RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 CENPVL1A0A0U1RR11 272 aa4.4□□□□□ -1.71
PSPC1-205ENST00000497722 WNT10BO00744 389 aa4.4□□□□□ -1.71
PSPC1-205ENST00000497722 ITGA10O75578 1167 aa4.4□□□□□ -1.71
PSPC1-205ENST00000497722 SCAF4O95104 1147 aaKnown RBP4.4□□□□□ -1.71
PSPC1-205ENST00000497722 GCP02774 474 aa4.4□□□□□ -1.71
PSPC1-205ENST00000497722 CCND1P24385 295 aa4.4□□□□□ -1.71
PSPC1-205ENST00000497722 LGALS4P56470 323 aa4.4□□□□□ -1.71
PSPC1-205ENST00000497722 APBA1Q02410 837 aa4.4□□□□□ -1.71
PSPC1-205ENST00000497722 NECAB2Q7Z6G3 386 aa4.4□□□□□ -1.71
PSPC1-205ENST00000497722 CNTD1Q8N815 330 aa4.4□□□□□ -1.71
PSPC1-205ENST00000497722 PROKR1Q8TCW9 393 aa4.4□□□□□ -1.71
PSPC1-205ENST00000497722 EAF2Q96CJ1 260 aaPredicted RBP4.4□□□□□ -1.71
PSPC1-205ENST00000497722 CEP95Q96GE4 821 aa4.4□□□□□ -1.71
PSPC1-205ENST00000497722 GPATCH3Q96I76 525 aa4.4□□□□□ -1.71
PSPC1-205ENST00000497722 SCOCQ9UIL1 159 aa4.4□□□□□ -1.71
PSPC1-205ENST00000497722 ZBTB21Q9ULJ3 1066 aa4.4□□□□□ -1.71
PSPC1-205ENST00000497722 TBKBP1A7MCY6 615 aa4.39□□□□□ -1.71
PSPC1-205ENST00000497722 PPFIA4O75335 1185 aa4.39□□□□□ -1.71
PSPC1-205ENST00000497722 KATNA1O75449 491 aa4.39□□□□□ -1.71
PSPC1-205ENST00000497722 RECQL4O94761 1208 aa4.39□□□□□ -1.71
PSPC1-205ENST00000497722 EYA4O95677 639 aa4.39□□□□□ -1.71
PSPC1-205ENST00000497722 ABHD16AO95870 558 aa4.39□□□□□ -1.71
PSPC1-205ENST00000497722 GASTP01350 101 aa4.39□□□□□ -1.71
PSPC1-205ENST00000497722 ENPP1P22413 925 aa4.39□□□□□ -1.71
PSPC1-205ENST00000497722 CDKN1CP49918 316 aaPredicted RBP4.39□□□□□ -1.71
PSPC1-205ENST00000497722 UGT8Q16880 541 aa4.39□□□□□ -1.71
PSPC1-205ENST00000497722 BMT2Q1RMZ1 405 aa4.39□□□□□ -1.71
PSPC1-205ENST00000497722 LY6G5CQ5SRR4 150 aa4.39□□□□□ -1.71
PSPC1-205ENST00000497722 LHFPL2Q6ZUX7 228 aa4.39□□□□□ -1.71
PSPC1-205ENST00000497722 GDF7Q7Z4P5 450 aa4.39□□□□□ -1.71
PSPC1-205ENST00000497722 GPR150Q8NGU9 434 aa4.39□□□□□ -1.71
PSPC1-205ENST00000497722 TSPEARQ8WU66 669 aa4.39□□□□□ -1.71
PSPC1-205ENST00000497722 ACAP3Q96P50 834 aa4.39□□□□□ -1.71
PSPC1-205ENST00000497722 DCLRE1CQ96SD1 692 aaKnown RBP4.39□□□□□ -1.71
PSPC1-205ENST00000497722 TEX101Q9BY14 249 aa4.39□□□□□ -1.71
PSPC1-205ENST00000497722 PUS7LQ9H0K6 701 aaKnown RBP4.39□□□□□ -1.71
PSPC1-205ENST00000497722 C14orf119Q9NWQ9 140 aa4.39□□□□□ -1.71
PSPC1-205ENST00000497722 GPRC5DQ9NZD1 345 aa4.39□□□□□ -1.71
PSPC1-205ENST00000497722 CLCA2Q9UQC9 943 aa4.39□□□□□ -1.71
PSPC1-205ENST00000497722 ATRNL1Q5VV63 1379 aa4.39□□□□□ -1.71
PSPC1-205ENST00000497722 GAGE12BA1L429 117 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 GAGE12HA6NDE8 117 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 MARCH11A6NNE9 402 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 B5MCH6 92 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 LPXNO60711 386 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 PRKD3O94806 890 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 MYBL2P10244 700 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 LAG3P18627 525 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 CRHR1P34998 444 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 ACAP2Q15057 778 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 MST1LQ2TV78 715 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 BEAN1Q3B7T3 259 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 MFSD14BQ5SR56 506 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 PRAMEF14Q5SWL7 426 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 FAM102AQ5T9C2 384 aaPredicted RBP4.38□□□□□ -1.71
PSPC1-205ENST00000497722 PGM2L1Q6PCE3 622 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 KCNK18Q7Z418 384 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 PNMA8AQ86V59 439 aaPredicted RBP4.38□□□□□ -1.71
PSPC1-205ENST00000497722 ARHGEF19Q8IW93 802 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 CMIPQ8IY22 773 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 SYNE4Q8N205 404 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 TGFBRAP1Q8WUH2 860 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 LMBR1Q8WVP7 490 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 HOXB13Q92826 284 aaPredicted RBP4.38□□□□□ -1.71
PSPC1-205ENST00000497722 PAWRQ96IZ0 340 aaKnown RBP4.38□□□□□ -1.71
PSPC1-205ENST00000497722 NEU1Q99519 415 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 SYBUQ9NX95 663 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 EIF2B4Q9UI10 523 aaKnown RBP4.38□□□□□ -1.71
PSPC1-205ENST00000497722 PACSIN3Q9UKS6 424 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 EDARQ9UNE0 448 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 MRFAP1Q9Y605 127 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 RPTORQ8N122 1335 aa4.38□□□□□ -1.71
PSPC1-205ENST00000497722 PRR5-ARHGAP8B1AHC4 643 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 DIRC3C9JPN6 131 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 ZNF185O15231 689 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 ADCY6O43306 1168 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 PRAMEF4O60810 478 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 NCR1O76036 304 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 LMNAP02545 664 aaKnown RBP4.37□□□□□ -1.71
PSPC1-205ENST00000497722 HSP90B1P14625 803 aaKnown RBP4.37□□□□□ -1.71
PSPC1-205ENST00000497722 BMPR1AP36894 532 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 ZEB1P37275 1124 aaPredicted RBP4.37□□□□□ -1.71
PSPC1-205ENST00000497722 NHLH2Q02577 135 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 PTPAQ15257 358 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.37□□□□□ -1.71
PSPC1-205ENST00000497722 TIGD2Q4W5G0 525 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.37□□□□□ -1.71
PSPC1-205ENST00000497722 KCNV1Q6PIU1 500 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 Q6YL49 198 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 Q6ZVL8 140 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 OR10H5Q8NGA6 315 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 MDM1Q8TC05 714 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 CDC5LQ99459 802 aaKnown RBP4.37□□□□□ -1.71
PSPC1-205ENST00000497722 ADAM2Q99965 735 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 QRSL1Q9H0R6 528 aaKnown RBP4.37□□□□□ -1.71
PSPC1-205ENST00000497722 EPC1Q9H2F5 836 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 TOR3AQ9H497 397 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 SYNPO2LQ9H987 977 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 VTA1Q9NP79 307 aa4.37□□□□□ -1.71
PSPC1-205ENST00000497722 AKIP1Q9NQ31 210 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms