RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 MORC2Q9Y6X9 1032 aaPredicted RBP15.89■□□□□ 0.13
CXCL12-208ENST00000496375 ZMYM2Q9UBW7 1377 aa15.88■□□□□ 0.13
CXCL12-208ENST00000496375 GLUD1P00367 558 aa15.88■□□□□ 0.13
CXCL12-208ENST00000496375 HSP90AA1P07900 732 aaKnown RBP15.88■□□□□ 0.13
CXCL12-208ENST00000496375 MYBP10242 640 aa15.88■□□□□ 0.13
CXCL12-208ENST00000496375 RPA1P27694 616 aa15.88■□□□□ 0.13
CXCL12-208ENST00000496375 ATP2C1P98194 919 aaPredicted RBP15.88■□□□□ 0.13
CXCL12-208ENST00000496375 GRIK3Q13003 919 aa15.88■□□□□ 0.13
CXCL12-208ENST00000496375 PTGDRQ13258 359 aa15.88■□□□□ 0.13
CXCL12-208ENST00000496375 BECN1Q14457 450 aa15.88■□□□□ 0.13
CXCL12-208ENST00000496375 FUT10Q6P4F1 479 aa15.88■□□□□ 0.13
CXCL12-208ENST00000496375 PADI6Q6TGC4 694 aa15.88■□□□□ 0.13
CXCL12-208ENST00000496375 OTOP3Q7RTS5 596 aa15.88■□□□□ 0.13
CXCL12-208ENST00000496375 CMASQ8NFW8 434 aaPredicted RBP15.88■□□□□ 0.13
CXCL12-208ENST00000496375 BSNDQ8WZ55 320 aa15.88■□□□□ 0.13
CXCL12-208ENST00000496375 RABGGTAQ92696 567 aa15.88■□□□□ 0.13
CXCL12-208ENST00000496375 B3GALT6Q96L58 329 aa15.88■□□□□ 0.13
CXCL12-208ENST00000496375 GPR62Q9BZJ7 368 aa15.88■□□□□ 0.13
CXCL12-208ENST00000496375 FZD8Q9H461 694 aa15.88■□□□□ 0.13
CXCL12-208ENST00000496375 CHST7Q9NS84 486 aa15.88■□□□□ 0.13
CXCL12-208ENST00000496375 DPP7Q9UHL4 492 aa15.88■□□□□ 0.13
CXCL12-208ENST00000496375 ADAM28Q9UKQ2 775 aa15.88■□□□□ 0.13
CXCL12-208ENST00000496375 CCDC195A0A1B0GUA6 201 aa15.87■□□□□ 0.13
CXCL12-208ENST00000496375 ARHGEF35A5YM69 484 aa15.87■□□□□ 0.13
CXCL12-208ENST00000496375 TTLL13PA6NNM8 815 aa15.87■□□□□ 0.13
CXCL12-208ENST00000496375 BMP15O95972 392 aa15.87■□□□□ 0.13
CXCL12-208ENST00000496375 CYP11B2P19099 503 aa15.87■□□□□ 0.13
CXCL12-208ENST00000496375 FAM187BQ17R55 369 aa15.87■□□□□ 0.13
CXCL12-208ENST00000496375 USP41Q3LFD5 358 aa15.87■□□□□ 0.13
CXCL12-208ENST00000496375 ARL6IP4Q66PJ3 421 aaKnown RBP15.87■□□□□ 0.13
CXCL12-208ENST00000496375 ELMSAN1Q6PJG2 1045 aa15.87■□□□□ 0.13
CXCL12-208ENST00000496375 PALB2Q86YC2 1186 aa15.87■□□□□ 0.13
CXCL12-208ENST00000496375 IGSF22Q8N9C0 903 aa15.87■□□□□ 0.13
CXCL12-208ENST00000496375 C2orf40Q9H1Z8 148 aa15.87■□□□□ 0.13
CXCL12-208ENST00000496375 PDZD7Q9H5P4 517 aa15.87■□□□□ 0.13
CXCL12-208ENST00000496375 CACNG4Q9UBN1 327 aa15.87■□□□□ 0.13
CXCL12-208ENST00000496375 N4BP3O15049 544 aa15.86■□□□□ 0.13
CXCL12-208ENST00000496375 TADA2AO75478 443 aa15.86■□□□□ 0.13
CXCL12-208ENST00000496375 PRKCBP05771 671 aa15.86■□□□□ 0.13
CXCL12-208ENST00000496375 SPATA31D3P0C874 917 aa15.86■□□□□ 0.13
CXCL12-208ENST00000496375 LIG1P18858 919 aa15.86■□□□□ 0.13
CXCL12-208ENST00000496375 PRPF4BQ13523 1007 aaKnown RBP15.86■□□□□ 0.13
CXCL12-208ENST00000496375 PDIA5Q14554 519 aa15.86■□□□□ 0.13
CXCL12-208ENST00000496375 MAPK6Q16659 721 aa15.86■□□□□ 0.13
CXCL12-208ENST00000496375 TMEM132AQ24JP5 1023 aa15.86■□□□□ 0.13
CXCL12-208ENST00000496375 HAUS3Q68CZ6 603 aa15.86■□□□□ 0.13
CXCL12-208ENST00000496375 SPATA31D4Q6ZUB0 917 aa15.86■□□□□ 0.13
CXCL12-208ENST00000496375 GLYCTKQ8IVS8 523 aa15.86■□□□□ 0.13
CXCL12-208ENST00000496375 DEPTORQ8TB45 409 aa15.86■□□□□ 0.13
CXCL12-208ENST00000496375 RIN2Q8WYP3 895 aaPredicted RBP15.86■□□□□ 0.13
CXCL12-208ENST00000496375 PAAF1Q9BRP4 392 aa15.86■□□□□ 0.13
CXCL12-208ENST00000496375 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.86■□□□□ 0.13
CXCL12-208ENST00000496375 FAM86C1Q9NVL1 165 aa15.86■□□□□ 0.13
CXCL12-208ENST00000496375 SNTG2Q9NY99 539 aa15.86■□□□□ 0.13
CXCL12-208ENST00000496375 USP20Q9Y2K6 914 aa15.86■□□□□ 0.13
CXCL12-208ENST00000496375 CACNA1HO95180 2353 aa15.86■□□□□ 0.13
CXCL12-208ENST00000496375 MYO15AQ9UKN7 3530 aa15.86■□□□□ 0.13
CXCL12-208ENST00000496375 MTCL1Q9Y4B5 1905 aaKnown RBP15.86■□□□□ 0.13
CXCL12-208ENST00000496375 DMDP11532 3685 aa15.86■□□□□ 0.13
CXCL12-208ENST00000496375 TGM5O43548 720 aa15.85■□□□□ 0.13
CXCL12-208ENST00000496375 RFPL2O75678 378 aa15.85■□□□□ 0.13
CXCL12-208ENST00000496375 RPL17P18621 184 aaKnown RBP15.85■□□□□ 0.13
CXCL12-208ENST00000496375 MUTP22033 750 aa15.85■□□□□ 0.13
CXCL12-208ENST00000496375 NAMPTP43490 491 aa15.85■□□□□ 0.13
CXCL12-208ENST00000496375 NUBP1P53384 320 aa15.85■□□□□ 0.13
CXCL12-208ENST00000496375 TUSC3Q13454 348 aa15.85■□□□□ 0.13
CXCL12-208ENST00000496375 TDGQ13569 410 aa15.85■□□□□ 0.13
CXCL12-208ENST00000496375 HSP90AA2PQ14568 343 aaPredicted RBP15.85■□□□□ 0.13
CXCL12-208ENST00000496375 ECM1Q16610 540 aa15.85■□□□□ 0.13
CXCL12-208ENST00000496375 CYP26C1Q6V0L0 522 aa15.85■□□□□ 0.13
CXCL12-208ENST00000496375 TMEM105Q8N8V8 129 aa15.85■□□□□ 0.13
CXCL12-208ENST00000496375 HASPINQ8TF76 798 aa15.85■□□□□ 0.13
CXCL12-208ENST00000496375 HDAC7Q8WUI4 952 aa15.85■□□□□ 0.13
CXCL12-208ENST00000496375 SMG7Q92540 1137 aaKnown RBP15.85■□□□□ 0.13
CXCL12-208ENST00000496375 ADPGKQ9BRR6 497 aa15.85■□□□□ 0.13
CXCL12-208ENST00000496375 CCDC113Q9H0I3 377 aa15.85■□□□□ 0.13
CXCL12-208ENST00000496375 MFSD1Q9H3U5 465 aa15.85■□□□□ 0.13
CXCL12-208ENST00000496375 KCNK12Q9HB15 430 aa15.85■□□□□ 0.13
CXCL12-208ENST00000496375 WDR6Q9NNW5 1121 aaKnown RBP15.85■□□□□ 0.13
CXCL12-208ENST00000496375 FNIP2Q9P278 1114 aa15.85■□□□□ 0.13
CXCL12-208ENST00000496375 SF3B1O75533 1304 aaKnown RBP eCLIP15.85■□□□□ 0.13
CXCL12-208ENST00000496375 CASTOR2A6NHX0 329 aa15.84■□□□□ 0.13
CXCL12-208ENST00000496375 ACKR2O00590 384 aa15.84■□□□□ 0.13
CXCL12-208ENST00000496375 PTGESO14684 152 aa15.84■□□□□ 0.13
CXCL12-208ENST00000496375 GALR2O43603 387 aaPredicted RBP15.84■□□□□ 0.13
CXCL12-208ENST00000496375 N4BP1O75113 896 aaKnown RBP15.84■□□□□ 0.13
CXCL12-208ENST00000496375 RECQL4O94761 1208 aa15.84■□□□□ 0.13
CXCL12-208ENST00000496375 EDN1P05305 212 aa15.84■□□□□ 0.13
CXCL12-208ENST00000496375 ZSCAN22P10073 491 aaPredicted RBP15.84■□□□□ 0.13
CXCL12-208ENST00000496375 GBP2P32456 591 aaPredicted RBP15.84■□□□□ 0.13
CXCL12-208ENST00000496375 CCT6AP40227 531 aaKnown RBP15.84■□□□□ 0.13
CXCL12-208ENST00000496375 PPP2R5AQ15172 486 aa15.84■□□□□ 0.13
CXCL12-208ENST00000496375 IL17AQ16552 155 aa15.84■□□□□ 0.13
CXCL12-208ENST00000496375 GPR65Q8IYL9 337 aa15.84■□□□□ 0.13
CXCL12-208ENST00000496375 ATOH1Q92858 354 aaPredicted RBP15.84■□□□□ 0.13
CXCL12-208ENST00000496375 ZNF707Q96C28 371 aaPredicted RBP15.84■□□□□ 0.13
CXCL12-208ENST00000496375 KIFC3Q9BVG8 833 aa15.84■□□□□ 0.13
CXCL12-208ENST00000496375 RHOBTB2Q9BYZ6 727 aa15.84■□□□□ 0.13
CXCL12-208ENST00000496375 IRF2BPLQ9H1B7 796 aa15.84■□□□□ 0.13
CXCL12-208ENST00000496375 CXCL16Q9H2A7 254 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms