RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 TMEM132AQ24JP5 1023 aa7.94□□□□□ -1.14
VPS52-221ENST00000495755 TMEM119Q4V9L6 283 aa7.94□□□□□ -1.14
VPS52-221ENST00000495755 RARS2Q5T160 578 aaKnown RBP7.94□□□□□ -1.14
VPS52-221ENST00000495755 KIAA1841Q6NSI8 718 aa7.94□□□□□ -1.14
VPS52-221ENST00000495755 TAS1R3Q7RTX0 852 aa7.94□□□□□ -1.14
VPS52-221ENST00000495755 BRAPQ7Z569 592 aa7.94□□□□□ -1.14
VPS52-221ENST00000495755 CABP7Q86V35 215 aa7.94□□□□□ -1.14
VPS52-221ENST00000495755 SYT2Q8N9I0 419 aaPredicted RBP7.94□□□□□ -1.14
VPS52-221ENST00000495755 FEZF2Q8TBJ5 459 aa7.94□□□□□ -1.14
VPS52-221ENST00000495755 SPIRE2Q8WWL2 714 aa7.94□□□□□ -1.14
VPS52-221ENST00000495755 RABGGTAQ92696 567 aa7.94□□□□□ -1.14
VPS52-221ENST00000495755 AK8Q96MA6 479 aa7.94□□□□□ -1.14
VPS52-221ENST00000495755 DRC1Q96MC2 740 aa7.94□□□□□ -1.14
VPS52-221ENST00000495755 RIPOR3Q96MK2 946 aa7.94□□□□□ -1.14
VPS52-221ENST00000495755 ACO2Q99798 780 aaKnown RBP7.94□□□□□ -1.14
VPS52-221ENST00000495755 PAAF1Q9BRP4 392 aa7.94□□□□□ -1.14
VPS52-221ENST00000495755 ADPGKQ9BRR6 497 aa7.94□□□□□ -1.14
VPS52-221ENST00000495755 NT5C3AQ9H0P0 336 aa7.94□□□□□ -1.14
VPS52-221ENST00000495755 POMKQ9H5K3 350 aa7.94□□□□□ -1.14
VPS52-221ENST00000495755 ARHGAP28Q9P2N2 729 aa7.94□□□□□ -1.14
VPS52-221ENST00000495755 CACNG4Q9UBN1 327 aa7.94□□□□□ -1.14
VPS52-221ENST00000495755 ADAM28Q9UKQ2 775 aa7.94□□□□□ -1.14
VPS52-221ENST00000495755 RBM19Q9Y4C8 960 aaKnown RBP7.94□□□□□ -1.14
VPS52-221ENST00000495755 ARIH1Q9Y4X5 557 aaPredicted RBP7.94□□□□□ -1.14
VPS52-221ENST00000495755 PHLPP2Q6ZVD8 1323 aa7.94□□□□□ -1.14
VPS52-221ENST00000495755 SFI1A8K8P3 1242 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 ABLIM1O14639 778 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 SLC16A4O15374 487 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 TADA2AO75478 443 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 KIF4AO95239 1232 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 PAPLNO95428 1278 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 BRD1O95696 1058 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 BMP15O95972 392 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 THP07101 528 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 ADH1AP07327 375 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 PLA2G4BP0C869 781 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 PLS3P13797 630 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 PROZP22891 400 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 ZXDAP98168 799 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 DMP1Q13316 513 aaPredicted RBP7.93□□□□□ -1.14
VPS52-221ENST00000495755 ZRSR1Q15695 479 aaKnown RBP7.93□□□□□ -1.14
VPS52-221ENST00000495755 USP41Q3LFD5 358 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 ARSHQ5FYA8 562 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 XKR4Q5GH76 650 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 ATAT1Q5SQI0 421 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 FUT10Q6P4F1 479 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 LILRA6Q6PI73 481 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 ALKAL1Q6UXT8 129 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 TMC5Q6UXY8 1006 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 TRIM67Q6ZTA4 783 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 GPR149Q86SP6 731 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 CMASQ8NFW8 434 aaPredicted RBP7.93□□□□□ -1.14
VPS52-221ENST00000495755 LRRC15Q8TF66 581 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 B3GALT6Q96L58 329 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 PPP1R10Q96QC0 940 aaKnown RBP7.93□□□□□ -1.14
VPS52-221ENST00000495755 PLIN2Q99541 437 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 TARS2Q9BW92 718 aaKnown RBP7.93□□□□□ -1.14
VPS52-221ENST00000495755 MRPL4Q9BYD3 311 aaKnown RBP7.93□□□□□ -1.14
VPS52-221ENST00000495755 CDT1Q9H211 546 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 SFXN1Q9H9B4 322 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 KMT5AQ9NQR1 393 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 KCND2Q9NZV8 630 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 FNIP2Q9P278 1114 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 KCNG1Q9UIX4 513 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 GDAQ9Y2T3 454 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 NR2E1Q9Y466 385 aa7.93□□□□□ -1.14
VPS52-221ENST00000495755 WDR87Q6ZQQ6 2873 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 TDRD15B5MCY1 1934 aaKnown RBP7.92□□□□□ -1.14
VPS52-221ENST00000495755 NPHP3-ACAD11A0A0J9YXS1 232 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 SMIM28A0A1B0GU29 152 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 CASTOR2A6NHX0 329 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 C2CD4DB7Z1M9 353 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 MAPTP10636 758 aaKnown RBP7.92□□□□□ -1.14
VPS52-221ENST00000495755 MCF2P10911 925 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 PDCP20941 246 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 SYT1P21579 422 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 IGFBP6P24592 240 aaPredicted RBP7.92□□□□□ -1.14
VPS52-221ENST00000495755 LONP1P36776 959 aaKnown RBP7.92□□□□□ -1.14
VPS52-221ENST00000495755 UBA7P41226 1012 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 GRM5P41594 1212 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 GRIN1Q05586 938 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 RAD51AP2Q09MP3 1159 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 PTPAQ15257 358 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 SF3A1Q15459 793 aaKnown RBP7.92□□□□□ -1.14
VPS52-221ENST00000495755 PTPN21Q16825 1174 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 CD300LGQ6UXG3 332 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 CYP26C1Q6V0L0 522 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 C15orf39Q6ZRI6 1047 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 HFE2Q6ZVN8 426 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 APBB1IPQ7Z5R6 666 aaPredicted RBP7.92□□□□□ -1.14
VPS52-221ENST00000495755 BMP8AQ7Z5Y6 402 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 ZDHHC14Q8IZN3 488 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 CEP120Q8N960 986 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 TMEM161BQ8NDZ6 487 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 LNX1Q8TBB1 728 aaPredicted RBP7.92□□□□□ -1.14
VPS52-221ENST00000495755 HDAC7Q8WUI4 952 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 RIN2Q8WYP3 895 aaPredicted RBP7.92□□□□□ -1.14
VPS52-221ENST00000495755 KCNN1Q92952 543 aa7.92□□□□□ -1.14
VPS52-221ENST00000495755 INTS4Q96HW7 963 aaKnown RBP7.92□□□□□ -1.14
VPS52-221ENST00000495755 CDK5RAP3Q96JB5 506 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms