RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 DCXO43602 365 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 SOD2P04179 222 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 PLA2G4BP0C869 781 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 SPATA31D3P0C874 917 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 HARSP12081 509 aaKnown RBP11.68□□□□□ -0.54
NELFE-213ENST00000494956 RPL17P18621 184 aaKnown RBP11.68□□□□□ -0.54
NELFE-213ENST00000494956 SYT1P21579 422 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 KLRC2P26717 231 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 CLCN4P51793 760 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 CEBPZQ03701 1054 aaKnown RBP11.68□□□□□ -0.54
NELFE-213ENST00000494956 GRIK3Q13003 919 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 DMP1Q13316 513 aaPredicted RBP11.68□□□□□ -0.54
NELFE-213ENST00000494956 CBX2Q14781 532 aaPredicted RBP11.68□□□□□ -0.54
NELFE-213ENST00000494956 NAB2Q15742 525 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 ARSHQ5FYA8 562 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 ARL6IP4Q66PJ3 421 aaKnown RBP11.68□□□□□ -0.54
NELFE-213ENST00000494956 FUT10Q6P4F1 479 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 PRSS55Q6UWB4 352 aaPredicted RBP11.68□□□□□ -0.54
NELFE-213ENST00000494956 SPATA31D4Q6ZUB0 917 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 HACE1Q8IYU2 909 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 SYT2Q8N9I0 419 aaPredicted RBP11.68□□□□□ -0.54
NELFE-213ENST00000494956 TMEM87AQ8NBN3 555 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 SPOCK2Q92563 424 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 CDK5RAP3Q96JB5 506 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 ACO2Q99798 780 aaKnown RBP11.68□□□□□ -0.54
NELFE-213ENST00000494956 ADPGKQ9BRR6 497 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 CDT1Q9H211 546 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 GOLGA2P5Q9HBQ8 144 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 KMT5AQ9NQR1 393 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 TSHZ2Q9NRE2 1034 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 MRPL17Q9NRX2 175 aaKnown RBP11.68□□□□□ -0.54
NELFE-213ENST00000494956 BLOC1S4Q9NUP1 217 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 ARHGAP28Q9P2N2 729 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 STK24Q9Y6E0 443 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 MYH15Q9Y2K3 1946 aa11.68□□□□□ -0.54
NELFE-213ENST00000494956 MYO10Q9HD67 2058 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 CITO14578 2027 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 PHLPP2Q6ZVD8 1323 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 ABLIM1O14639 778 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 TEX28O15482 410 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 MEFVO15553 781 aaPredicted RBP11.67□□□□□ -0.54
NELFE-213ENST00000494956 GPR37L1O60883 481 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 KIF4AO95239 1232 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 URODP06132 367 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 SRGAP2BP0DMP2 458 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 PLCG1P19174 1290 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 GUCY2CP25092 1073 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 EFNA5P52803 228 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 TUSC3Q13454 348 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 MCM6Q14566 821 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 BMS1Q14692 1282 aaKnown RBP11.67□□□□□ -0.54
NELFE-213ENST00000494956 PTPAQ15257 358 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 SEZ6Q53EL9 994 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 KIAA0319Q5VV43 1072 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 TMC5Q6UXY8 1006 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 BRAPQ7Z569 592 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 EPSTI1Q96J88 318 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 DRC1Q96MC2 740 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 CLIC6Q96NY7 704 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 POP1Q99575 1024 aaKnown RBP11.67□□□□□ -0.54
NELFE-213ENST00000494956 COLEC11Q9BWP8 271 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 NT5C3AQ9H0P0 336 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 ADAM7Q9H2U9 754 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 PTPRHQ9HD43 1115 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 ADAM28Q9UKQ2 775 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 TNFSF13BQ9Y275 285 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 GTF3C3Q9Y5Q9 886 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 DOCK6Q96HP0 2047 aa11.67□□□□□ -0.54
NELFE-213ENST00000494956 MTCL1Q9Y4B5 1905 aaKnown RBP11.66□□□□□ -0.54
NELFE-213ENST00000494956 PDCD11Q14690 1871 aaKnown RBP11.66□□□□□ -0.54
NELFE-213ENST00000494956 DENND4AQ7Z401 1863 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 FSD2A1L4K1 749 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 C2CD4DB7Z1M9 353 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 K7ELQ4 463 aaPredicted RBP11.66□□□□□ -0.54
NELFE-213ENST00000494956 TADA2AO75478 443 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 THP07101 528 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 ALADP13716 330 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 PLS3P13797 630 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 HOXB8P17481 243 aaPredicted RBP11.66□□□□□ -0.54
NELFE-213ENST00000494956 GLUD2P49448 558 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 DSG1Q02413 1049 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 SOX4Q06945 474 aaPredicted RBP11.66□□□□□ -0.54
NELFE-213ENST00000494956 GIT2Q14161 759 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 HSP90AA2PQ14568 343 aaPredicted RBP11.66□□□□□ -0.54
NELFE-213ENST00000494956 DCAF4L1Q3SXM0 396 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 ZNF568Q3ZCX4 644 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 TPRNQ4KMQ1 711 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 RTP2Q5QGT7 225 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 FOXD4L5Q5VV16 416 aaPredicted RBP11.66□□□□□ -0.54
NELFE-213ENST00000494956 GPBP1Q86WP2 473 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 CEP57Q86XR8 500 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 PALB2Q86YC2 1186 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 TMEM161BQ8NDZ6 487 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 FOXD4L4Q8WXT5 416 aaPredicted RBP11.66□□□□□ -0.54
NELFE-213ENST00000494956 RIN2Q8WYP3 895 aaPredicted RBP11.66□□□□□ -0.54
NELFE-213ENST00000494956 FBXL18Q96ME1 805 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 REEP2Q9BRK0 252 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 EMILIN2Q9BXX0 1053 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 HAPLN2Q9GZV7 340 aa11.66□□□□□ -0.54
NELFE-213ENST00000494956 TMEM134Q9H6X4 195 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms