RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 MYEOVQ96EZ4 313 aa4.99□□□□□ -1.61
CLK1-214ENST00000496205 CPEB1Q9BZB8 566 aaKnown RBP4.99□□□□□ -1.61
CLK1-214ENST00000496205 WDR11Q9BZH6 1224 aa4.99□□□□□ -1.61
CLK1-214ENST00000496205 KCNH6Q9H252 994 aa4.99□□□□□ -1.61
CLK1-214ENST00000496205 MSRAQ9UJ68 235 aa4.99□□□□□ -1.61
CLK1-214ENST00000496205 ELL2O00472 640 aaPredicted RBP4.98□□□□□ -1.61
CLK1-214ENST00000496205 TRIM24O15164 1050 aa4.98□□□□□ -1.61
CLK1-214ENST00000496205 PPFIA4O75335 1185 aa4.98□□□□□ -1.61
CLK1-214ENST00000496205 RECQL4O94761 1208 aa4.98□□□□□ -1.61
CLK1-214ENST00000496205 ERBB2P04626 1255 aa4.98□□□□□ -1.61
CLK1-214ENST00000496205 CLEC2LP0C7M8 214 aa4.98□□□□□ -1.61
CLK1-214ENST00000496205 RBP3P10745 1247 aa4.98□□□□□ -1.61
CLK1-214ENST00000496205 FNTBP49356 437 aa4.98□□□□□ -1.61
CLK1-214ENST00000496205 TAP1Q03518 808 aa4.98□□□□□ -1.61
CLK1-214ENST00000496205 EPHA7Q15375 998 aa4.98□□□□□ -1.61
CLK1-214ENST00000496205 FBXO42Q6P3S6 717 aa4.98□□□□□ -1.61
CLK1-214ENST00000496205 BMP8AQ7Z5Y6 402 aa4.98□□□□□ -1.61
CLK1-214ENST00000496205 E2F7Q96AV8 911 aa4.98□□□□□ -1.61
CLK1-214ENST00000496205 FAXDC2Q96IV6 333 aa4.98□□□□□ -1.61
CLK1-214ENST00000496205 POFUT1Q9H488 388 aa4.98□□□□□ -1.61
CLK1-214ENST00000496205 C14orf93Q9H972 538 aaKnown RBP4.98□□□□□ -1.61
CLK1-214ENST00000496205 ACSS2Q9NR19 701 aa4.98□□□□□ -1.61
CLK1-214ENST00000496205 CCM2LQ9NUG4 571 aaPredicted RBP4.98□□□□□ -1.61
CLK1-214ENST00000496205 SLC52A1Q9NWF4 448 aa4.98□□□□□ -1.61
CLK1-214ENST00000496205 SYBUQ9NX95 663 aa4.98□□□□□ -1.61
CLK1-214ENST00000496205 GABBR1Q9UBS5 961 aa4.98□□□□□ -1.61
CLK1-214ENST00000496205 IP6K2Q9UHH9 426 aa4.98□□□□□ -1.61
CLK1-214ENST00000496205 NOB1Q9ULX3 412 aaKnown RBP4.98□□□□□ -1.61
CLK1-214ENST00000496205 PPP2R3BQ9Y5P8 575 aa4.98□□□□□ -1.61
CLK1-214ENST00000496205 EPN1Q9Y6I3 576 aaPredicted RBP4.98□□□□□ -1.61
CLK1-214ENST00000496205 COL11A2P13942 1736 aaPredicted RBP4.97□□□□□ -1.61
CLK1-214ENST00000496205 TMEM200CA6NKL6 621 aa4.97□□□□□ -1.61
CLK1-214ENST00000496205 GOLGA8AA7E2F4 631 aa4.97□□□□□ -1.61
CLK1-214ENST00000496205 ZNF185O15231 689 aa4.97□□□□□ -1.61
CLK1-214ENST00000496205 DAPK3O43293 454 aa4.97□□□□□ -1.61
CLK1-214ENST00000496205 HOXA3O43365 443 aaPredicted RBP4.97□□□□□ -1.61
CLK1-214ENST00000496205 ZRANB2O95218 330 aaKnown RBP eCLIP4.97□□□□□ -1.61
CLK1-214ENST00000496205 CYP17A1P05093 508 aa4.97□□□□□ -1.61
CLK1-214ENST00000496205 MYBPC3Q14896 1274 aa4.97□□□□□ -1.61
CLK1-214ENST00000496205 CT83Q5H943 113 aa4.97□□□□□ -1.61
CLK1-214ENST00000496205 UNQ6494/PRO21346Q6UXR6 183 aa4.97□□□□□ -1.61
CLK1-214ENST00000496205 BHLHA9Q7RTU4 235 aa4.97□□□□□ -1.61
CLK1-214ENST00000496205 C14orf80Q86SX3 495 aa4.97□□□□□ -1.61
CLK1-214ENST00000496205 PASD1Q8IV76 773 aa4.97□□□□□ -1.61
CLK1-214ENST00000496205 WDR75Q8IWA0 830 aaKnown RBP4.97□□□□□ -1.61
CLK1-214ENST00000496205 LILRA3Q8N6C8 439 aaPredicted RBP4.97□□□□□ -1.61
CLK1-214ENST00000496205 FAM193BQ96PV7 902 aaPredicted RBP4.97□□□□□ -1.61
CLK1-214ENST00000496205 ORAI2Q96SN7 254 aa4.97□□□□□ -1.61
CLK1-214ENST00000496205 CPPED1Q9BRF8 314 aaPredicted RBP4.97□□□□□ -1.61
CLK1-214ENST00000496205 SLC13A1Q9BZW2 595 aa4.97□□□□□ -1.61
CLK1-214ENST00000496205 ENKD1Q9H0I2 346 aa4.97□□□□□ -1.61
CLK1-214ENST00000496205 TCEAL9Q9UHQ7 104 aa4.97□□□□□ -1.61
CLK1-214ENST00000496205 EIF2B4Q9UI10 523 aaKnown RBP4.97□□□□□ -1.61
CLK1-214ENST00000496205 LUC7L2Q9Y383 392 aaKnown RBP4.97□□□□□ -1.61
CLK1-214ENST00000496205 NOC2LQ9Y3T9 749 aaKnown RBP4.97□□□□□ -1.61
CLK1-214ENST00000496205 UBA6A0AVT1 1052 aaPredicted RBP4.96□□□□□ -1.62
CLK1-214ENST00000496205 TRIM75PA6NK02 468 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 MTSS1O43312 755 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 GYPEP15421 78 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 TYRP1P17643 537 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 CD40P25942 277 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 APOBEC3AP31941 199 aaPredicted RBP4.96□□□□□ -1.62
CLK1-214ENST00000496205 USP14P54578 494 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 MANFP55145 182 aaKnown RBP4.96□□□□□ -1.62
CLK1-214ENST00000496205 SRSF2Q01130 221 aaKnown RBP4.96□□□□□ -1.62
CLK1-214ENST00000496205 FOXI1Q12951 378 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 TTC38Q5R3I4 469 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 PRAMEF9Q5VWM5 478 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 CCDC62Q6P9F0 684 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 FRMD7Q6ZUT3 714 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 LYSMD2Q8IV50 215 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 TPH2Q8IWU9 490 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 SUPT20HQ8NEM7 779 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 OR52N2Q8NGI0 321 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 JPH3Q8WXH2 748 aaPredicted RBP4.96□□□□□ -1.62
CLK1-214ENST00000496205 SOX7Q9BT81 388 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 SLC46A2Q9BY10 475 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 ANO3Q9BYT9 981 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 ING3Q9NXR8 418 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 DKK2Q9UBU2 259 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 ZNF180Q9UJW8 692 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 TMPRSS11EQ9UL52 423 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 EDARQ9UNE0 448 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 SPATA31A6Q5VVP1 1343 aa4.96□□□□□ -1.62
CLK1-214ENST00000496205 PRSS38A1L453 326 aa4.95□□□□□ -1.62
CLK1-214ENST00000496205 CDK4P11802 303 aa4.95□□□□□ -1.62
CLK1-214ENST00000496205 ZSCAN20P17040 1043 aaPredicted RBP4.95□□□□□ -1.62
CLK1-214ENST00000496205 PITRM1Q5JRX3 1037 aa4.95□□□□□ -1.62
CLK1-214ENST00000496205 PGM2L1Q6PCE3 622 aa4.95□□□□□ -1.62
CLK1-214ENST00000496205 ARHGEF19Q8IW93 802 aa4.95□□□□□ -1.62
CLK1-214ENST00000496205 CMTR2Q8IYT2 770 aaKnown RBP4.95□□□□□ -1.62
CLK1-214ENST00000496205 CHPFQ8IZ52 775 aa4.95□□□□□ -1.62
CLK1-214ENST00000496205 CPA6Q8N4T0 437 aa4.95□□□□□ -1.62
CLK1-214ENST00000496205 FAM98AQ8NCA5 519 aaKnown RBP4.95□□□□□ -1.62
CLK1-214ENST00000496205 EAF2Q96CJ1 260 aaPredicted RBP4.95□□□□□ -1.62
CLK1-214ENST00000496205 C8orf48Q96LL4 319 aa4.95□□□□□ -1.62
CLK1-214ENST00000496205 TUBGCP5Q96RT8 1024 aa4.95□□□□□ -1.62
CLK1-214ENST00000496205 NDC1Q9BTX1 674 aa4.95□□□□□ -1.62
CLK1-214ENST00000496205 MYL10Q9BUA6 226 aa4.95□□□□□ -1.62
CLK1-214ENST00000496205 LSM14BQ9BX40 385 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms