RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	DSG1	Q02413	1049 aa		11.3	□□□□□ -0.6
NEPRO-222	ENST00000494891	KIAA0319	Q5VV43	1072 aa		11.3	□□□□□ -0.6
NEPRO-222	ENST00000494891	EEF1DP3	Q658K8	133 aa		11.3	□□□□□ -0.6
NEPRO-222	ENST00000494891	ALKAL1	Q6UXT8	129 aa		11.3	□□□□□ -0.6
NEPRO-222	ENST00000494891	ZPBP2	Q6X784	338 aa		11.3	□□□□□ -0.6
NEPRO-222	ENST00000494891	CDR2L	Q86X02	465 aa	Predicted RBP	11.3	□□□□□ -0.6
NEPRO-222	ENST00000494891	RPS6KC1	Q96S38	1066 aa		11.3	□□□□□ -0.6
NEPRO-222	ENST00000494891	PHF7	Q9BWX1	381 aa	Predicted RBP	11.3	□□□□□ -0.6
NEPRO-222	ENST00000494891	EMILIN2	Q9BXX0	1053 aa		11.3	□□□□□ -0.6
NEPRO-222	ENST00000494891	MRPL4	Q9BYD3	311 aa	Known RBP	11.3	□□□□□ -0.6
NEPRO-222	ENST00000494891	ADAM7	Q9H2U9	754 aa		11.3	□□□□□ -0.6
NEPRO-222	ENST00000494891	MRPL17	Q9NRX2	175 aa	Known RBP	11.3	□□□□□ -0.6
NEPRO-222	ENST00000494891	ADAM28	Q9UKQ2	775 aa		11.3	□□□□□ -0.6
NEPRO-222	ENST00000494891	USP15	Q9Y4E8	981 aa	Predicted RBP	11.3	□□□□□ -0.6
NEPRO-222	ENST00000494891	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	CCDC169	A6NNP5	214 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	TOM1L1	O75674	476 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	CSPG5	O95196	566 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	TH	P07101	528 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	MAPT	P10636	758 aa	Known RBP	11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	DDIT3	P35638	169 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	OR1G1	P47890	313 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	NASP	P49321	788 aa	Predicted RBP	11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	GLUD2	P49448	558 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	CLCN4	P51793	760 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	RBM10	P98175	930 aa	Known RBP	11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	GRIN1	Q05586	938 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	SLC39A14	Q15043	492 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	CLUL1	Q15846	466 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	LRRC15	Q8TF66	581 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	HDAC7	Q8WUI4	952 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	RAD54L	Q92698	747 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.29	□□□□□ -0.6	5e-6	■■□□□ 11.5
NEPRO-222	ENST00000494891	NECTIN4	Q96NY8	510 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	KLHL5	Q96PQ7	755 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	PPP1R10	Q96QC0	940 aa	Known RBP	11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	APOL6	Q9BWW8	343 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	ST6GALNAC4	Q9H4F1	302 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	POLD4	Q9HCU8	107 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	TOPORS	Q9NS56	1045 aa	Predicted RBP	11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	SNTG2	Q9NY99	539 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	FNIP2	Q9P278	1114 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	STK17A	Q9UEE5	414 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	PARP2	Q9UGN5	583 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	FBXO2	Q9UK22	296 aa	Predicted RBP	11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	CLIC4	Q9Y696	253 aa		11.29	□□□□□ -0.6
NEPRO-222	ENST00000494891	PIGR	P01833	764 aa		11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	UROD	P06132	367 aa		11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	ADH1A	P07327	375 aa		11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	CNP	P09543	421 aa	Known RBP	11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	KCNE1	P15382	129 aa		11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	PLCG1	P19174	1290 aa		11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	CREM	Q03060	361 aa		11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	USP41	Q3LFD5	358 aa		11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	FUT10	Q6P4F1	479 aa		11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	MPZL3	Q6UWV2	235 aa		11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	CYP26C1	Q6V0L0	522 aa		11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	C15orf39	Q6ZRI6	1047 aa		11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	CMAS	Q8NFW8	434 aa	Predicted RBP	11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	LARP4B	Q92615	738 aa	Known RBP	11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	UROC1	Q96N76	676 aa		11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	FIZ1	Q96SL8	496 aa		11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	REEP2	Q9BRK0	252 aa		11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	GPR62	Q9BZJ7	368 aa		11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	CDT1	Q9H211	546 aa		11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	EPHX3	Q9H6B9	360 aa		11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	KLK14	Q9P0G3	267 aa		11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	DPP7	Q9UHL4	492 aa		11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	PRG3	Q9Y2Y8	225 aa	Predicted RBP	11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	TRIP11	Q15643	1979 aa		11.28	□□□□□ -0.6
NEPRO-222	ENST00000494891	SF3B1	O75533	1304 aa	Known RBP eCLIP	11.28	□□□□□ -0.6	2e-7	■■■■■ 129.2
NEPRO-222	ENST00000494891	MYH15	Q9Y2K3	1946 aa		11.27	□□□□□ -0.6
NEPRO-222	ENST00000494891	CIT	O14578	2027 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	SFI1	A8K8P3	1242 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	SLC16A4	O15374	487 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	DCX	O43602	365 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	SSTR3	P32745	418 aa	Predicted RBP	11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	MTHFR	P42898	656 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	MCL1	Q07820	350 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	ELAVL2	Q12926	359 aa	Known RBP	11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	STRN3	Q13033	797 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	KARS	Q15046	597 aa	Known RBP	11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	ZRSR1	Q15695	479 aa	Known RBP	11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	KYAT1	Q16773	422 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	TMEM132A	Q24JP5	1023 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	ZNF568	Q3ZCX4	644 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	KIAA1841	Q6NSI8	718 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	CES5A	Q6NT32	575 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	PDXDC1	Q6P996	788 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	TAS1R1	Q7RTX1	841 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	GPBP1	Q86WP2	473 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	AUTS2	Q8WXX7	1259 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	FBXL18	Q96ME1	805 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	USP28	Q96RU2	1077 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	TSPAN18	Q96SJ8	248 aa		11.27	□□□□□ -0.61
NEPRO-222	ENST00000494891	CCDC94	Q9BW85	323 aa	Predicted RBP	11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms