RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 MMGT1Q8N4V1 131 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 GPR20Q99678 358 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 SELENOOQ9BVL4 669 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 CELF4Q9BZC1 486 aaKnown RBP11.22□□□□□ -0.61
SAMM50-206ENST00000494795 MINDY3Q9H8M7 445 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 MYPNQ86TC9 1320 aa11.22□□□□□ -0.61
SAMM50-206ENST00000494795 A0A0G2JMZ2 1700 aa11.21□□□□□ -0.61
SAMM50-206ENST00000494795 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.21□□□□□ -0.61
SAMM50-206ENST00000494795 K7ERI5 159 aa11.21□□□□□ -0.61
SAMM50-206ENST00000494795 GJB6O95452 261 aa11.21□□□□□ -0.61
SAMM50-206ENST00000494795 CST3P01034 146 aaPredicted RBP11.21□□□□□ -0.61
SAMM50-206ENST00000494795 TNNI1P19237 187 aa11.21□□□□□ -0.61
SAMM50-206ENST00000494795 CLCN3P51790 818 aa11.21□□□□□ -0.61
SAMM50-206ENST00000494795 PEX26Q7Z412 305 aa11.21□□□□□ -0.61
SAMM50-206ENST00000494795 FAM71AQ8IYT1 594 aa11.21□□□□□ -0.61
SAMM50-206ENST00000494795 ZDHHC14Q8IZN3 488 aa11.21□□□□□ -0.61
SAMM50-206ENST00000494795 MCPH1Q8NEM0 835 aa11.21□□□□□ -0.61
SAMM50-206ENST00000494795 IFT81Q8WYA0 676 aa11.21□□□□□ -0.61
SAMM50-206ENST00000494795 FAM212AQ96EL1 285 aa11.21□□□□□ -0.61
SAMM50-206ENST00000494795 CDHR1Q96JP9 859 aa11.21□□□□□ -0.61
SAMM50-206ENST00000494795 IFT74Q96LB3 600 aa11.21□□□□□ -0.61
SAMM50-206ENST00000494795 ERVK-5Q9HDB9 667 aa11.21□□□□□ -0.61
SAMM50-206ENST00000494795 LAMA2P24043 3122 aaKnown RBP11.21□□□□□ -0.61
SAMM50-206ENST00000494795 GRIN3BO60391 1043 aa11.21□□□□□ -0.62
SAMM50-206ENST00000494795 KRT5P13647 590 aa11.21□□□□□ -0.62
SAMM50-206ENST00000494795 GUCY2DQ02846 1103 aa11.21□□□□□ -0.62
SAMM50-206ENST00000494795 ALCAMQ13740 583 aa11.21□□□□□ -0.62
SAMM50-206ENST00000494795 MYBPC2Q14324 1141 aa11.21□□□□□ -0.62
SAMM50-206ENST00000494795 PASD1Q8IV76 773 aa11.21□□□□□ -0.62
SAMM50-206ENST00000494795 FBXL13Q8NEE6 735 aa11.21□□□□□ -0.62
SAMM50-206ENST00000494795 SLC7A3Q8WY07 619 aa11.21□□□□□ -0.62
SAMM50-206ENST00000494795 TAF1DQ9H5J8 278 aaPredicted RBP11.21□□□□□ -0.62
SAMM50-206ENST00000494795 TMEM8AQ9HCN3 771 aa11.21□□□□□ -0.62
SAMM50-206ENST00000494795 AGO2Q9UKV8 859 aaKnown RBP11.21□□□□□ -0.62
SAMM50-206ENST00000494795 ZHX1Q9UKY1 873 aaPredicted RBP11.21□□□□□ -0.62
SAMM50-206ENST00000494795 NFU1Q9UMS0 254 aa11.21□□□□□ -0.62
SAMM50-206ENST00000494795 KCNH4Q9UQ05 1017 aa11.21□□□□□ -0.62
SAMM50-206ENST00000494795 CLEC11AQ9Y240 323 aa11.21□□□□□ -0.62
SAMM50-206ENST00000494795 AGPSO00116 658 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 CYP11B1P15538 503 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 CFAP221Q4G0U5 840 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 ZNF572Q7Z3I7 529 aaPredicted RBP11.2□□□□□ -0.62
SAMM50-206ENST00000494795 SLFN11Q7Z7L1 901 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 USP38Q8NB14 1042 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 DEPTORQ8TB45 409 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 PSPC1Q8WXF1 523 aaKnown RBP11.2□□□□□ -0.62
SAMM50-206ENST00000494795 CPA5Q8WXQ8 436 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 DDX1Q92499 740 aaKnown RBP11.2□□□□□ -0.62
SAMM50-206ENST00000494795 SHC3Q92529 594 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 SPATA33Q96N06 139 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 MMP19Q99542 508 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 EPB41L5Q9HCM4 733 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 RNF19AQ9NV58 838 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 FAN1Q9Y2M0 1017 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 EVPLQ92817 2033 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 DNAJC25-GNG10A0A024R161 153 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 TCRBV7S2A1N4TA0A589 114 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 DDX3YO15523 660 aaKnown RBP11.2□□□□□ -0.62
SAMM50-206ENST00000494795 CLSTN1O94985 981 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 GUCY2FP51841 1108 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 ERVK-9P63128 1117 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 BRDTQ58F21 947 aaPredicted RBP11.2□□□□□ -0.62
SAMM50-206ENST00000494795 SND1Q7KZF4 910 aaKnown RBP eCLIP11.2□□□□□ -0.62
SAMM50-206ENST00000494795 RNF149Q8NC42 400 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 EXOC7Q9UPT5 735 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 NOC2LQ9Y3T9 749 aaKnown RBP11.2□□□□□ -0.62
SAMM50-206ENST00000494795 O00370 1275 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 SYF2O95926 243 aaKnown RBP11.2□□□□□ -0.62
SAMM50-206ENST00000494795 ITGBL1O95965 494 aaPredicted RBP11.2□□□□□ -0.62
SAMM50-206ENST00000494795 PAFAH1B1P43034 410 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 C8orf74Q6P047 294 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 METTL7BQ6UX53 244 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 HDXQ7Z353 690 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 RHPN2Q8IUC4 686 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 CASKIN2Q8WXE0 1202 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 SEPT1Q8WYJ6 367 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 NLRP4Q96MN2 994 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 TIPINQ9BVW5 301 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 NIFKQ9BYG3 293 aaKnown RBP11.2□□□□□ -0.62
SAMM50-206ENST00000494795 NEUROG2Q9H2A3 272 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 PNMA2Q9UL42 364 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 HPCAL4Q9UM19 191 aa11.2□□□□□ -0.62
SAMM50-206ENST00000494795 LRRC37A2A6NM11 1700 aa11.19□□□□□ -0.62
SAMM50-206ENST00000494795 ERICH4A6NGS2 130 aa11.19□□□□□ -0.62
SAMM50-206ENST00000494795 ADCY6O43306 1168 aa11.19□□□□□ -0.62
SAMM50-206ENST00000494795 HEXIM1O94992 359 aaKnown RBP11.19□□□□□ -0.62
SAMM50-206ENST00000494795 HLA-DRAP01903 254 aa11.19□□□□□ -0.62
SAMM50-206ENST00000494795 C4BPAP04003 597 aaKnown RBP11.19□□□□□ -0.62
SAMM50-206ENST00000494795 ZNF286BP0CG31 522 aa11.19□□□□□ -0.62
SAMM50-206ENST00000494795 TXNP10599 105 aaKnown RBP11.19□□□□□ -0.62
SAMM50-206ENST00000494795 FLT3P36888 993 aa11.19□□□□□ -0.62
SAMM50-206ENST00000494795 GPC3P51654 580 aa11.19□□□□□ -0.62
SAMM50-206ENST00000494795 BIRC3Q13489 604 aa11.19□□□□□ -0.62
SAMM50-206ENST00000494795 MESDQ14696 234 aa11.19□□□□□ -0.62
SAMM50-206ENST00000494795 PLCB4Q15147 1175 aa11.19□□□□□ -0.62
SAMM50-206ENST00000494795 CELF3Q5SZQ8 465 aaKnown RBP11.19□□□□□ -0.62
SAMM50-206ENST00000494795 CCDC62Q6P9F0 684 aa11.19□□□□□ -0.62
SAMM50-206ENST00000494795 C15orf39Q6ZRI6 1047 aa11.19□□□□□ -0.62
SAMM50-206ENST00000494795 VPS36Q86VN1 386 aa11.19□□□□□ -0.62
SAMM50-206ENST00000494795 CTNNBL1Q8WYA6 563 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms