RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 UBA7P41226 1012 aa26.64■■□□□ 1.86
HLA-C-209ENST00000495835 GLUD2P49448 558 aa26.64■■□□□ 1.86
HLA-C-209ENST00000495835 CLCN4P51793 760 aa26.64■■□□□ 1.86
HLA-C-209ENST00000495835 SMTNP53814 917 aa26.64■■□□□ 1.86
HLA-C-209ENST00000495835 SLC12A3P55017 1021 aa26.64■■□□□ 1.86
HLA-C-209ENST00000495835 DSG1Q02413 1049 aa26.64■■□□□ 1.86
HLA-C-209ENST00000495835 ZRSR1Q15695 479 aaKnown RBP26.64■■□□□ 1.86
HLA-C-209ENST00000495835 USP41Q3LFD5 358 aa26.64■■□□□ 1.86
HLA-C-209ENST00000495835 EEF1DP3Q658K8 133 aa26.64■■□□□ 1.86
HLA-C-209ENST00000495835 ACO2Q99798 780 aaKnown RBP26.64■■□□□ 1.86
HLA-C-209ENST00000495835 MRPL4Q9BYD3 311 aaKnown RBP26.64■■□□□ 1.86
HLA-C-209ENST00000495835 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.64■■□□□ 1.86
HLA-C-209ENST00000495835 NR2E1Q9Y466 385 aa26.64■■□□□ 1.86
HLA-C-209ENST00000495835 ADH1AP07327 375 aa26.63■■□□□ 1.85
HLA-C-209ENST00000495835 EPCAMP16422 314 aa26.63■■□□□ 1.85
HLA-C-209ENST00000495835 ELMSAN1Q6PJG2 1045 aa26.63■■□□□ 1.85
HLA-C-209ENST00000495835 PTPRHQ9HD43 1115 aa26.63■■□□□ 1.85
HLA-C-209ENST00000495835 ARIH1Q9Y4X5 557 aaPredicted RBP26.63■■□□□ 1.85
HLA-C-209ENST00000495835 PTGESO14684 152 aa26.62■■□□□ 1.85
HLA-C-209ENST00000495835 SSBP05455 408 aaKnown RBP eCLIP26.62■■□□□ 1.85
HLA-C-209ENST00000495835 PLA2G4BP0C869 781 aa26.62■■□□□ 1.85
HLA-C-209ENST00000495835 PLS3P13797 630 aa26.62■■□□□ 1.85
HLA-C-209ENST00000495835 SCP2P22307 547 aa26.62■■□□□ 1.85
HLA-C-209ENST00000495835 CREMQ03060 361 aa26.62■■□□□ 1.85
HLA-C-209ENST00000495835 HSP90AA2PQ14568 343 aaPredicted RBP26.62■■□□□ 1.85
HLA-C-209ENST00000495835 ATAT1Q5SQI0 421 aa26.62■■□□□ 1.85
HLA-C-209ENST00000495835 KIAA1841Q6NSI8 718 aa26.62■■□□□ 1.85
HLA-C-209ENST00000495835 FUT10Q6P4F1 479 aa26.62■■□□□ 1.85
HLA-C-209ENST00000495835 TAS1R1Q7RTX1 841 aa26.62■■□□□ 1.85
HLA-C-209ENST00000495835 HDAC7Q8WUI4 952 aa26.62■■□□□ 1.85
HLA-C-209ENST00000495835 KCNN1Q92952 543 aa26.62■■□□□ 1.85
HLA-C-209ENST00000495835 RPGRIP1Q96KN7 1286 aa26.62■■□□□ 1.85
HLA-C-209ENST00000495835 FBXL18Q96ME1 805 aa26.62■■□□□ 1.85
HLA-C-209ENST00000495835 FNIP2Q9P278 1114 aa26.62■■□□□ 1.85
HLA-C-209ENST00000495835 VPS37CA5D8V6 355 aaPredicted RBP26.61■■□□□ 1.85
HLA-C-209ENST00000495835 H0YCG3 227 aa26.61■■□□□ 1.85
HLA-C-209ENST00000495835 TADA2AO75478 443 aa26.61■■□□□ 1.85
HLA-C-209ENST00000495835 SF3A1Q15459 793 aaKnown RBP26.61■■□□□ 1.85
HLA-C-209ENST00000495835 NAB2Q15742 525 aa26.61■■□□□ 1.85
HLA-C-209ENST00000495835 SFXN1Q9H9B4 322 aa26.61■■□□□ 1.85
HLA-C-209ENST00000495835 LARSQ9P2J5 1176 aaKnown RBP26.61■■□□□ 1.85
HLA-C-209ENST00000495835 ODF2LQ9ULJ1 636 aa26.61■■□□□ 1.85
HLA-C-209ENST00000495835 USP20Q9Y2K6 914 aa26.61■■□□□ 1.85
HLA-C-209ENST00000495835 BRD1O95696 1058 aa26.6■■□□□ 1.85
HLA-C-209ENST00000495835 GRM5P41594 1212 aa26.6■■□□□ 1.85
HLA-C-209ENST00000495835 ELAVL2Q12926 359 aaKnown RBP26.6■■□□□ 1.85
HLA-C-209ENST00000495835 CYP26C1Q6V0L0 522 aa26.6■■□□□ 1.85
HLA-C-209ENST00000495835 TAS1R3Q7RTX0 852 aa26.6■■□□□ 1.85
HLA-C-209ENST00000495835 EDAQ92838 391 aa26.6■■□□□ 1.85
HLA-C-209ENST00000495835 CCDC94Q9BW85 323 aaPredicted RBP26.6■■□□□ 1.85
HLA-C-209ENST00000495835 APOL5Q9BWW9 433 aa26.6■■□□□ 1.85
HLA-C-209ENST00000495835 GPR62Q9BZJ7 368 aa26.6■■□□□ 1.85
HLA-C-209ENST00000495835 TOPORSQ9NS56 1045 aaPredicted RBP26.6■■□□□ 1.85
HLA-C-209ENST00000495835 MUTYHQ9UIF7 546 aa26.6■■□□□ 1.85
HLA-C-209ENST00000495835 SF3B1O75533 1304 aaKnown RBP eCLIP26.6■■□□□ 1.85
HLA-C-209ENST00000495835 SFI1A8K8P3 1242 aa26.59■■□□□ 1.85
HLA-C-209ENST00000495835 C2CD2LO14523 706 aa26.59■■□□□ 1.85
HLA-C-209ENST00000495835 TEX28O15482 410 aa26.59■■□□□ 1.85
HLA-C-209ENST00000495835 MCF2P10911 925 aa26.59■■□□□ 1.85
HLA-C-209ENST00000495835 SYT1P21579 422 aa26.59■■□□□ 1.85
HLA-C-209ENST00000495835 PROZP22891 400 aa26.59■■□□□ 1.85
HLA-C-209ENST00000495835 YARSP54577 528 aaKnown RBP26.59■■□□□ 1.85
HLA-C-209ENST00000495835 STRN3Q13033 797 aa26.59■■□□□ 1.85
HLA-C-209ENST00000495835 RARS2Q5T160 578 aaKnown RBP26.59■■□□□ 1.85
HLA-C-209ENST00000495835 C15orf39Q6ZRI6 1047 aa26.59■■□□□ 1.85
HLA-C-209ENST00000495835 CMASQ8NFW8 434 aaPredicted RBP26.59■■□□□ 1.85
HLA-C-209ENST00000495835 UROC1Q96N76 676 aa26.59■■□□□ 1.85
HLA-C-209ENST00000495835 RHOBTB2Q9BYZ6 727 aa26.59■■□□□ 1.85
HLA-C-209ENST00000495835 GDAQ9Y2T3 454 aa26.59■■□□□ 1.85
HLA-C-209ENST00000495835 F8W810 466 aa26.58■■□□□ 1.85
HLA-C-209ENST00000495835 K7ELQ4 463 aaPredicted RBP26.58■■□□□ 1.85
HLA-C-209ENST00000495835 SLC16A4O15374 487 aa26.58■■□□□ 1.85
HLA-C-209ENST00000495835 XKR4Q5GH76 650 aa26.58■■□□□ 1.85
HLA-C-209ENST00000495835 GPR149Q86SP6 731 aa26.58■■□□□ 1.85
HLA-C-209ENST00000495835 TMEM161BQ8NDZ6 487 aa26.58■■□□□ 1.85
HLA-C-209ENST00000495835 PLIN2Q99541 437 aa26.58■■□□□ 1.85
HLA-C-209ENST00000495835 TARS2Q9BW92 718 aaKnown RBP26.58■■□□□ 1.85
HLA-C-209ENST00000495835 CCSER1Q9C0I3 900 aa26.58■■□□□ 1.85
HLA-C-209ENST00000495835 CDT1Q9H211 546 aa26.58■■□□□ 1.85
HLA-C-209ENST00000495835 POMKQ9H5K3 350 aa26.58■■□□□ 1.85
HLA-C-209ENST00000495835 USTQ9Y2C2 406 aa26.58■■□□□ 1.85
HLA-C-209ENST00000495835 MORC2Q9Y6X9 1032 aaPredicted RBP26.58■■□□□ 1.85
HLA-C-209ENST00000495835 MTCL1Q9Y4B5 1905 aaKnown RBP26.57■■□□□ 1.84
HLA-C-209ENST00000495835 TRIP11Q15643 1979 aa26.57■■□□□ 1.84
HLA-C-209ENST00000495835 TMEM189-UBE2V1I3L0A0 370 aa26.57■■□□□ 1.84
HLA-C-209ENST00000495835 ZNF568Q3ZCX4 644 aa26.57■■□□□ 1.84
HLA-C-209ENST00000495835 ARSHQ5FYA8 562 aa26.57■■□□□ 1.84
HLA-C-209ENST00000495835 PDXDC1Q6P996 788 aa26.57■■□□□ 1.84
HLA-C-209ENST00000495835 MPZL3Q6UWV2 235 aa26.57■■□□□ 1.84
HLA-C-209ENST00000495835 ALKAL1Q6UXT8 129 aa26.57■■□□□ 1.84
HLA-C-209ENST00000495835 ZPBP2Q6X784 338 aa26.57■■□□□ 1.84
HLA-C-209ENST00000495835 PPP1R10Q96QC0 940 aaKnown RBP26.57■■□□□ 1.84
HLA-C-209ENST00000495835 TCHPQ9BT92 498 aa26.57■■□□□ 1.84
HLA-C-209ENST00000495835 PLEKHA4Q9H4M7 779 aa26.57■■□□□ 1.84
HLA-C-209ENST00000495835 FAM86C2PA6NEL3 165 aa26.56■■□□□ 1.84
HLA-C-209ENST00000495835 TOM1L1O75674 476 aa26.56■■□□□ 1.84
HLA-C-209ENST00000495835 PAPLNO95428 1278 aa26.56■■□□□ 1.84
HLA-C-209ENST00000495835 GLUD1P00367 558 aa26.56■■□□□ 1.84
HLA-C-209ENST00000495835 MAPTP10636 758 aaKnown RBP26.56■■□□□ 1.84
HLA-C-209ENST00000495835 ABCD1P33897 745 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms