RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 GCNT4Q9P109 453 aa17.66■□□□□ 0.42
CBX4-204ENST00000495122 SEPT9Q9UHD8 586 aaPredicted RBP17.66■□□□□ 0.42
CBX4-204ENST00000495122 TBX20Q9UMR3 447 aa17.66■□□□□ 0.42
CBX4-204ENST00000495122 TRANK1O15050 2925 aa17.66■□□□□ 0.42
CBX4-204ENST00000495122 REV3LO60673 3130 aa17.65■□□□□ 0.42
CBX4-204ENST00000495122 DLL1O00548 723 aa17.65■□□□□ 0.42
CBX4-204ENST00000495122 KPNA6O60684 536 aa17.65■□□□□ 0.42
CBX4-204ENST00000495122 FERP16591 822 aa17.65■□□□□ 0.42
CBX4-204ENST00000495122 GARTP22102 1010 aa17.65■□□□□ 0.42
CBX4-204ENST00000495122 SLC26A2P50443 739 aa17.65■□□□□ 0.42
CBX4-204ENST00000495122 CYP2J2P51589 502 aa17.65■□□□□ 0.42
CBX4-204ENST00000495122 NPEPPSP55786 919 aa17.65■□□□□ 0.42
CBX4-204ENST00000495122 ARHGAP1Q07960 439 aa17.65■□□□□ 0.42
CBX4-204ENST00000495122 WHAMMP3Q1A5X7 153 aa17.65■□□□□ 0.42
CBX4-204ENST00000495122 CYFIP1Q7L576 1253 aa17.65■□□□□ 0.42
CBX4-204ENST00000495122 VPS36Q86VN1 386 aa17.65■□□□□ 0.42
CBX4-204ENST00000495122 RNF10Q8N5U6 811 aaKnown RBP17.65■□□□□ 0.42
CBX4-204ENST00000495122 CCDC155Q8N6L0 562 aa17.65■□□□□ 0.42
CBX4-204ENST00000495122 TRIM58Q8NG06 486 aa17.65■□□□□ 0.42
CBX4-204ENST00000495122 SEPT1Q8WYJ6 367 aa17.65■□□□□ 0.42
CBX4-204ENST00000495122 KIAA1586Q9HCI6 787 aa17.65■□□□□ 0.42
CBX4-204ENST00000495122 TRMT13Q9NUP7 481 aaKnown RBP17.65■□□□□ 0.42
CBX4-204ENST00000495122 CDC23Q9UJX2 597 aa17.65■□□□□ 0.42
CBX4-204ENST00000495122 PCDHA13Q9Y5I0 950 aa17.65■□□□□ 0.42
CBX4-204ENST00000495122 SLC16A4O15374 487 aa17.64■□□□□ 0.41
CBX4-204ENST00000495122 MMP3P08254 477 aa17.64■□□□□ 0.41
CBX4-204ENST00000495122 GTF2H1P32780 548 aa17.64■□□□□ 0.41
CBX4-204ENST00000495122 CCL23P55773 120 aa17.64■□□□□ 0.41
CBX4-204ENST00000495122 JAM2P57087 298 aa17.64■□□□□ 0.41
CBX4-204ENST00000495122 MYL7Q01449 175 aa17.64■□□□□ 0.41
CBX4-204ENST00000495122 NCBP1Q09161 790 aaKnown RBP17.64■□□□□ 0.41
CBX4-204ENST00000495122 NBPF20Q3BBV1 942 aa17.64■□□□□ 0.41
CBX4-204ENST00000495122 TDRD12Q587J7 1177 aaKnown RBP17.64■□□□□ 0.41
CBX4-204ENST00000495122 SMYD5Q6GMV2 418 aa17.64■□□□□ 0.41
CBX4-204ENST00000495122 NFRKBQ6P4R8 1299 aa17.64■□□□□ 0.41
CBX4-204ENST00000495122 SEPT14Q6ZU15 432 aa17.64■□□□□ 0.41
CBX4-204ENST00000495122 SLC35F6Q8N357 371 aa17.64■□□□□ 0.41
CBX4-204ENST00000495122 TMC2Q8TDI7 906 aa17.64■□□□□ 0.41
CBX4-204ENST00000495122 MYLIPQ8WY64 445 aa17.64■□□□□ 0.41
CBX4-204ENST00000495122 HERVK_113Q902F9 699 aa17.64■□□□□ 0.41
CBX4-204ENST00000495122 VWCEQ96DN2 955 aa17.64■□□□□ 0.41
CBX4-204ENST00000495122 JPH2Q9BR39 696 aaPredicted RBP17.64■□□□□ 0.41
CBX4-204ENST00000495122 CRACR2AQ9BSW2 395 aa17.64■□□□□ 0.41
CBX4-204ENST00000495122 DHX33Q9H6R0 707 aaKnown RBP17.64■□□□□ 0.41
CBX4-204ENST00000495122 BCAS3Q9H6U6 928 aa17.64■□□□□ 0.41
CBX4-204ENST00000495122 NLRC4Q9NPP4 1024 aa17.64■□□□□ 0.41
CBX4-204ENST00000495122 HSPBP1Q9NZL4 362 aa17.64■□□□□ 0.41
CBX4-204ENST00000495122 ARHGAP28Q9P2N2 729 aa17.64■□□□□ 0.41
CBX4-204ENST00000495122 CUL9Q8IWT3 2517 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 NLRC5Q86WI3 1866 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 CCDC169A6NNP5 214 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 BTNL10A8MVZ5 291 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 FANCGO15287 622 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 TACC1O75410 805 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 LGR5O75473 907 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 GH1P01241 217 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 CYP2C9P11712 490 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 NAMPTP43490 491 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 VAMP7P51809 220 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 POLGP54098 1239 aaPredicted RBP17.63■□□□□ 0.41
CBX4-204ENST00000495122 SP2Q02086 613 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 PTPN11Q06124 597 aaPredicted RBP17.63■□□□□ 0.41
CBX4-204ENST00000495122 KLHL30Q0D2K2 578 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 RAPGEF1Q13905 1077 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 EMC2Q15006 297 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 SLC18A3Q16572 532 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 LY6KQ17RY6 165 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 PPP1R13LQ8WUF5 828 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 SLC7A3Q8WY07 619 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 SECISBP2LQ93073 1101 aaKnown RBP17.63■□□□□ 0.41
CBX4-204ENST00000495122 FBXL18Q96ME1 805 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 ALS2CR12Q96Q35 445 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 STK33Q9BYT3 514 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 POLD4Q9HCU8 107 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 SIX2Q9NPC8 291 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 XPNPEP1Q9NQW7 623 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 GUCA1BQ9UMX6 200 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 EMSYQ7Z589 1322 aa17.63■□□□□ 0.41
CBX4-204ENST00000495122 DENND3A2RUS2 1198 aa17.62■□□□□ 0.41
CBX4-204ENST00000495122 GRXCR1A8MXD5 290 aa17.62■□□□□ 0.41
CBX4-204ENST00000495122 TADA3O75528 432 aa17.62■□□□□ 0.41
CBX4-204ENST00000495122 PIGRP01833 764 aa17.62■□□□□ 0.41
CBX4-204ENST00000495122 SLC9A1P19634 815 aa17.62■□□□□ 0.41
CBX4-204ENST00000495122 STAT1P42224 750 aa17.62■□□□□ 0.41
CBX4-204ENST00000495122 MAGEA1P43355 309 aa17.62■□□□□ 0.41
CBX4-204ENST00000495122 FAM47CQ5HY64 1035 aa17.62■□□□□ 0.41
CBX4-204ENST00000495122 MAEAQ7L5Y9 396 aa17.62■□□□□ 0.41
CBX4-204ENST00000495122 PLPPR4Q7Z2D5 763 aa17.62■□□□□ 0.41
CBX4-204ENST00000495122 PDCL2Q8N4E4 241 aa17.62■□□□□ 0.41
CBX4-204ENST00000495122 AFG1LQ8WV93 481 aa17.62■□□□□ 0.41
CBX4-204ENST00000495122 TIFAQ96CG3 184 aa17.62■□□□□ 0.41
CBX4-204ENST00000495122 SCLYQ96I15 445 aa17.62■□□□□ 0.41
CBX4-204ENST00000495122 RPGRIP1Q96KN7 1286 aa17.62■□□□□ 0.41
CBX4-204ENST00000495122 FAM81BQ96LP2 452 aa17.62■□□□□ 0.41
CBX4-204ENST00000495122 PBX4Q9BYU1 374 aa17.62■□□□□ 0.41
CBX4-204ENST00000495122 POLR3FQ9H1D9 316 aaPredicted RBP17.62■□□□□ 0.41
CBX4-204ENST00000495122 AZI2Q9H6S1 392 aa17.62■□□□□ 0.41
CBX4-204ENST00000495122 CXXC1Q9P0U4 656 aaPredicted RBP17.62■□□□□ 0.41
CBX4-204ENST00000495122 DDX41Q9UJV9 622 aaKnown RBP17.62■□□□□ 0.41
CBX4-204ENST00000495122 GSTTP1A0A1W2PQM5 241 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms