RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 MRPL17Q9NRX2 175 aaKnown RBP16.84■□□□□ 0.29
NUP50-219ENST00000497960 MARCH5Q9NX47 278 aa16.84■□□□□ 0.29
NUP50-219ENST00000497960 TFIP11Q9UBB9 837 aaKnown RBP16.84■□□□□ 0.29
NUP50-219ENST00000497960 CFAP45Q9UL16 551 aa16.84■□□□□ 0.29
NUP50-219ENST00000497960 SSX2IPQ9Y2D8 614 aa16.84■□□□□ 0.29
NUP50-219ENST00000497960 USP15Q9Y4E8 981 aaPredicted RBP16.84■□□□□ 0.29
NUP50-219ENST00000497960 HCFC2Q9Y5Z7 792 aa16.84■□□□□ 0.29
NUP50-219ENST00000497960 YEATS4O95619 227 aa16.83■□□□□ 0.28
NUP50-219ENST00000497960 SOD2P04179 222 aa16.83■□□□□ 0.28
NUP50-219ENST00000497960 URODP06132 367 aa16.83■□□□□ 0.28
NUP50-219ENST00000497960 PLCG1P19174 1290 aa16.83■□□□□ 0.28
NUP50-219ENST00000497960 MARCKSP29966 332 aaPredicted RBP16.83■□□□□ 0.28
NUP50-219ENST00000497960 GRIN1Q05586 938 aa16.83■□□□□ 0.28
NUP50-219ENST00000497960 STRN3Q13033 797 aa16.83■□□□□ 0.28
NUP50-219ENST00000497960 TUSC3Q13454 348 aa16.83■□□□□ 0.28
NUP50-219ENST00000497960 DHX8Q14562 1220 aaKnown RBP16.83■□□□□ 0.28
NUP50-219ENST00000497960 KARSQ15046 597 aaKnown RBP16.83■□□□□ 0.28
NUP50-219ENST00000497960 PTPN14Q15678 1187 aa16.83■□□□□ 0.28
NUP50-219ENST00000497960 TPRNQ4KMQ1 711 aa16.83■□□□□ 0.28
NUP50-219ENST00000497960 PPFIBP1Q86W92 1011 aa16.83■□□□□ 0.28
NUP50-219ENST00000497960 GPBP1Q86WP2 473 aa16.83■□□□□ 0.28
NUP50-219ENST00000497960 ACO2Q99798 780 aaKnown RBP16.83■□□□□ 0.28
NUP50-219ENST00000497960 NTPCRQ9BSD7 190 aaKnown RBP16.83■□□□□ 0.28
NUP50-219ENST00000497960 TCHPQ9BT92 498 aa16.83■□□□□ 0.28
NUP50-219ENST00000497960 HERC2P3Q9BVR0 1158 aa16.83■□□□□ 0.28
NUP50-219ENST00000497960 CCSER1Q9C0I3 900 aa16.83■□□□□ 0.28
NUP50-219ENST00000497960 LARSQ9P2J5 1176 aaKnown RBP16.83■□□□□ 0.28
NUP50-219ENST00000497960 GDAQ9Y2T3 454 aa16.83■□□□□ 0.28
NUP50-219ENST00000497960 H0YCG3 227 aa16.82■□□□□ 0.28
NUP50-219ENST00000497960 SPTLC2O15270 562 aa16.82■□□□□ 0.28
NUP50-219ENST00000497960 KRT18P05783 430 aaKnown RBP16.82■□□□□ 0.28
NUP50-219ENST00000497960 THP07101 528 aa16.82■□□□□ 0.28
NUP50-219ENST00000497960 SLC39A14Q15043 492 aa16.82■□□□□ 0.28
NUP50-219ENST00000497960 ZNF568Q3ZCX4 644 aa16.82■□□□□ 0.28
NUP50-219ENST00000497960 KIAA1841Q6NSI8 718 aa16.82■□□□□ 0.28
NUP50-219ENST00000497960 SYCE2Q6PIF2 218 aa16.82■□□□□ 0.28
NUP50-219ENST00000497960 LINC00301Q8NCQ3 95 aa16.82■□□□□ 0.28
NUP50-219ENST00000497960 RAD54LQ92698 747 aa16.82■□□□□ 0.28
NUP50-219ENST00000497960 CCDC94Q9BW85 323 aaPredicted RBP16.82■□□□□ 0.28
NUP50-219ENST00000497960 TARS2Q9BW92 718 aaKnown RBP16.82■□□□□ 0.28
NUP50-219ENST00000497960 C1QTNF1Q9BXJ1 281 aa16.82■□□□□ 0.28
NUP50-219ENST00000497960 CCDC39Q9UFE4 941 aa16.82■□□□□ 0.28
NUP50-219ENST00000497960 ODF2LQ9ULJ1 636 aa16.82■□□□□ 0.28
NUP50-219ENST00000497960 SRPRBQ9Y5M8 271 aaKnown RBP16.82■□□□□ 0.28
NUP50-219ENST00000497960 TDRD15B5MCY1 1934 aaKnown RBP16.82■□□□□ 0.28
NUP50-219ENST00000497960 NPHP3-ACAD11A0A0J9YXS1 232 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 C19orf67A6NJJ6 358 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 C2CD2LO14523 706 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 TADA2AO75478 443 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 FAM13AO94988 1023 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 KLRC2P26717 231 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 TXLNAP40222 546 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 GLUD2P49448 558 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 YARSP54577 528 aaKnown RBP16.81■□□□□ 0.28
NUP50-219ENST00000497960 CACNB1Q02641 598 aaPredicted RBP16.81■□□□□ 0.28
NUP50-219ENST00000497960 MCM6Q14566 821 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 ARSHQ5FYA8 562 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 CES5AQ6NT32 575 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 TAS1R3Q7RTX0 852 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 TMEM161BQ8NDZ6 487 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 KCNG4Q8TDN1 519 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 CHAMP1Q96JM3 812 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 SPATA32Q96LK8 384 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 KLHL5Q96PQ7 755 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 APOL5Q9BWW9 433 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 PHF7Q9BWX1 381 aaPredicted RBP16.81■□□□□ 0.28
NUP50-219ENST00000497960 CDT1Q9H211 546 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 S1PR5Q9H228 398 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 EPHX3Q9H6B9 360 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 BLOC1S4Q9NUP1 217 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 DZANK1Q9NVP4 752 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 FBXO2Q9UK22 296 aaPredicted RBP16.81■□□□□ 0.28
NUP50-219ENST00000497960 ADAM28Q9UKQ2 775 aa16.81■□□□□ 0.28
NUP50-219ENST00000497960 CASTOR2A6NHX0 329 aa16.8■□□□□ 0.28
NUP50-219ENST00000497960 PTGESO14684 152 aa16.8■□□□□ 0.28
NUP50-219ENST00000497960 CNPP09543 421 aaKnown RBP16.8■□□□□ 0.28
NUP50-219ENST00000497960 MAPTP10636 758 aaKnown RBP16.8■□□□□ 0.28
NUP50-219ENST00000497960 MCF2P10911 925 aa16.8■□□□□ 0.28
NUP50-219ENST00000497960 ALADP13716 330 aa16.8■□□□□ 0.28
NUP50-219ENST00000497960 GRM5P41594 1212 aa16.8■□□□□ 0.28
NUP50-219ENST00000497960 ITIH3Q06033 890 aa16.8■□□□□ 0.28
NUP50-219ENST00000497960 HSP90AA2PQ14568 343 aaPredicted RBP16.8■□□□□ 0.28
NUP50-219ENST00000497960 CBX2Q14781 532 aaPredicted RBP16.8■□□□□ 0.28
NUP50-219ENST00000497960 SPECC1Q5M775 1068 aa16.8■□□□□ 0.28
NUP50-219ENST00000497960 FUT10Q6P4F1 479 aa16.8■□□□□ 0.28
NUP50-219ENST00000497960 MPZL3Q6UWV2 235 aa16.8■□□□□ 0.28
NUP50-219ENST00000497960 ZBTB33Q86T24 672 aa16.8■□□□□ 0.28
NUP50-219ENST00000497960 KRI1Q8N9T8 703 aaKnown RBP16.8■□□□□ 0.28
NUP50-219ENST00000497960 SLC22A17Q8WUG5 538 aa16.8■□□□□ 0.28
NUP50-219ENST00000497960 SUSD6Q92537 303 aa16.8■□□□□ 0.28
NUP50-219ENST00000497960 LARP4BQ92615 738 aaKnown RBP16.8■□□□□ 0.28
NUP50-219ENST00000497960 EPSTI1Q96J88 318 aa16.8■□□□□ 0.28
NUP50-219ENST00000497960 REEP2Q9BRK0 252 aa16.8■□□□□ 0.28
NUP50-219ENST00000497960 PTPRHQ9HD43 1115 aa16.8■□□□□ 0.28
NUP50-219ENST00000497960 TOPORSQ9NS56 1045 aaPredicted RBP16.8■□□□□ 0.28
NUP50-219ENST00000497960 MORC2Q9Y6X9 1032 aaPredicted RBP16.8■□□□□ 0.28
NUP50-219ENST00000497960 MUC3AQ02505 3323 aa16.79■□□□□ 0.28
NUP50-219ENST00000497960 SPDYE4A6NLX3 237 aa16.79■□□□□ 0.28
NUP50-219ENST00000497960 F8W810 466 aa16.79■□□□□ 0.28
NUP50-219ENST00000497960 PI4K2BG5E9Z4 385 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms