RNA–Protein interactions for RNA: ENST00000498761.5

ARHGEF9-208, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 2

Gene ARHGEF9, Length 515 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-208	ENST00000498761	TBR1	Q16650	682 aa		5.22	□□□□□ -1.57
ARHGEF9-208	ENST00000498761	ZNF568	Q3ZCX4	644 aa		5.22	□□□□□ -1.57
ARHGEF9-208	ENST00000498761	MCM10	Q7L590	875 aa		5.22	□□□□□ -1.57
ARHGEF9-208	ENST00000498761	REXO1L1P	Q8IX06	675 aa		5.22	□□□□□ -1.57
ARHGEF9-208	ENST00000498761	SLC43A3	Q8NBI5	491 aa		5.22	□□□□□ -1.57
ARHGEF9-208	ENST00000498761	KCTD13	Q8WZ19	329 aa		5.22	□□□□□ -1.57
ARHGEF9-208	ENST00000498761	DCPS	Q96C86	337 aa	Known RBP	5.22	□□□□□ -1.57
ARHGEF9-208	ENST00000498761	NYX	Q9GZU5	481 aa		5.22	□□□□□ -1.57
ARHGEF9-208	ENST00000498761	VPS33B	Q9H267	617 aa		5.22	□□□□□ -1.57
ARHGEF9-208	ENST00000498761	C12orf65	Q9H3J6	166 aa	Known RBP	5.22	□□□□□ -1.57
ARHGEF9-208	ENST00000498761	DBNDD1	Q9H9R9	158 aa		5.22	□□□□□ -1.57
ARHGEF9-208	ENST00000498761	GPR27	Q9NS67	375 aa		5.22	□□□□□ -1.57
ARHGEF9-208	ENST00000498761	MIS18A	Q9NYP9	233 aa		5.22	□□□□□ -1.57
ARHGEF9-208	ENST00000498761	GGA3	Q9NZ52	723 aa		5.22	□□□□□ -1.57
ARHGEF9-208	ENST00000498761	HECA	Q9UBI9	543 aa	Predicted RBP	5.22	□□□□□ -1.57
ARHGEF9-208	ENST00000498761	RANBP2	P49792	3224 aa	Known RBP	5.22	□□□□□ -1.57
ARHGEF9-208	ENST00000498761	MAP3K15	Q6ZN16	1313 aa		5.22	□□□□□ -1.57
ARHGEF9-208	ENST00000498761	ERVV-1	B6SEH8	477 aa		5.21	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	PRODH	O43272	600 aa		5.21	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	COL6A2	P12110	1019 aa		5.21	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	HIBADH	P31937	336 aa	Known RBP	5.21	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	MSX2	P35548	267 aa	Predicted RBP	5.21	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	CD276	Q5ZPR3	534 aa		5.21	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	ZNF34	Q8IZ26	560 aa		5.21	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	SLC17A8	Q8NDX2	589 aa		5.21	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	SUPT20H	Q8NEM7	779 aa		5.21	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	PHOSPHO1	Q8TCT1	267 aa		5.21	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	DPF2	Q92785	391 aa		5.21	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	FAM89A	Q96GI7	184 aa		5.21	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	CEP72	Q9P209	647 aa		5.21	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	RRP7A	Q9Y3A4	280 aa	Known RBP	5.21	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	CEP290	O15078	2479 aa		5.21	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	SIPA1L3	O60292	1781 aa	Predicted RBP	5.21	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	COL6A3	P12111	3177 aa		5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	ESYT3	A0FGR9	886 aa		5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761		H0YGN5	161 aa		5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	NKRF	O15226	690 aa	Known RBP eCLIP	5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	BBOX1	O75936	387 aa		5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	CHGB	P05060	677 aa		5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	PABPC1	P11940	636 aa	Known RBP	5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	MYL6B	P14649	208 aa		5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	GJA4	P35212	333 aa		5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	TM4SF4	P48230	202 aa		5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	RBM25	P49756	843 aa	Known RBP	5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	ATXN1	P54253	815 aa	Known RBP	5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	CNGB1	Q14028	1251 aa	Predicted RBP	5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	RAB33A	Q14088	237 aa		5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	PAN2	Q504Q3	1202 aa	Known RBP	5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	SLC10A5	Q5PT55	438 aa		5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	LRCH2	Q5VUJ6	765 aa		5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	LBX2	Q6XYB7	198 aa		5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	SPATC1	Q76KD6	591 aa		5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	OTOP1	Q7RTM1	612 aa		5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	TTLL11	Q8NHH1	800 aa		5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	AARSD1	Q9BTE6	412 aa	Known RBP	5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	TMX4	Q9H1E5	349 aa	Predicted RBP	5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	POLL	Q9UGP5	575 aa		5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	KNSTRN	Q9Y448	316 aa		5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	TRIM17	Q9Y577	477 aa		5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	KIAA0100	Q14667	2235 aa	Known RBP	5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	DUOX1	Q9NRD9	1551 aa		5.2	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	IBTK	Q9P2D0	1353 aa	Predicted RBP	5.19	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	AKAP11	Q9UKA4	1901 aa		5.19	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	POLR2A	P24928	1970 aa	Known RBP	5.19	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	TCRBV5S4A2T	A0A5A2	114 aa		5.19	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	ADCY3	O60266	1144 aa		5.19	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	ECE2	O60344	883 aa		5.19	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	HSPA5	P11021	654 aa	Known RBP	5.19	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	FGFR1	P11362	822 aa		5.19	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	PDE6A	P16499	860 aa		5.19	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	FAH	P16930	419 aa		5.19	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	PRKAR2B	P31323	418 aa		5.19	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	TUSC3	Q13454	348 aa		5.19	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	CC2D1B	Q5T0F9	858 aa	Known RBP	5.19	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	FOXB2	Q5VYV0	432 aa		5.19	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	OTOP3	Q7RTS5	596 aa		5.19	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	SGSM3	Q96HU1	749 aa		5.19	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	THUMPD2	Q9BTF0	503 aa	Known RBP	5.19	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	KIAA1683	Q9H0B3	1180 aa		5.19	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	SLC6A20	Q9NP91	592 aa		5.19	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	NR2E1	Q9Y466	385 aa		5.19	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	COL3A1	P02461	1466 aa	Predicted RBP	5.19	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	ANXA1	P04083	346 aa		5.18	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	GRK2	P25098	689 aa		5.18	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	RPS12	P25398	132 aa	Known RBP	5.18	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	GRK3	P35626	688 aa		5.18	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	GPSM2	P81274	684 aa		5.18	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	TOP3A	Q13472	1001 aa	Predicted RBP	5.18	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	GRAP	Q13588	217 aa		5.18	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	PRKG1	Q13976	671 aa		5.18	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	HSP90AA2P	Q14568	343 aa	Predicted RBP	5.18	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	KIF6	Q6ZMV9	814 aa		5.18	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	PPP1R42	Q7Z4L9	355 aa		5.18	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	GLCCI1	Q86VQ1	547 aa		5.18	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	RPUSD2	Q8IZ73	545 aa	Known RBP	5.18	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	UHMK1	Q8TAS1	419 aa	Known RBP	5.18	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	GRAPL	Q8TC17	118 aa	Predicted RBP	5.18	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	SH3RF2	Q8TEC5	729 aa		5.18	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	CELF1	Q92879	486 aa	Known RBP	5.18	□□□□□ -1.58
ARHGEF9-208	ENST00000498761	KCNJ15	Q99712	375 aa		5.18	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms