11A-222	ENST00000498810	FSD2	A1L4K1	749 aa		11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	CCDC169	A6NNP5	214 aa		11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810		H3BQ06	376 aa	Predicted RBP	11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	NPTXR	O95502	500 aa		11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	PRKCB	P05771	671 aa		11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	LINC00271	P0C7V0	271 aa		11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	ATF7	P17544	494 aa	Predicted RBP	11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	CYP11B2	P19099	503 aa		11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	NRIP1	P48552	1158 aa		11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	MBTD1	Q05BQ5	628 aa		11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	DMP1	Q13316	513 aa	Predicted RBP	11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	CLUL1	Q15846	466 aa		11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	MAPK6	Q16659	721 aa		11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	SLC27A1	Q6PCB7	646 aa		11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	TREML4	Q6UXN2	200 aa		11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	TMC7	Q7Z402	723 aa		11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	TRIM46	Q7Z4K8	759 aa		11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	SPPL3	Q8TCT6	385 aa		11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	LRRN4	Q8WUT4	740 aa		11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	MRPS27	Q92552	414 aa	Known RBP	11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	CALML4	Q96GE6	196 aa		11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	DRC1	Q96MC2	740 aa		11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	TCF25	Q9BQ70	676 aa		11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	TRAIP	Q9BWF2	469 aa		11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	CSRNP2	Q9H175	543 aa		11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	CWH43	Q9H720	699 aa		11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810	TLE6	Q9H808	572 aa		11.77	□□□□□ -0.53
CDK11A-222	ENST00000498810		E9PMD0	336 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	N4BP3	O15049	544 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	EYA4	O95677	639 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	CDC25A	P30304	524 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	TXLNA	P40222	546 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	MLH1	P40692	756 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	UBA7	P41226	1012 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	NAMPT	P43490	491 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	BCAR1	P56945	870 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	POU5F1B	Q06416	359 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	HYAL1	Q12794	435 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	PRPF4B	Q13523	1007 aa	Known RBP	11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	CUL4A	Q13619	759 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	AGER	Q15109	404 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	PDE12	Q6L8Q7	609 aa	Known RBP	11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	CABP7	Q86V35	215 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	C4orf32	Q8N8J7	132 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	PRIMPOL	Q96LW4	560 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	PLIN2	Q99541	437 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	NFKBIZ	Q9BYH8	718 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	RNF19A	Q9NV58	838 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	TBC1D13	Q9NVG8	400 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	KANSL3	Q9P2N6	904 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	PARP2	Q9UGN5	583 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	IPP	Q9Y573	584 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	CIT	O14578	2027 aa		11.76	□□□□□ -0.53
CDK11A-222	ENST00000498810	NT5C1B-RDH14	C9J2C7	533 aa		11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	B4GALT5	O43286	388 aa		11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	ZNF623	O75123	536 aa		11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	HIP1R	O75146	1068 aa		11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	POMC	P01189	267 aa		11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	KRT18	P05783	430 aa	Known RBP	11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	ARF4	P18085	180 aa	Predicted RBP	11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	NCL	P19338	710 aa	Known RBP	11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	IRS1	P35568	1242 aa		11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	GRM5	P41594	1212 aa		11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	EFNA5	P52803	228 aa		11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	RAD51AP2	Q09MP3	1159 aa		11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	SMC1A	Q14683	1233 aa	Known RBP	11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	LEXM	Q3ZCV2	418 aa		11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	LRRC55	Q6ZSA7	311 aa		11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	CDR2L	Q86X02	465 aa	Predicted RBP	11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	INTS4	Q96HW7	963 aa	Known RBP	11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	AK8	Q96MA6	479 aa		11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	KIFC3	Q9BVG8	833 aa		11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	EIF2A	Q9BY44	585 aa	Known RBP	11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	NXF3	Q9H4D5	531 aa	Known RBP	11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	LZTS1	Q9Y250	596 aa		11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	PCDHGC5	Q9Y5F6	944 aa		11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	PHLPP2	Q6ZVD8	1323 aa		11.75	□□□□□ -0.53
CDK11A-222	ENST00000498810	TRIP11	Q15643	1979 aa		11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	MEIS3P2	A8K0S8	358 aa		11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	OFD1	O75665	1012 aa		11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	BMP1	P13497	986 aa		11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	TIMP2	P16035	220 aa		11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	DNAJB1	P25685	340 aa		11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	OR1G1	P47890	313 aa		11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	PEX3	P56589	373 aa		11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	PLCB3	Q01970	1234 aa		11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	CEBPZ	Q03701	1054 aa	Known RBP	11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	DHX8	Q14562	1220 aa	Known RBP	11.74	□□□□□ -0.53
CDK11A-222	ENST00000498810	SF3A1	Q15459	793 aa	Known RBP	11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms