RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 CASKIN2Q8WXE0 1202 aa6.31□□□□□ -1.4
SSR3-209ENST00000498205 ASPSCR1Q9BZE9 553 aa6.31□□□□□ -1.4
SSR3-209ENST00000498205 TMEM140Q9NV12 185 aa6.31□□□□□ -1.4
SSR3-209ENST00000498205 FHAD1B1AJZ9 1412 aa6.31□□□□□ -1.4
SSR3-209ENST00000498205 ARHGAP35Q9NRY4 1499 aa6.3□□□□□ -1.4
SSR3-209ENST00000498205 CC2D2AQ9P2K1 1620 aa6.3□□□□□ -1.4
SSR3-209ENST00000498205 DIRC3C9JPN6 131 aa6.3□□□□□ -1.4
SSR3-209ENST00000498205 XPOTO43592 962 aaKnown RBP6.3□□□□□ -1.4
SSR3-209ENST00000498205 NDUFS2O75306 463 aa6.3□□□□□ -1.4
SSR3-209ENST00000498205 RECQL4O94761 1208 aa6.3□□□□□ -1.4
SSR3-209ENST00000498205 SNRPA1P09661 255 aaKnown RBP6.3□□□□□ -1.4
SSR3-209ENST00000498205 INSRRP14616 1297 aa6.3□□□□□ -1.4
SSR3-209ENST00000498205 ADSLP30566 484 aaPredicted RBP6.3□□□□□ -1.4
SSR3-209ENST00000498205 RABGGTBP53611 331 aa6.3□□□□□ -1.4
SSR3-209ENST00000498205 ACAP2Q15057 778 aa6.3□□□□□ -1.4
SSR3-209ENST00000498205 NOMO1Q15155 1222 aa6.3□□□□□ -1.4
SSR3-209ENST00000498205 ATP2B3Q16720 1220 aa6.3□□□□□ -1.4
SSR3-209ENST00000498205 PTPN21Q16825 1174 aa6.3□□□□□ -1.4
SSR3-209ENST00000498205 ABCB5Q2M3G0 1257 aa6.3□□□□□ -1.4
SSR3-209ENST00000498205 EFCAB2Q5VUJ9 269 aa6.3□□□□□ -1.4
SSR3-209ENST00000498205 PPP4R3AQ6IN85 833 aa6.3□□□□□ -1.4
SSR3-209ENST00000498205 ELOA2Q8IYF1 753 aaPredicted RBP6.3□□□□□ -1.4
SSR3-209ENST00000498205 OR52N2Q8NGI0 321 aa6.3□□□□□ -1.4
SSR3-209ENST00000498205 ZFP28Q8NHY6 868 aa6.3□□□□□ -1.4
SSR3-209ENST00000498205 JADE3Q92613 823 aa6.3□□□□□ -1.4
SSR3-209ENST00000498205 HOXB13Q92826 284 aaPredicted RBP6.3□□□□□ -1.4
SSR3-209ENST00000498205 MNTQ99583 582 aa6.3□□□□□ -1.4
SSR3-209ENST00000498205 C7orf25Q9BPX7 421 aa6.3□□□□□ -1.4
SSR3-209ENST00000498205 DNM3Q9UQ16 869 aa6.3□□□□□ -1.4
SSR3-209ENST00000498205 XDHP47989 1333 aa6.29□□□□□ -1.4
SSR3-209ENST00000498205 TBKBP1A7MCY6 615 aa6.29□□□□□ -1.4
SSR3-209ENST00000498205 VCAM1P19320 739 aa6.29□□□□□ -1.4
SSR3-209ENST00000498205 PTPN7P35236 360 aa6.29□□□□□ -1.4
SSR3-209ENST00000498205 RECQLP46063 649 aaPredicted RBP6.29□□□□□ -1.4
SSR3-209ENST00000498205 EVA1CP58658 441 aa6.29□□□□□ -1.4
SSR3-209ENST00000498205 PPP3CAQ08209 521 aa6.29□□□□□ -1.4
SSR3-209ENST00000498205 VPS72Q15906 364 aa6.29□□□□□ -1.4
SSR3-209ENST00000498205 NRN1LQ496H8 165 aa6.29□□□□□ -1.4
SSR3-209ENST00000498205 BRDTQ58F21 947 aaPredicted RBP6.29□□□□□ -1.4
SSR3-209ENST00000498205 RRP12Q5JTH9 1297 aaKnown RBP6.29□□□□□ -1.4
SSR3-209ENST00000498205 PRAMEF14Q5SWL7 426 aa6.29□□□□□ -1.4
SSR3-209ENST00000498205 Q6ZVL8 140 aa6.29□□□□□ -1.4
SSR3-209ENST00000498205 PQLC1Q8N2U9 271 aa6.29□□□□□ -1.4
SSR3-209ENST00000498205 MDM1Q8TC05 714 aa6.29□□□□□ -1.4
SSR3-209ENST00000498205 HDAC10Q969S8 669 aa6.29□□□□□ -1.4
SSR3-209ENST00000498205 CHMP4CQ96CF2 233 aa6.29□□□□□ -1.4
SSR3-209ENST00000498205 DCLRE1CQ96SD1 692 aaKnown RBP6.29□□□□□ -1.4
SSR3-209ENST00000498205 SENP6Q9GZR1 1112 aaPredicted RBP6.29□□□□□ -1.4
SSR3-209ENST00000498205 CCDC8Q9H0W5 538 aaPredicted RBP6.29□□□□□ -1.4
SSR3-209ENST00000498205 CUL7Q14999 1698 aa6.29□□□□□ -1.4
SSR3-209ENST00000498205 ABCA10Q8WWZ4 1543 aa6.29□□□□□ -1.4
SSR3-209ENST00000498205 DNMBPQ6XZF7 1577 aa6.28□□□□□ -1.4
SSR3-209ENST00000498205 KLRG2A4D1S0 409 aaPredicted RBP6.28□□□□□ -1.4
SSR3-209ENST00000498205 TRIM24O15164 1050 aa6.28□□□□□ -1.4
SSR3-209ENST00000498205 STC2O76061 302 aa6.28□□□□□ -1.4
SSR3-209ENST00000498205 SNUPNO95149 360 aaKnown RBP6.28□□□□□ -1.4
SSR3-209ENST00000498205 SREBF1P36956 1147 aa6.28□□□□□ -1.4
SSR3-209ENST00000498205 ADKP55263 362 aaKnown RBP6.28□□□□□ -1.4
SSR3-209ENST00000498205 BMT2Q1RMZ1 405 aa6.28□□□□□ -1.4
SSR3-209ENST00000498205 MIIPQ5JXC2 388 aa6.28□□□□□ -1.4
SSR3-209ENST00000498205 GPRIN1Q7Z2K8 1008 aa6.28□□□□□ -1.4
SSR3-209ENST00000498205 TRMT2AQ8IZ69 625 aaKnown RBP6.28□□□□□ -1.4
SSR3-209ENST00000498205 RPUSD2Q8IZ73 545 aaKnown RBP6.28□□□□□ -1.4
SSR3-209ENST00000498205 MB21D1Q8N884 522 aa6.28□□□□□ -1.4
SSR3-209ENST00000498205 TEKT5Q96M29 485 aa6.28□□□□□ -1.4
SSR3-209ENST00000498205 CSRNP2Q9H175 543 aa6.28□□□□□ -1.4
SSR3-209ENST00000498205 FAM30AQ9NZY2 134 aa6.28□□□□□ -1.4
SSR3-209ENST00000498205 TNKSO95271 1327 aa6.27□□□□□ -1.41
SSR3-209ENST00000498205 TIAM1Q13009 1591 aa6.27□□□□□ -1.41
SSR3-209ENST00000498205 E2F8A0AVK6 867 aa6.27□□□□□ -1.41
SSR3-209ENST00000498205 FZD9O00144 591 aa6.27□□□□□ -1.41
SSR3-209ENST00000498205 SGTAO43765 313 aa6.27□□□□□ -1.41
SSR3-209ENST00000498205 GUCY1A2P33402 732 aa6.27□□□□□ -1.41
SSR3-209ENST00000498205 CLRN1P58418 232 aa6.27□□□□□ -1.41
SSR3-209ENST00000498205 KRTAP10-2P60368 255 aa6.27□□□□□ -1.41
SSR3-209ENST00000498205 FOXE3Q13461 319 aa6.27□□□□□ -1.41
SSR3-209ENST00000498205 PUM1Q14671 1186 aaKnown RBP eCLIP6.27□□□□□ -1.41
SSR3-209ENST00000498205 FAM214AQ32MH5 1076 aa6.27□□□□□ -1.41
SSR3-209ENST00000498205 TMEM240Q5SV17 173 aa6.27□□□□□ -1.41
SSR3-209ENST00000498205 EFCAB12Q6NXP0 572 aa6.27□□□□□ -1.41
SSR3-209ENST00000498205 Q6ZRM9 215 aa6.27□□□□□ -1.41
SSR3-209ENST00000498205 ZBTB46Q86UZ6 589 aa6.27□□□□□ -1.41
SSR3-209ENST00000498205 DRC7Q8IY82 874 aa6.27□□□□□ -1.41
SSR3-209ENST00000498205 IL17DQ8TAD2 202 aa6.27□□□□□ -1.41
SSR3-209ENST00000498205 EXTL1Q92935 676 aa6.27□□□□□ -1.41
SSR3-209ENST00000498205 PLEKHG4BQ96PX9 1271 aa6.27□□□□□ -1.41
SSR3-209ENST00000498205 LSM14BQ9BX40 385 aaKnown RBP6.27□□□□□ -1.41
SSR3-209ENST00000498205 DMRT3Q9NQL9 472 aa6.27□□□□□ -1.41
SSR3-209ENST00000498205 ZMYM3Q14202 1370 aa6.27□□□□□ -1.41
SSR3-209ENST00000498205 DHX57Q6P158 1386 aaKnown RBP6.27□□□□□ -1.41
SSR3-209ENST00000498205 CCNB3Q8WWL7 1395 aa6.27□□□□□ -1.41
SSR3-209ENST00000498205 THOC2Q8NI27 1593 aaKnown RBP6.27□□□□□ -1.41
SSR3-209ENST00000498205 CFAP43Q8NDM7 1665 aa6.26□□□□□ -1.41
SSR3-209ENST00000498205 MATN3O15232 486 aa6.26□□□□□ -1.41
SSR3-209ENST00000498205 ADCY6O43306 1168 aa6.26□□□□□ -1.41
SSR3-209ENST00000498205 PDGFRBP09619 1106 aa6.26□□□□□ -1.41
SSR3-209ENST00000498205 ALOX15P16050 662 aaPredicted RBP6.26□□□□□ -1.41
SSR3-209ENST00000498205 TNFRSF1AP19438 455 aa6.26□□□□□ -1.41
SSR3-209ENST00000498205 SCNN1GP51170 649 aa6.26□□□□□ -1.41
SSR3-209ENST00000498205 NEK2P51955 445 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms