RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 RABGGTAQ92696 567 aa15.74■□□□□ 0.11
VTI1A-209ENST00000496445 IFT74Q96LB3 600 aa15.74■□□□□ 0.11
VTI1A-209ENST00000496445 RIPOR3Q96MK2 946 aa15.74■□□□□ 0.11
VTI1A-209ENST00000496445 PNMA5Q96PV4 448 aa15.74■□□□□ 0.11
VTI1A-209ENST00000496445 GPR62Q9BZJ7 368 aa15.74■□□□□ 0.11
VTI1A-209ENST00000496445 SFXN1Q9H9B4 322 aa15.74■□□□□ 0.11
VTI1A-209ENST00000496445 CHST7Q9NS84 486 aa15.74■□□□□ 0.11
VTI1A-209ENST00000496445 ADAM28Q9UKQ2 775 aa15.74■□□□□ 0.11
VTI1A-209ENST00000496445 NR2E1Q9Y466 385 aa15.74■□□□□ 0.11
VTI1A-209ENST00000496445 MYO10Q9HD67 2058 aa15.74■□□□□ 0.11
VTI1A-209ENST00000496445 PHLPP2Q6ZVD8 1323 aa15.73■□□□□ 0.11
VTI1A-209ENST00000496445 CASTOR2A6NHX0 329 aa15.73■□□□□ 0.11
VTI1A-209ENST00000496445 NR1I2O75469 434 aa15.73■□□□□ 0.11
VTI1A-209ENST00000496445 MCM2P49736 904 aa15.73■□□□□ 0.11
VTI1A-209ENST00000496445 TUSC3Q13454 348 aa15.73■□□□□ 0.11
VTI1A-209ENST00000496445 HSP90AA2PQ14568 343 aaPredicted RBP15.73■□□□□ 0.11
VTI1A-209ENST00000496445 PTPN21Q16825 1174 aa15.73■□□□□ 0.11
VTI1A-209ENST00000496445 TMEM132AQ24JP5 1023 aa15.73■□□□□ 0.11
VTI1A-209ENST00000496445 HYIQ5T013 277 aa15.73■□□□□ 0.11
VTI1A-209ENST00000496445 ATF7IP2Q5U623 682 aa15.73■□□□□ 0.11
VTI1A-209ENST00000496445 RINT1Q6NUQ1 792 aa15.73■□□□□ 0.11
VTI1A-209ENST00000496445 C1orf186Q6ZWK4 172 aa15.73■□□□□ 0.11
VTI1A-209ENST00000496445 TAS1R3Q7RTX0 852 aa15.73■□□□□ 0.11
VTI1A-209ENST00000496445 FAM122AQ96E09 287 aa15.73■□□□□ 0.11
VTI1A-209ENST00000496445 COLEC11Q9BWP8 271 aa15.73■□□□□ 0.11
VTI1A-209ENST00000496445 RXFP1Q9HBX9 757 aa15.73■□□□□ 0.11
VTI1A-209ENST00000496445 MAN1C1Q9NR34 630 aa15.73■□□□□ 0.11
VTI1A-209ENST00000496445 TSHZ2Q9NRE2 1034 aa15.73■□□□□ 0.11
VTI1A-209ENST00000496445 DNM3Q9UQ16 869 aa15.73■□□□□ 0.11
VTI1A-209ENST00000496445 CITO14578 2027 aa15.73■□□□□ 0.11
VTI1A-209ENST00000496445 TMEM221A6NGB7 291 aa15.72■□□□□ 0.11
VTI1A-209ENST00000496445 H3BQV1 296 aa15.72■□□□□ 0.11
VTI1A-209ENST00000496445 M0R296 226 aa15.72■□□□□ 0.11
VTI1A-209ENST00000496445 KIF4AO95239 1232 aa15.72■□□□□ 0.11
VTI1A-209ENST00000496445 NPTX2P47972 431 aa15.72■□□□□ 0.11
VTI1A-209ENST00000496445 EFNA5P52803 228 aa15.72■□□□□ 0.11
VTI1A-209ENST00000496445 PEX3P56589 373 aa15.72■□□□□ 0.11
VTI1A-209ENST00000496445 DCAF4L1Q3SXM0 396 aa15.72■□□□□ 0.11
VTI1A-209ENST00000496445 GPR149Q86SP6 731 aa15.72■□□□□ 0.11
VTI1A-209ENST00000496445 HASPINQ8TF76 798 aa15.72■□□□□ 0.11
VTI1A-209ENST00000496445 ASIC4Q96FT7 647 aa15.72■□□□□ 0.11
VTI1A-209ENST00000496445 ADPGKQ9BRR6 497 aa15.72■□□□□ 0.11
VTI1A-209ENST00000496445 ARHGAP28Q9P2N2 729 aa15.72■□□□□ 0.11
VTI1A-209ENST00000496445 SMC3Q9UQE7 1217 aa15.72■□□□□ 0.11
VTI1A-209ENST00000496445 SSX2IPQ9Y2D8 614 aa15.72■□□□□ 0.11
VTI1A-209ENST00000496445 GDAQ9Y2T3 454 aa15.72■□□□□ 0.11
VTI1A-209ENST00000496445 ZDBF2Q9HCK1 2354 aa15.72■□□□□ 0.11
VTI1A-209ENST00000496445 VWA3AA6NCI4 1184 aa15.71■□□□□ 0.11
VTI1A-209ENST00000496445 ADH1AP07327 375 aa15.71■□□□□ 0.11
VTI1A-209ENST00000496445 SIGLEC14Q08ET2 396 aa15.71■□□□□ 0.11
VTI1A-209ENST00000496445 ZRSR1Q15695 479 aaKnown RBP15.71■□□□□ 0.11
VTI1A-209ENST00000496445 USP41Q3LFD5 358 aa15.71■□□□□ 0.11
VTI1A-209ENST00000496445 TMEM119Q4V9L6 283 aa15.71■□□□□ 0.11
VTI1A-209ENST00000496445 RTP2Q5QGT7 225 aa15.71■□□□□ 0.11
VTI1A-209ENST00000496445 ATAT1Q5SQI0 421 aa15.71■□□□□ 0.11
VTI1A-209ENST00000496445 CEP120Q8N960 986 aa15.71■□□□□ 0.11
VTI1A-209ENST00000496445 PTPRHQ9HD43 1115 aa15.71■□□□□ 0.11
VTI1A-209ENST00000496445 TNFSF13BQ9Y275 285 aa15.71■□□□□ 0.11
VTI1A-209ENST00000496445 SF3B1O75533 1304 aaKnown RBP eCLIP15.7■□□□□ 0.1
VTI1A-209ENST00000496445 CCDC169A6NNP5 214 aa15.7■□□□□ 0.1
VTI1A-209ENST00000496445 ABLIM1O14639 778 aa15.7■□□□□ 0.1
VTI1A-209ENST00000496445 GLUD1P00367 558 aa15.7■□□□□ 0.1
VTI1A-209ENST00000496445 THP07101 528 aa15.7■□□□□ 0.1
VTI1A-209ENST00000496445 IGFBP6P24592 240 aaPredicted RBP15.7■□□□□ 0.1
VTI1A-209ENST00000496445 GUCY2CP25092 1073 aa15.7■□□□□ 0.1
VTI1A-209ENST00000496445 DMP1Q13316 513 aaPredicted RBP15.7■□□□□ 0.1
VTI1A-209ENST00000496445 GLRA4Q5JXX5 417 aa15.7■□□□□ 0.1
VTI1A-209ENST00000496445 BMP8AQ7Z5Y6 402 aa15.7■□□□□ 0.1
VTI1A-209ENST00000496445 TDRD5Q8NAT2 981 aaKnown RBP15.7■□□□□ 0.1
VTI1A-209ENST00000496445 CMASQ8NFW8 434 aaPredicted RBP15.7■□□□□ 0.1
VTI1A-209ENST00000496445 LRRC15Q8TF66 581 aa15.7■□□□□ 0.1
VTI1A-209ENST00000496445 RIN2Q8WYP3 895 aaPredicted RBP15.7■□□□□ 0.1
VTI1A-209ENST00000496445 DRC1Q96MC2 740 aa15.7■□□□□ 0.1
VTI1A-209ENST00000496445 PPP1R10Q96QC0 940 aaKnown RBP15.7■□□□□ 0.1
VTI1A-209ENST00000496445 PLIN2Q99541 437 aa15.7■□□□□ 0.1
VTI1A-209ENST00000496445 ACO2Q99798 780 aaKnown RBP15.7■□□□□ 0.1
VTI1A-209ENST00000496445 CDT1Q9H211 546 aa15.7■□□□□ 0.1
VTI1A-209ENST00000496445 TMEM134Q9H6X4 195 aa15.7■□□□□ 0.1
VTI1A-209ENST00000496445 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.7■□□□□ 0.1
VTI1A-209ENST00000496445 DOCK8Q8NF50 2099 aa15.7■□□□□ 0.1
VTI1A-209ENST00000496445 SPDYE4A6NLX3 237 aa15.69■□□□□ 0.1
VTI1A-209ENST00000496445 K7ERI5 159 aa15.69■□□□□ 0.1
VTI1A-209ENST00000496445 TGM5O43548 720 aa15.69■□□□□ 0.1
VTI1A-209ENST00000496445 TADA2AO75478 443 aa15.69■□□□□ 0.1
VTI1A-209ENST00000496445 RFPL2O75678 378 aa15.69■□□□□ 0.1
VTI1A-209ENST00000496445 PAPLNO95428 1278 aa15.69■□□□□ 0.1
VTI1A-209ENST00000496445 MYBP10242 640 aa15.69■□□□□ 0.1
VTI1A-209ENST00000496445 RPL17P18621 184 aaKnown RBP15.69■□□□□ 0.1
VTI1A-209ENST00000496445 PROZP22891 400 aa15.69■□□□□ 0.1
VTI1A-209ENST00000496445 SLC12A3P55017 1021 aa15.69■□□□□ 0.1
VTI1A-209ENST00000496445 RAD51AP2Q09MP3 1159 aa15.69■□□□□ 0.1
VTI1A-209ENST00000496445 CUL4AQ13619 759 aa15.69■□□□□ 0.1
VTI1A-209ENST00000496445 LARP1BQ659C4 914 aaKnown RBP15.69■□□□□ 0.1
VTI1A-209ENST00000496445 ARL6IP4Q66PJ3 421 aaKnown RBP15.69■□□□□ 0.1
VTI1A-209ENST00000496445 PRSS55Q6UWB4 352 aaPredicted RBP15.69■□□□□ 0.1
VTI1A-209ENST00000496445 C15orf39Q6ZRI6 1047 aa15.69■□□□□ 0.1
VTI1A-209ENST00000496445 GLYCTKQ8IVS8 523 aa15.69■□□□□ 0.1
VTI1A-209ENST00000496445 GPR65Q8IYL9 337 aa15.69■□□□□ 0.1
VTI1A-209ENST00000496445 ZDHHC14Q8IZN3 488 aa15.69■□□□□ 0.1
VTI1A-209ENST00000496445 KREMEN2Q8NCW0 462 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms