RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 SPON1Q9HCB6 807 aa8.17□□□□□ -1.1
TARDBP-210ENST00000496840 ZBTB21Q9ULJ3 1066 aa8.17□□□□□ -1.1
TARDBP-210ENST00000496840 CHST2Q9Y4C5 530 aa8.17□□□□□ -1.1
TARDBP-210ENST00000496840 TRIM75PA6NK02 468 aa8.16□□□□□ -1.1
TARDBP-210ENST00000496840 ITGB1P05556 798 aa8.16□□□□□ -1.1
TARDBP-210ENST00000496840 MCAMP43121 646 aa8.16□□□□□ -1.1
TARDBP-210ENST00000496840 INHBCP55103 352 aa8.16□□□□□ -1.1
TARDBP-210ENST00000496840 SP140Q13342 867 aa8.16□□□□□ -1.1
TARDBP-210ENST00000496840 KLF1Q13351 362 aaPredicted RBP8.16□□□□□ -1.1
TARDBP-210ENST00000496840 RNF187Q5TA31 235 aaPredicted RBP8.16□□□□□ -1.1
TARDBP-210ENST00000496840 LRRC55Q6ZSA7 311 aa8.16□□□□□ -1.1
TARDBP-210ENST00000496840 LDLRAD3Q86YD5 345 aa8.16□□□□□ -1.1
TARDBP-210ENST00000496840 OR10H5Q8NGA6 315 aa8.16□□□□□ -1.1
TARDBP-210ENST00000496840 ZFP28Q8NHY6 868 aa8.16□□□□□ -1.1
TARDBP-210ENST00000496840 SSH1Q8WYL5 1049 aa8.16□□□□□ -1.1
TARDBP-210ENST00000496840 TFAP2CQ92754 450 aa8.16□□□□□ -1.1
TARDBP-210ENST00000496840 WDR33Q9C0J8 1336 aaKnown RBP8.16□□□□□ -1.1
TARDBP-210ENST00000496840 ZNF277Q9NRM2 450 aaPredicted RBP8.16□□□□□ -1.1
TARDBP-210ENST00000496840 ATP8A1Q9Y2Q0 1164 aa8.16□□□□□ -1.1
TARDBP-210ENST00000496840 ATRNL1Q5VV63 1379 aa8.15□□□□□ -1.1
TARDBP-210ENST00000496840 GAGE12BA1L429 117 aa8.15□□□□□ -1.1
TARDBP-210ENST00000496840 GAGE12HA6NDE8 117 aa8.15□□□□□ -1.1
TARDBP-210ENST00000496840 RBP3P10745 1247 aa8.15□□□□□ -1.1
TARDBP-210ENST00000496840 ALOX15P16050 662 aaPredicted RBP8.15□□□□□ -1.1
TARDBP-210ENST00000496840 PTPN7P35236 360 aa8.15□□□□□ -1.1
TARDBP-210ENST00000496840 SREBF1P36956 1147 aa8.15□□□□□ -1.1
TARDBP-210ENST00000496840 ZNF627Q7L945 461 aa8.15□□□□□ -1.1
TARDBP-210ENST00000496840 GDF7Q7Z4P5 450 aa8.15□□□□□ -1.1
TARDBP-210ENST00000496840 SYT12Q8IV01 421 aa8.15□□□□□ -1.1
TARDBP-210ENST00000496840 ADI1Q9BV57 179 aa8.15□□□□□ -1.1
TARDBP-210ENST00000496840 SLC5A4Q9NY91 659 aa8.15□□□□□ -1.1
TARDBP-210ENST00000496840 GPR45Q9Y5Y3 372 aa8.15□□□□□ -1.1
TARDBP-210ENST00000496840 HS3ST4Q9Y661 456 aa8.15□□□□□ -1.1
TARDBP-210ENST00000496840 SBNO2Q9Y2G9 1366 aa8.14□□□□□ -1.11
TARDBP-210ENST00000496840 LEFTY2O00292 366 aa8.14□□□□□ -1.11
TARDBP-210ENST00000496840 SNRPA1P09661 255 aaKnown RBP8.14□□□□□ -1.11
TARDBP-210ENST00000496840 ZSCAN20P17040 1043 aaPredicted RBP8.14□□□□□ -1.11
TARDBP-210ENST00000496840 CLRN1P58418 232 aa8.14□□□□□ -1.11
TARDBP-210ENST00000496840 MGAT2Q10469 447 aa8.14□□□□□ -1.11
TARDBP-210ENST00000496840 Q6ZPA2 131 aa8.14□□□□□ -1.11
TARDBP-210ENST00000496840 REPS2Q8NFH8 660 aa8.14□□□□□ -1.11
TARDBP-210ENST00000496840 CHFRQ96EP1 664 aa8.14□□□□□ -1.11
TARDBP-210ENST00000496840 SLITRK6Q9H5Y7 841 aa8.14□□□□□ -1.11
TARDBP-210ENST00000496840 DMRT3Q9NQL9 472 aa8.14□□□□□ -1.11
TARDBP-210ENST00000496840 CXorf49A8MYA2 514 aaPredicted RBP8.13□□□□□ -1.11
TARDBP-210ENST00000496840 ENDOD1O94919 500 aa8.13□□□□□ -1.11
TARDBP-210ENST00000496840 OSMP13725 252 aa8.13□□□□□ -1.11
TARDBP-210ENST00000496840 AGXTP21549 392 aa8.13□□□□□ -1.11
TARDBP-210ENST00000496840 ZFP36P26651 326 aaKnown RBP8.13□□□□□ -1.11
TARDBP-210ENST00000496840 GUCY1A2P33402 732 aa8.13□□□□□ -1.11
TARDBP-210ENST00000496840 PTTG1IPP53801 180 aa8.13□□□□□ -1.11
TARDBP-210ENST00000496840 NHLH2Q02577 135 aa8.13□□□□□ -1.11
TARDBP-210ENST00000496840 INAVAQ3KP66 663 aa8.13□□□□□ -1.11
TARDBP-210ENST00000496840 LY6G5CQ5SRR4 150 aa8.13□□□□□ -1.11
TARDBP-210ENST00000496840 PLXDC1Q8IUK5 500 aa8.13□□□□□ -1.11
TARDBP-210ENST00000496840 CNTD1Q8N815 330 aa8.13□□□□□ -1.11
TARDBP-210ENST00000496840 SLC35B2Q8TB61 432 aa8.13□□□□□ -1.11
TARDBP-210ENST00000496840 MYEOVQ96EZ4 313 aa8.13□□□□□ -1.11
TARDBP-210ENST00000496840 ZNF768Q9H5H4 540 aaKnown RBP8.13□□□□□ -1.11
TARDBP-210ENST00000496840 LANCL2Q9NS86 450 aa8.13□□□□□ -1.11
TARDBP-210ENST00000496840 TRPM5Q9NZQ8 1165 aa8.13□□□□□ -1.11
TARDBP-210ENST00000496840 POGKQ9P215 609 aa8.13□□□□□ -1.11
TARDBP-210ENST00000496840 TMEM191CA6NGB0 347 aa8.12□□□□□ -1.11
TARDBP-210ENST00000496840 FAM171A2A8MVW0 826 aa8.12□□□□□ -1.11
TARDBP-210ENST00000496840 RNASET2O00584 256 aaKnown RBP8.12□□□□□ -1.11
TARDBP-210ENST00000496840 ABHD16AO95870 558 aa8.12□□□□□ -1.11
TARDBP-210ENST00000496840 IL2RBP14784 551 aa8.12□□□□□ -1.11
TARDBP-210ENST00000496840 LAG3P18627 525 aa8.12□□□□□ -1.11
TARDBP-210ENST00000496840 PER3P56645 1201 aa8.12□□□□□ -1.11
TARDBP-210ENST00000496840 MRGPRGQ86SM5 289 aa8.12□□□□□ -1.11
TARDBP-210ENST00000496840 AMOTL1Q8IY63 956 aa8.12□□□□□ -1.11
TARDBP-210ENST00000496840 PQLC1Q8N2U9 271 aa8.12□□□□□ -1.11
TARDBP-210ENST00000496840 CASKIN2Q8WXE0 1202 aa8.12□□□□□ -1.11
TARDBP-210ENST00000496840 UHRF1Q96T88 793 aaPredicted RBP8.12□□□□□ -1.11
TARDBP-210ENST00000496840 MOCS1Q9NZB8 636 aa8.12□□□□□ -1.11
TARDBP-210ENST00000496840 GSPT1P15170 499 aaKnown RBP8.11□□□□□ -1.11
TARDBP-210ENST00000496840 KRT4P19013 534 aa8.11□□□□□ -1.11
TARDBP-210ENST00000496840 RNASE9P60153 205 aaKnown RBP8.11□□□□□ -1.11
TARDBP-210ENST00000496840 NOMO1Q15155 1222 aa8.11□□□□□ -1.11
TARDBP-210ENST00000496840 TIGD2Q4W5G0 525 aa8.11□□□□□ -1.11
TARDBP-210ENST00000496840 RRP12Q5JTH9 1297 aaKnown RBP8.11□□□□□ -1.11
TARDBP-210ENST00000496840 ATXN7L2Q5T6C5 722 aaPredicted RBP8.11□□□□□ -1.11
TARDBP-210ENST00000496840 FAM102AQ5T9C2 384 aaPredicted RBP8.11□□□□□ -1.11
TARDBP-210ENST00000496840 METRNLQ641Q3 311 aa8.11□□□□□ -1.11
TARDBP-210ENST00000496840 RPUSD2Q8IZ73 545 aaKnown RBP8.11□□□□□ -1.11
TARDBP-210ENST00000496840 RNF169Q8NCN4 708 aa8.11□□□□□ -1.11
TARDBP-210ENST00000496840 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.11□□□□□ -1.113e-13■□□□□ 8.3
TARDBP-210ENST00000496840 PROKR1Q8TCW9 393 aa8.11□□□□□ -1.11
TARDBP-210ENST00000496840 CEP89Q96ST8 783 aa8.11□□□□□ -1.11
TARDBP-210ENST00000496840 MLST8Q9BVC4 326 aa8.11□□□□□ -1.11
TARDBP-210ENST00000496840 IKZF4Q9H2S9 585 aa8.11□□□□□ -1.11
TARDBP-210ENST00000496840 FAM30AQ9NZY2 134 aa8.11□□□□□ -1.11
TARDBP-210ENST00000496840 PCDHGA2Q9Y5H1 932 aa8.11□□□□□ -1.11
TARDBP-210ENST00000496840 TMEM200CA6NKL6 621 aa8.1□□□□□ -1.11
TARDBP-210ENST00000496840 SUV39H1O43463 412 aa8.1□□□□□ -1.11
TARDBP-210ENST00000496840 SPATA31D3P0C874 917 aa8.1□□□□□ -1.11
TARDBP-210ENST00000496840 FAM189BP81408 668 aa8.1□□□□□ -1.11
TARDBP-210ENST00000496840 KCNV1Q6PIU1 500 aa8.1□□□□□ -1.11
TARDBP-210ENST00000496840 SPATA31D4Q6ZUB0 917 aa8.1□□□□□ -1.11
TARDBP-210ENST00000496840 DRC7Q8IY82 874 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms