RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 YARSP54577 528 aaKnown RBP23.7■■□□□ 1.38
C9orf3-222ENST00000496567 ZNF445P59923 1031 aa23.7■■□□□ 1.38
C9orf3-222ENST00000496567 OSTNP61366 133 aa23.7■■□□□ 1.38
C9orf3-222ENST00000496567 POU5F1Q01860 360 aaKnown RBP23.7■■□□□ 1.38
C9orf3-222ENST00000496567 TPD52L1Q16890 204 aaPredicted RBP23.7■■□□□ 1.38
C9orf3-222ENST00000496567 NPAS4Q8IUM7 802 aa23.7■■□□□ 1.38
C9orf3-222ENST00000496567 CSGALNACT2Q8N6G5 542 aa23.7■■□□□ 1.38
C9orf3-222ENST00000496567 RNF169Q8NCN4 708 aa23.7■■□□□ 1.38
C9orf3-222ENST00000496567 NOC3LQ8WTT2 800 aaKnown RBP23.7■■□□□ 1.38
C9orf3-222ENST00000496567 FBXL18Q96ME1 805 aa23.7■■□□□ 1.38
C9orf3-222ENST00000496567 DUSP9Q99956 384 aaKnown RBP23.7■■□□□ 1.38
C9orf3-222ENST00000496567 UBE2OQ9C0C9 1292 aaKnown RBP23.7■■□□□ 1.38
C9orf3-222ENST00000496567 TOPORSQ9NS56 1045 aaPredicted RBP23.7■■□□□ 1.38
C9orf3-222ENST00000496567 CPSF3Q9UKF6 684 aaKnown RBP23.7■■□□□ 1.38
C9orf3-222ENST00000496567 ATF7P17544 494 aaPredicted RBP23.69■■□□□ 1.38
C9orf3-222ENST00000496567 ACOT2P49753 483 aa23.69■■□□□ 1.38
C9orf3-222ENST00000496567 ZC3H3Q8IXZ2 948 aaKnown RBP23.69■■□□□ 1.38
C9orf3-222ENST00000496567 ENOX1Q8TC92 643 aaKnown RBP23.69■■□□□ 1.38
C9orf3-222ENST00000496567 CEP63Q96MT8 703 aa23.69■■□□□ 1.38
C9orf3-222ENST00000496567 BPIFA3Q9BQP9 254 aa23.69■■□□□ 1.38
C9orf3-222ENST00000496567 APOL6Q9BWW8 343 aa23.69■■□□□ 1.38
C9orf3-222ENST00000496567 PARP2Q9UGN5 583 aa23.69■■□□□ 1.38
C9orf3-222ENST00000496567 GIT1Q9Y2X7 761 aa23.69■■□□□ 1.38
C9orf3-222ENST00000496567 TTC3P53804 2025 aa23.69■■□□□ 1.38
C9orf3-222ENST00000496567 GOLGA8IPA6NC78 632 aa23.69■■□□□ 1.38
C9orf3-222ENST00000496567 ZNF233A6NK53 670 aa23.69■■□□□ 1.38
C9orf3-222ENST00000496567 GOLGA8JA6NMD2 632 aa23.69■■□□□ 1.38
C9orf3-222ENST00000496567 ZNF165P49910 485 aa23.69■■□□□ 1.38
C9orf3-222ENST00000496567 SEZ6Q53EL9 994 aa23.69■■□□□ 1.38
C9orf3-222ENST00000496567 CEP135Q66GS9 1140 aa23.69■■□□□ 1.38
C9orf3-222ENST00000496567 TOP1MTQ969P6 601 aa23.69■■□□□ 1.38
C9orf3-222ENST00000496567 MED15Q96RN5 788 aa23.69■■□□□ 1.38
C9orf3-222ENST00000496567 RPF1Q9H9Y2 349 aaKnown RBP23.69■■□□□ 1.38
C9orf3-222ENST00000496567 SLC4A7Q9Y6M7 1214 aa23.69■■□□□ 1.38
C9orf3-222ENST00000496567 HOXA2O43364 376 aa23.68■■□□□ 1.38
C9orf3-222ENST00000496567 AKAP5P24588 427 aa23.68■■□□□ 1.38
C9orf3-222ENST00000496567 TNFSF9P41273 254 aa23.68■■□□□ 1.38
C9orf3-222ENST00000496567 SNRNP35Q16560 246 aaKnown RBP23.68■■□□□ 1.38
C9orf3-222ENST00000496567 ZBTB41Q5SVQ8 909 aa23.68■■□□□ 1.38
C9orf3-222ENST00000496567 SPATA1Q5VX52 437 aa23.68■■□□□ 1.38
C9orf3-222ENST00000496567 CRELD2Q6UXH1 353 aaPredicted RBP23.68■■□□□ 1.38
C9orf3-222ENST00000496567 CRIPAKQ8N1N5 446 aa23.68■■□□□ 1.38
C9orf3-222ENST00000496567 MKNK1Q9BUB5 465 aa23.68■■□□□ 1.38
C9orf3-222ENST00000496567 RNF39Q9H2S5 420 aa23.68■■□□□ 1.38
C9orf3-222ENST00000496567 TSPY26PQ9H489 355 aa23.68■■□□□ 1.38
C9orf3-222ENST00000496567 RSAD1Q9HA92 442 aa23.68■■□□□ 1.38
C9orf3-222ENST00000496567 TNRC18O15417 2968 aaPredicted RBP23.67■■□□□ 1.38
C9orf3-222ENST00000496567 MAPK13O15264 365 aa23.67■■□□□ 1.38
C9orf3-222ENST00000496567 RECQL4O94761 1208 aa23.67■■□□□ 1.38
C9orf3-222ENST00000496567 PSMC2P35998 433 aaKnown RBP23.67■■□□□ 1.38
C9orf3-222ENST00000496567 DEFB103AP81534 67 aa23.67■■□□□ 1.38
C9orf3-222ENST00000496567 MYL5Q02045 173 aa23.67■■□□□ 1.38
C9orf3-222ENST00000496567 AGMOQ6ZNB7 445 aa23.67■■□□□ 1.38
C9orf3-222ENST00000496567 LRRC55Q6ZSA7 311 aa23.67■■□□□ 1.38
C9orf3-222ENST00000496567 TMEM192Q8IY95 271 aa23.67■■□□□ 1.38
C9orf3-222ENST00000496567 RDH13Q8NBN7 331 aa23.67■■□□□ 1.38
C9orf3-222ENST00000496567 ZSWIM2Q8NEG5 633 aa23.67■■□□□ 1.38
C9orf3-222ENST00000496567 PHOSPHO2Q8TCD6 241 aa23.67■■□□□ 1.38
C9orf3-222ENST00000496567 RSPH1Q8WYR4 309 aa23.67■■□□□ 1.38
C9orf3-222ENST00000496567 LPPQ93052 612 aa23.67■■□□□ 1.38
C9orf3-222ENST00000496567 SLC9A7Q96T83 725 aa23.67■■□□□ 1.38
C9orf3-222ENST00000496567 SRRTQ9BXP5 876 aaKnown RBP23.67■■□□□ 1.38
C9orf3-222ENST00000496567 PLEKHA5Q9HAU0 1116 aa23.67■■□□□ 1.38
C9orf3-222ENST00000496567 CXXC1Q9P0U4 656 aaPredicted RBP23.67■■□□□ 1.38
C9orf3-222ENST00000496567 SLC16A3O15427 465 aaKnown RBP23.66■■□□□ 1.38
C9orf3-222ENST00000496567 UPP2O95045 317 aa23.66■■□□□ 1.38
C9orf3-222ENST00000496567 EPB41P11171 864 aaKnown RBP23.66■■□□□ 1.38
C9orf3-222ENST00000496567 BMP8BP34820 402 aa23.66■■□□□ 1.38
C9orf3-222ENST00000496567 RASIP1Q5U651 963 aa23.66■■□□□ 1.38
C9orf3-222ENST00000496567 FILIP1Q7Z7B0 1213 aa23.66■■□□□ 1.38
C9orf3-222ENST00000496567 CBWD2Q8IUF1 395 aa23.66■■□□□ 1.38
C9orf3-222ENST00000496567 BRSK2Q8IWQ3 736 aa23.66■■□□□ 1.38
C9orf3-222ENST00000496567 CD302Q8IX05 232 aa23.66■■□□□ 1.38
C9orf3-222ENST00000496567 RNPC3Q96LT9 517 aaKnown RBP23.66■■□□□ 1.38
C9orf3-222ENST00000496567 RBAKQ9NYW8 714 aaPredicted RBP23.66■■□□□ 1.38
C9orf3-222ENST00000496567 CEP290O15078 2479 aa23.66■■□□□ 1.38
C9orf3-222ENST00000496567 MEIS3P2A8K0S8 358 aa23.65■■□□□ 1.38
C9orf3-222ENST00000496567 AKAP3O75969 853 aa23.65■■□□□ 1.38
C9orf3-222ENST00000496567 GNA14O95837 355 aa23.65■■□□□ 1.38
C9orf3-222ENST00000496567 CXCL8P10145 99 aa23.65■■□□□ 1.38
C9orf3-222ENST00000496567 CASP4P49662 377 aa23.65■■□□□ 1.38
C9orf3-222ENST00000496567 SHHQ15465 462 aa23.65■■□□□ 1.38
C9orf3-222ENST00000496567 ENOX2Q16206 610 aaKnown RBP23.65■■□□□ 1.38
C9orf3-222ENST00000496567 C9orf50Q5SZB4 431 aa23.65■■□□□ 1.38
C9orf3-222ENST00000496567 GLB1LQ6UWU2 654 aa23.65■■□□□ 1.38
C9orf3-222ENST00000496567 FAM186BQ8IYM0 893 aa23.65■■□□□ 1.38
C9orf3-222ENST00000496567 EEF2KMTQ96G04 330 aa23.65■■□□□ 1.38
C9orf3-222ENST00000496567 SMTNL1A8MU46 457 aa23.65■■□□□ 1.38
C9orf3-222ENST00000496567 IKBKBO14920 756 aa23.65■■□□□ 1.38
C9orf3-222ENST00000496567 IL18RAPO95256 599 aa23.65■■□□□ 1.38
C9orf3-222ENST00000496567 PPP2R3AQ06190 1150 aa23.65■■□□□ 1.38
C9orf3-222ENST00000496567 SURF1Q15526 300 aa23.65■■□□□ 1.38
C9orf3-222ENST00000496567 SLC10A6Q3KNW5 377 aa23.65■■□□□ 1.38
C9orf3-222ENST00000496567 ABI1Q8IZP0 508 aa23.65■■□□□ 1.38
C9orf3-222ENST00000496567 NFE2L3Q9Y4A8 694 aa23.65■■□□□ 1.38
C9orf3-222ENST00000496567 PDE4DIPQ5VU43 2346 aa23.64■■□□□ 1.37
C9orf3-222ENST00000496567 ADRB2P07550 413 aa23.64■■□□□ 1.37
C9orf3-222ENST00000496567 CYP24A1Q07973 514 aa23.64■■□□□ 1.37
C9orf3-222ENST00000496567 AOPEPQ8N6M6 819 aa23.64■■□□□ 1.37
C9orf3-222ENST00000496567 FAM212AQ96EL1 285 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms