RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 USP1O94782 785 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 TTC4O95801 387 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 GJC1P36383 396 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 DRG2P55039 364 aaKnown RBP13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 SPARCL1Q14515 664 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 PDIA5Q14554 519 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 GALNT17Q6IS24 598 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 LCA5Q86VQ0 697 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 DZIP1Q86YF9 867 aaKnown RBP13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 ART4Q93070 314 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 TIPINQ9BVW5 301 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 SPATA16Q9BXB7 569 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 CLIC5Q9NZA1 410 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 PARP4Q9UKK3 1724 aaKnown RBP13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 BAZ2AQ9UIF9 1905 aaKnown RBP13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 A0A0A6YYK5 440 aaPredicted RBP13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 SFI1A8K8P3 1242 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 TMEM253P0C7T8 217 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 PABPC4Q13310 644 aaKnown RBP eCLIP13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 GIT2Q14161 759 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 GRM4Q14833 912 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 FYB2Q5VWT5 728 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 PHLDB2Q86SQ0 1253 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 SLC25A41Q8N5S1 370 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 GPR101Q96P66 508 aaPredicted RBP13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 MKNK1Q9BUB5 465 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 MXD3Q9BW11 206 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 EXOC1LA0A1B0GW35 172 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 ZBED4O75132 1171 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 HAUS5O94927 633 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 HNRNPCP07910 306 aaKnown RBP eCLIP13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 CHRNB2P17787 502 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 PIK3CAP42336 1068 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 CCDC15Q0P6D6 951 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 C12orf65Q9H3J6 166 aaKnown RBP13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 BCAS3Q9H6U6 928 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 AAASQ9NRG9 546 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 ARL8BQ9NVJ2 186 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 NINJ2Q9NZG7 142 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 ANAPC5Q9UJX4 755 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 TTC7AQ9ULT0 858 aaPredicted RBP13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 MYH3P11055 1940 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 C2orf71A6NGG8 1288 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 COQ9O75208 318 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 STAT3P40763 770 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 INHBCP55103 352 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 BPIFB4P59827 614 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 TRIM42Q8IWZ5 723 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 SLC20A1Q8WUM9 679 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 CDH16O75309 829 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 GCNT3O95395 438 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 ADAMTS2O95450 1211 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 FTLP02792 175 aaPredicted RBP13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 TRIM49P0CI25 452 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 TRIM49CP0CI26 452 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 SOX5P35711 763 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 PRKCIP41743 596 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 ACVR2BQ13705 512 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 DDB1Q16531 1140 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 TNFAIP8L3Q5GJ75 292 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 PHLDB3Q6NSJ2 640 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 SFR1Q86XK3 245 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 MPP4Q96JB8 637 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 SLC4A9Q96Q91 983 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 PHACTR1Q9C0D0 580 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 FBXO6Q9NRD1 293 aaPredicted RBP13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 PHF24Q9UPV7 400 aa13.92□□□□□ -0.18
GAPVD1-220ENST00000497580 ATF2P15336 505 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 AMPD1P23109 780 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 PPATQ06203 517 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 PRR11Q96HE9 360 aaPredicted RBP13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 KLF6Q99612 283 aaPredicted RBP13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 TMEM47Q9BQJ4 181 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 ZSWIM1Q9BR11 485 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 TRABDQ9H4I3 376 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 DDX18Q9NVP1 670 aaKnown RBP13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 DIS3Q9Y2L1 958 aaKnown RBP13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 TNS3Q68CZ2 1445 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 POTEFA5A3E0 1075 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 GOLGA8RI6L899 631 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 POTEIP0CG38 1075 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 ESRRAP11474 423 aaPredicted RBP13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 NPEPPSP55786 919 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 KCNA1Q09470 495 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 MAP7Q14244 749 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 EPHA7Q15375 998 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 WDR72Q3MJ13 1102 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 LIN52Q52LA3 116 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 POTEGQ6S5H5 508 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 POTEEQ6S8J3 1075 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 SPATA24Q86W54 205 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 SLC13A5Q86YT5 568 aaPredicted RBP13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 SH3TC2Q8TF17 1288 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 KCTD10Q9H3F6 313 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 ARMCX1Q9P291 453 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 LARSQ9P2J5 1176 aaKnown RBP13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 HEY2Q9UBP5 337 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 BLOC1S6Q9UL45 172 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 PCDHA12Q9UN75 941 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 ZNF232Q9UNY5 417 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms